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The map label for this gene is 86749723

Identifier: 86749723

GI number: 86749723

Start: 2989033

End: 2989635

Strand: Reverse

Name: 86749723

Synonym: RPB_2605

Alternate gene names: NA

Gene position: 2989635-2989033 (Counterclockwise)

Preceding gene: 86749724

Following gene: 86749718

Centisome position: 56.07

GC content: 67.5

Gene sequence:

>603_bases
ATGTGTCCCAGGCTCGCGGAGTTCCGCCACGAGCTTCGGGCGCGCGAGCCCGGCTGGCACAATGCGCCGGTGCCCTCGTT
CGGCGATGCCGATGCCGCGCTGCTGATCGTCGGTCTCGCACCCGGCGTGCAAGGGGCCAATCGGACCGGCCGTCCGTTCA
CCGGCGACTATGCCGGCGATCTGCTCTATGCGACATTGATCGACTACGGCTTTGCGACGGGCCAATTCCAGGCTCGCCCC
GACGACGGGCTGCGTCTCGTGGGCTGCCGGATCAGCAATGCGGTGCGCTGCGTGCCGCCGCAGAACAAGCCCCTGCCCGT
CGAGATCAACACCTGCCGGCGCTTTCTGGCCGCCACGATCGAAACCATGCCGAAGCTGCGCGCGATCGTGCTGCTCGGCC
GGATCGCGCATGATTCGACGCTGAAGGCCCTCGGCCTTCGGGCCTCACAGGCACCGTTCGGACACGGCGCGGTCCACGAC
GCCGGGGCGCTGCGGCTGTACGACAGCTATCATTGCTCGCGCTACAACACCAACACCCGCGTGTTGACGCCGAAGATGTT
TCAAGACGTGTTCGCGCGGGTGCGCGCCGATCTGGACGCGTAG

Upstream 100 bases:

>100_bases
AGGGGCGGTGACGACGATTTTGAAGACTGAGATGGCTGCGACGCGCGGCCCACGGGCCGGCGTCCTTCGTCCGATCACCG
AACCCGATCGGGATTGCCCG

Downstream 100 bases:

>100_bases
TCGCGCCGAGCGGCTGTCCTGCGCAGCGCCTCAGCCCCGCGCCCGCAGCAATCGTCCCTTCTCGCGACTCCAGTCGCGCT
TCTTCTCGGTCTCGCGCTTG

Product: uracil-DNA glycosylase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MCPRLAEFRHELRAREPGWHNAPVPSFGDADAALLIVGLAPGVQGANRTGRPFTGDYAGDLLYATLIDYGFATGQFQARP
DDGLRLVGCRISNAVRCVPPQNKPLPVEINTCRRFLAATIETMPKLRAIVLLGRIAHDSTLKALGLRASQAPFGHGAVHD
AGALRLYDSYHCSRYNTNTRVLTPKMFQDVFARVRADLDA

Sequences:

>Translated_200_residues
MCPRLAEFRHELRAREPGWHNAPVPSFGDADAALLIVGLAPGVQGANRTGRPFTGDYAGDLLYATLIDYGFATGQFQARP
DDGLRLVGCRISNAVRCVPPQNKPLPVEINTCRRFLAATIETMPKLRAIVLLGRIAHDSTLKALGLRASQAPFGHGAVHD
AGALRLYDSYHCSRYNTNTRVLTPKMFQDVFARVRADLDA
>Mature_200_residues
MCPRLAEFRHELRAREPGWHNAPVPSFGDADAALLIVGLAPGVQGANRTGRPFTGDYAGDLLYATLIDYGFATGQFQARP
DDGLRLVGCRISNAVRCVPPQNKPLPVEINTCRRFLAATIETMPKLRAIVLLGRIAHDSTLKALGLRASQAPFGHGAVHD
AGALRLYDSYHCSRYNTNTRVLTPKMFQDVFARVRADLDA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML1105 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 21869; Mature: 21869

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCPRLAEFRHELRAREPGWHNAPVPSFGDADAALLIVGLAPGVQGANRTGRPFTGDYAGD
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHH
LLYATLIDYGFATGQFQARPDDGLRLVGCRISNAVRCVPPQNKPLPVEINTCRRFLAATI
HHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCEEECCCCCCCCCEEHHHHHHHHHHHH
ETMPKLRAIVLLGRIAHDSTLKALGLRASQAPFGHGAVHDAGALRLYDSYHCSRYNTNTR
HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCE
VLTPKMFQDVFARVRADLDA
EECHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCPRLAEFRHELRAREPGWHNAPVPSFGDADAALLIVGLAPGVQGANRTGRPFTGDYAGD
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHH
LLYATLIDYGFATGQFQARPDDGLRLVGCRISNAVRCVPPQNKPLPVEINTCRRFLAATI
HHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCEEECCCCCCCCCEEHHHHHHHHHHHH
ETMPKLRAIVLLGRIAHDSTLKALGLRASQAPFGHGAVHDAGALRLYDSYHCSRYNTNTR
HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCE
VLTPKMFQDVFARVRADLDA
EECHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]