| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749621
Identifier: 86749621
GI number: 86749621
Start: 2863041
End: 2864807
Strand: Reverse
Name: 86749621
Synonym: RPB_2501
Alternate gene names: NA
Gene position: 2864807-2863041 (Counterclockwise)
Preceding gene: 86749623
Following gene: 86749620
Centisome position: 53.73
GC content: 67.97
Gene sequence:
>1767_bases ATGCGGGTGAACGAGTTTCGCGGTTGCGACACTCATCTGAGATCAATCAAAAGATTCGAGGACCACCGCGTGCGCCTGGA ACAACCGACGATGCCGCGCGCAAGCGCTCCGCGAACCGGACCGATTTTCAAAGCCGCATGGCGCGCCGGGATTCTGACGG CGGCGGGCGTCTTCGCACTGTCCTCCGAGGCTCATGCCGCGAACTGGTGGTGGCCCGAGAACGACGACGCGGTCTACATC CCGGCGCAGCCGGCGCCCAAGCGGTATCAACGGAAGCAGCCGCATCTCGATACGCGGCAGCAGAAGCTGATCGAGAAGCC GACCGCCAAGCCGCAGGGGCCGCTGGTGATCGCGGTGTCGATCGAGCAGCAAAAGATGCGCGTCTACGACGCCAACGGCT TCTTCGCCGAGGCGCCGATCTCCACCGGGATGCGCGGCCACGCCACGCCGATGGGCGTGTTCAGCGTCATCCAGAAAAAC AAATGGCACCGCTCCAACATCTACAGCGGCGCGCCGATGCCCTACATGCAGCGCCTGACATGGTCGGGCATCGCGCTCCA TGCCGGCGTGGTGCCGGGCTACCCGGCTTCGCATGGCTGCATCCGGATGCCGACATCGTTTGCGACGAAGATGTGGGGCT GGACCCGGATGGGGGCCCGCGTGATCGTCACGCCCGGCGACATCACGCCGACCCACTTCACCCACCCATTGCTGACAGCC AAACGGCCCGCGCCGGCGGACGCGCCGATGGCCTCCGATCCGCAGAAGCCGGGCACGGCGCCGAAATCCGACAAGGCCGC GACGGCCGAACCGGCCGCCGCCCCCGCCGCCGGACTGCATCCGGAACTGCGTGCCGGCATCCTGGGCGACGCCCCCCGCC CGCCGGTCCAGACCGCCGACGCCAGCGCGGCGGACCCTGGCGCCGCGCTCGTGCTGTCCGACTCGCCGGCGCGAGAAAAC GCCTCGGCAGAGCCAGCCCCCGCGACGAGCCCGGCCGACGCCCACGCCGAAGCGACAGTCGACTCGATCGCCAAGGACGA GGCCGCCGAGCCCACCGCCGCCGTTGCCAAGGACATCGCCGAAGCGACCGAAGCCCGGCCGGACGACCTCGATCCCGCGA CCACCGCCACCGTCGTCATCGCTCCCGGATCCCCTCCCCAAGCGACCGAAAAAGCGCCTTCTTCCAATGAGAAGGCGCCA TCCGTTGAGTCCGCGGACAAGCTCGACGGCAAGCCGGATGCCGCCAGCCAGAGCAGCGCCCCGGGCAAGGATCAGTCGCG CCCGGGCGATCCGGCTGCGCCGCCGGCGGCAGAATTGCCGGCAGCCAAGCGCGGCGGCGGCCAGATTGCGATGTTCGTCA GCGCCAAGGACCAGAAGCTCTACGTCCGTCAGAACATGACACCGTTGTTCGACGTTCCGGTGGTGATCGCGGCAGGCGAG CGGCCGCTGGGGACGCATGTGTTTACCGCCGAGCTGGCGAAGGATGACGGCGTTCGCTGGACGGTGGTGTCGCTGCCGGC ACCGCAACGGGTCAATGATGCGGGCAATTCCCGCCGATCCAAGAAGACCTTGCCGACACCTGTGAAAGCATCGGTGGAAA CAGAAGGCCCCGCCGCAGCGCTCGATCGCCTGACAATTCCCGCCGAAGCCATGGCGCGGATCGCCGACGCGATCACCACC GGAACATCGTTCATCGTCTCCGATCAGGGCATCACTGCGAGCGGCGAAACCGGCCGGGGGACCGATTTCATCATCAGCCT GCGGTAG
Upstream 100 bases:
>100_bases ACACAGTTGTGAAAGATGCTGGCGCCCTACGACTCTCGTTTAACCTCCTGTGAAGCTTTTTTGTTAGGCTTTGAATCGAT TGTGCGGAGATTCCGCTCCA
Downstream 100 bases:
>100_bases CTTCGTCCTTCGCCTTCTGCGGCCGCGCGTCCGCCCGATCGGTCGGCCAAGGCTGTGACCGCCGTGCGCCTCCAGGCGTT CGAATCTGCGGGCAACTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Family; Protein ErfK Family
Number of amino acids: Translated: 588; Mature: 588
Protein sequence:
>588_residues MRVNEFRGCDTHLRSIKRFEDHRVRLEQPTMPRASAPRTGPIFKAAWRAGILTAAGVFALSSEAHAANWWWPENDDAVYI PAQPAPKRYQRKQPHLDTRQQKLIEKPTAKPQGPLVIAVSIEQQKMRVYDANGFFAEAPISTGMRGHATPMGVFSVIQKN KWHRSNIYSGAPMPYMQRLTWSGIALHAGVVPGYPASHGCIRMPTSFATKMWGWTRMGARVIVTPGDITPTHFTHPLLTA KRPAPADAPMASDPQKPGTAPKSDKAATAEPAAAPAAGLHPELRAGILGDAPRPPVQTADASAADPGAALVLSDSPAREN ASAEPAPATSPADAHAEATVDSIAKDEAAEPTAAVAKDIAEATEARPDDLDPATTATVVIAPGSPPQATEKAPSSNEKAP SVESADKLDGKPDAASQSSAPGKDQSRPGDPAAPPAAELPAAKRGGGQIAMFVSAKDQKLYVRQNMTPLFDVPVVIAAGE RPLGTHVFTAELAKDDGVRWTVVSLPAPQRVNDAGNSRRSKKTLPTPVKASVETEGPAAALDRLTIPAEAMARIADAITT GTSFIVSDQGITASGETGRGTDFIISLR
Sequences:
>Translated_588_residues MRVNEFRGCDTHLRSIKRFEDHRVRLEQPTMPRASAPRTGPIFKAAWRAGILTAAGVFALSSEAHAANWWWPENDDAVYI PAQPAPKRYQRKQPHLDTRQQKLIEKPTAKPQGPLVIAVSIEQQKMRVYDANGFFAEAPISTGMRGHATPMGVFSVIQKN KWHRSNIYSGAPMPYMQRLTWSGIALHAGVVPGYPASHGCIRMPTSFATKMWGWTRMGARVIVTPGDITPTHFTHPLLTA KRPAPADAPMASDPQKPGTAPKSDKAATAEPAAAPAAGLHPELRAGILGDAPRPPVQTADASAADPGAALVLSDSPAREN ASAEPAPATSPADAHAEATVDSIAKDEAAEPTAAVAKDIAEATEARPDDLDPATTATVVIAPGSPPQATEKAPSSNEKAP SVESADKLDGKPDAASQSSAPGKDQSRPGDPAAPPAAELPAAKRGGGQIAMFVSAKDQKLYVRQNMTPLFDVPVVIAAGE RPLGTHVFTAELAKDDGVRWTVVSLPAPQRVNDAGNSRRSKKTLPTPVKASVETEGPAAALDRLTIPAEAMARIADAITT GTSFIVSDQGITASGETGRGTDFIISLR >Mature_588_residues MRVNEFRGCDTHLRSIKRFEDHRVRLEQPTMPRASAPRTGPIFKAAWRAGILTAAGVFALSSEAHAANWWWPENDDAVYI PAQPAPKRYQRKQPHLDTRQQKLIEKPTAKPQGPLVIAVSIEQQKMRVYDANGFFAEAPISTGMRGHATPMGVFSVIQKN KWHRSNIYSGAPMPYMQRLTWSGIALHAGVVPGYPASHGCIRMPTSFATKMWGWTRMGARVIVTPGDITPTHFTHPLLTA KRPAPADAPMASDPQKPGTAPKSDKAATAEPAAAPAAGLHPELRAGILGDAPRPPVQTADASAADPGAALVLSDSPAREN ASAEPAPATSPADAHAEATVDSIAKDEAAEPTAAVAKDIAEATEARPDDLDPATTATVVIAPGSPPQATEKAPSSNEKAP SVESADKLDGKPDAASQSSAPGKDQSRPGDPAAPPAAELPAAKRGGGQIAMFVSAKDQKLYVRQNMTPLFDVPVVIAAGE RPLGTHVFTAELAKDDGVRWTVVSLPAPQRVNDAGNSRRSKKTLPTPVKASVETEGPAAALDRLTIPAEAMARIADAITT GTSFIVSDQGITASGETGRGTDFIISLR
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62024; Mature: 62024
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVNEFRGCDTHLRSIKRFEDHRVRLEQPTMPRASAPRTGPIFKAAWRAGILTAAGVFAL CCCCCCCCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC SSEAHAANWWWPENDDAVYIPAQPAPKRYQRKQPHLDTRQQKLIEKPTAKPQGPLVIAVS CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEEE IEQQKMRVYDANGFFAEAPISTGMRGHATPMGVFSVIQKNKWHRSNIYSGAPMPYMQRLT ECCCEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHC WSGIALHAGVVPGYPASHGCIRMPTSFATKMWGWTRMGARVIVTPGDITPTHFTHPLLTA CCCEEEECCCCCCCCCCCCEEECCHHHHHHHCCHHHCCCEEEEECCCCCCCCCCCCHHCC KRPAPADAPMASDPQKPGTAPKSDKAATAEPAAAPAAGLHPELRAGILGDAPRPPVQTAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC ASAADPGAALVLSDSPARENASAEPAPATSPADAHAEATVDSIAKDEAAEPTAAVAKDIA CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH EATEARPDDLDPATTATVVIAPGSPPQATEKAPSSNEKAPSVESADKLDGKPDAASQSSA HHHCCCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC PGKDQSRPGDPAAPPAAELPAAKRGGGQIAMFVSAKDQKLYVRQNMTPLFDVPVVIAAGE CCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCEECCCEEEECCC RPLGTHVFTAELAKDDGVRWTVVSLPAPQRVNDAGNSRRSKKTLPTPVKASVETEGPAAA CCCCCEEEEEEHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LDRLTIPAEAMARIADAITTGTSFIVSDQGITASGETGRGTDFIISLR HHHCCCCHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCCCEEEEEEC >Mature Secondary Structure MRVNEFRGCDTHLRSIKRFEDHRVRLEQPTMPRASAPRTGPIFKAAWRAGILTAAGVFAL CCCCCCCCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC SSEAHAANWWWPENDDAVYIPAQPAPKRYQRKQPHLDTRQQKLIEKPTAKPQGPLVIAVS CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEEE IEQQKMRVYDANGFFAEAPISTGMRGHATPMGVFSVIQKNKWHRSNIYSGAPMPYMQRLT ECCCEEEEEECCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHC WSGIALHAGVVPGYPASHGCIRMPTSFATKMWGWTRMGARVIVTPGDITPTHFTHPLLTA CCCEEEECCCCCCCCCCCCEEECCHHHHHHHCCHHHCCCEEEEECCCCCCCCCCCCHHCC KRPAPADAPMASDPQKPGTAPKSDKAATAEPAAAPAAGLHPELRAGILGDAPRPPVQTAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC ASAADPGAALVLSDSPARENASAEPAPATSPADAHAEATVDSIAKDEAAEPTAAVAKDIA CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH EATEARPDDLDPATTATVVIAPGSPPQATEKAPSSNEKAPSVESADKLDGKPDAASQSSA HHHCCCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC PGKDQSRPGDPAAPPAAELPAAKRGGGQIAMFVSAKDQKLYVRQNMTPLFDVPVVIAAGE CCCCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCEECCCEEEECCC RPLGTHVFTAELAKDDGVRWTVVSLPAPQRVNDAGNSRRSKKTLPTPVKASVETEGPAAA CCCCCEEEEEEHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH LDRLTIPAEAMARIADAITTGTSFIVSDQGITASGETGRGTDFIISLR HHHCCCCHHHHHHHHHHHHCCCEEEEECCCCEECCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA