| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749718
Identifier: 86749718
GI number: 86749718
Start: 2982463
End: 2982804
Strand: Reverse
Name: 86749718
Synonym: RPB_2600
Alternate gene names: NA
Gene position: 2982804-2982463 (Counterclockwise)
Preceding gene: 86749723
Following gene: 86749689
Centisome position: 55.95
GC content: 67.25
Gene sequence:
>342_bases ATGCGTCACAAACCCATGGTATCAACCGCCCGCCGGCCCGGCGCGGCGGCAGCGCACGCGCTGACCGGGCGCGCGACCGA GGAGACGACAATGCGCAAGACACTGCTGGTCGGGGTGCTGACCCTGCTGGGGTTGACCGGGATCGCGGAGGCTCGCGACT ATCCTGTCTGCCTGCGGGTCTATCACAACTACCGCGACTGGTACGACGAGTGCAGCTACACGTCGATCCCGCAATGCCGG ATGTCCGCCTCCGGCCGCGCCGCCGAATGTATCGAAAACCCGTGGTACACCGCGCCGCAGCCCGCGAAGAAGAAGCTGCG CAAGCAACGCCGCCGGCACTGA
Upstream 100 bases:
>100_bases ATCCGGTCTGCCTGCGGATCTACGGTCCGGTGCGGTTCGACCAGTGCCGCTATGTCTCGATCGAGCAATGCCAGCCGGCC GCCCAGGGCATCGCCGGGCA
Downstream 100 bases:
>100_bases GGTGCCGGGGCATAGCGTGACCGAGGGACCGGAGTGCCGCGCGCCCGATCGCCCTGCTGTGTCCGCCCCCACGTCCCAGC GTCATCGCCCGGCTTTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MRHKPMVSTARRPGAAAAHALTGRATEETTMRKTLLVGVLTLLGLTGIAEARDYPVCLRVYHNYRDWYDECSYTSIPQCR MSASGRAAECIENPWYTAPQPAKKKLRKQRRRH
Sequences:
>Translated_113_residues MRHKPMVSTARRPGAAAAHALTGRATEETTMRKTLLVGVLTLLGLTGIAEARDYPVCLRVYHNYRDWYDECSYTSIPQCR MSASGRAAECIENPWYTAPQPAKKKLRKQRRRH >Mature_113_residues MRHKPMVSTARRPGAAAAHALTGRATEETTMRKTLLVGVLTLLGLTGIAEARDYPVCLRVYHNYRDWYDECSYTSIPQCR MSASGRAAECIENPWYTAPQPAKKKLRKQRRRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12861; Mature: 12861
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHKPMVSTARRPGAAAAHALTGRATEETTMRKTLLVGVLTLLGLTGIAEARDYPVCLRV CCCCCCCHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH YHNYRDWYDECSYTSIPQCRMSASGRAAECIENPWYTAPQPAKKKLRKQRRRH HHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRHKPMVSTARRPGAAAAHALTGRATEETTMRKTLLVGVLTLLGLTGIAEARDYPVCLRV CCCCCCCHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH YHNYRDWYDECSYTSIPQCRMSASGRAAECIENPWYTAPQPAKKKLRKQRRRH HHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA