| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fabH [H]
Identifier: 86749767
GI number: 86749767
Start: 3029254
End: 3030231
Strand: Direct
Name: fabH [H]
Synonym: RPB_2650
Alternate gene names: 86749767
Gene position: 3029254-3030231 (Clockwise)
Preceding gene: 86749766
Following gene: 86749768
Centisome position: 56.82
GC content: 67.48
Gene sequence:
>978_bases GTGACGGTGGTTCGTTCGGTCGTGCTGGGCTGCGGCGCTTATCTGCCGGAGCGGATTCTCACCAACGCCGAACTGGCCGC GACCGTCGACACCTCGGACGAGTGGATCGTGCAGCGCACCGGCATCCGGGAGCGCCACATCGCCGCCGAGGGCGAGTACA CCTCGCATCTCGCCACCAAAGCGGCGCAGGCCGCGCTCGACGACGCCGGGCTCACGGCGGATCAGATCGATCTAATCGTG CTGGCGACATCGACACCGGACCACACCTTTCCGGCGACCGCGGTGCAGGTCCAGGCCGCGCTCGGCATGACCCACGGCGT CGCCTTCGATCTGCAGGCGGTGTGCTCCGGCTTCGTCTTCGCGGTCGCCACCGCCGACAACTTCCTGCGCGGTGGATCGG CCAAGCGTGCGCTGGTGATCGGCGCCGAAACCTTCTCGCGCATCCTCGACTGGAACGACCGCGGCACCTGCGTGCTGTTC GGCGACGGCGCCGGCGCGATCGTGCTGGAAGCGCAGGAAGGCTGGGGCACCTCGGCCGACCGCGGCGTGCTGACGACGCA TCTGCGCTCCGACGGCCGCCACAAGCACAAATTGTATGTCGACGGCGGGCCGAGCTCGACGCAGACCGTCGGCCATCTCC GCATGGAAGGCCGCGAAGTGTTCAAGCACGCGGTCGGGATGATCACCGGGGTGATCATCGATGCATTCAACGCCAGCGGC ACCAGCGCCGACAATGTCGACTGGTTCGTGCCGCATCAAGCCAACAAGCGCATCATCGACGCTTCGGCGCAAAAACTCCA TATTGCGCCGCAGAAGGTGGTGATGACCGTGGACCGCCACGGCAACACATCGGCCGCCTCGATTCCGCTGGCGCTGGCCG CGGCGGTGGCCGACGGTCGCATCCAGAAGGGCCATCTGGTGCTGCTGGAAGCCATGGGCGGCGGCTTCACCTGGGGCTCG GCACTGCTGCGCTGGTAG
Upstream 100 bases:
>100_bases ATGACATGGTTCGCTACGATCTCCTGACCAAGATCAATCAAACGCTCAATCGTGAAGCCGGCGCGCTGGTCTCGACGCCG ACGGCGCAGGAGGCTGTCTC
Downstream 100 bases:
>100_bases TTGCGCGTGTAAAATTTTAACAGCATTTCCATTGCGTTCCATGCTATTCTGAATGTCGGCGGAGGTTGACCGCCGATTGT TAACCTCATAGTTTCAGCAC
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTVVRSVVLGCGAYLPERILTNAELAATVDTSDEWIVQRTGIRERHIAAEGEYTSHLATKAAQAALDDAGLTADQIDLIV LATSTPDHTFPATAVQVQAALGMTHGVAFDLQAVCSGFVFAVATADNFLRGGSAKRALVIGAETFSRILDWNDRGTCVLF GDGAGAIVLEAQEGWGTSADRGVLTTHLRSDGRHKHKLYVDGGPSSTQTVGHLRMEGREVFKHAVGMITGVIIDAFNASG TSADNVDWFVPHQANKRIIDASAQKLHIAPQKVVMTVDRHGNTSAASIPLALAAAVADGRIQKGHLVLLEAMGGGFTWGS ALLRW
Sequences:
>Translated_325_residues MTVVRSVVLGCGAYLPERILTNAELAATVDTSDEWIVQRTGIRERHIAAEGEYTSHLATKAAQAALDDAGLTADQIDLIV LATSTPDHTFPATAVQVQAALGMTHGVAFDLQAVCSGFVFAVATADNFLRGGSAKRALVIGAETFSRILDWNDRGTCVLF GDGAGAIVLEAQEGWGTSADRGVLTTHLRSDGRHKHKLYVDGGPSSTQTVGHLRMEGREVFKHAVGMITGVIIDAFNASG TSADNVDWFVPHQANKRIIDASAQKLHIAPQKVVMTVDRHGNTSAASIPLALAAAVADGRIQKGHLVLLEAMGGGFTWGS ALLRW >Mature_324_residues TVVRSVVLGCGAYLPERILTNAELAATVDTSDEWIVQRTGIRERHIAAEGEYTSHLATKAAQAALDDAGLTADQIDLIVL ATSTPDHTFPATAVQVQAALGMTHGVAFDLQAVCSGFVFAVATADNFLRGGSAKRALVIGAETFSRILDWNDRGTCVLFG DGAGAIVLEAQEGWGTSADRGVLTTHLRSDGRHKHKLYVDGGPSSTQTVGHLRMEGREVFKHAVGMITGVIIDAFNASGT SADNVDWFVPHQANKRIIDASAQKLHIAPQKVVMTVDRHGNTSAASIPLALAAAVADGRIQKGHLVLLEAMGGGFTWGSA LLRW
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=319, Percent_Identity=49.8432601880878, Blast_Score=314, Evalue=5e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 34370; Mature: 34239
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVRSVVLGCGAYLPERILTNAELAATVDTSDEWIVQRTGIRERHIAAEGEYTSHLATK CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCHHEEECCCCHHHHHHHH AAQAALDDAGLTADQIDLIVLATSTPDHTFPATAVQVQAALGMTHGVAFDLQAVCSGFVF HHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHEEHHHHHCCCCCHHEEHHHHHCCCEE AVATADNFLRGGSAKRALVIGAETFSRILDWNDRGTCVLFGDGAGAIVLEAQEGWGTSAD EEEEHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCC RGVLTTHLRSDGRHKHKLYVDGGPSSTQTVGHLRMEGREVFKHAVGMITGVIIDAFNASG CCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TSADNVDWFVPHQANKRIIDASAQKLHIAPQKVVMTVDRHGNTSAASIPLALAAAVADGR CCCCCCEEECCCCCCCEEEECCCCEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHCCC IQKGHLVLLEAMGGGFTWGSALLRW CCCCCEEEEEECCCCEEHHHHHHCC >Mature Secondary Structure TVVRSVVLGCGAYLPERILTNAELAATVDTSDEWIVQRTGIRERHIAAEGEYTSHLATK HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCHHEEECCCCHHHHHHHH AAQAALDDAGLTADQIDLIVLATSTPDHTFPATAVQVQAALGMTHGVAFDLQAVCSGFVF HHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCHHEEHHHHHCCCCCHHEEHHHHHCCCEE AVATADNFLRGGSAKRALVIGAETFSRILDWNDRGTCVLFGDGAGAIVLEAQEGWGTSAD EEEEHHHHHCCCCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCCCCC RGVLTTHLRSDGRHKHKLYVDGGPSSTQTVGHLRMEGREVFKHAVGMITGVIIDAFNASG CCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TSADNVDWFVPHQANKRIIDASAQKLHIAPQKVVMTVDRHGNTSAASIPLALAAAVADGR CCCCCCEEECCCCCCCEEEECCCCEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHHCCC IQKGHLVLLEAMGGGFTWGSALLRW CCCCCEEEEEECCCCEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]