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The map label for this gene is yjeA [H]

Identifier: 86749620

GI number: 86749620

Start: 2861883

End: 2862818

Strand: Reverse

Name: yjeA [H]

Synonym: RPB_2500

Alternate gene names: 86749620

Gene position: 2862818-2861883 (Counterclockwise)

Preceding gene: 86749621

Following gene: 86749619

Centisome position: 53.69

GC content: 64.85

Gene sequence:

>936_bases
ATGCGGATAGCAACGGGTCTCCTGGTAGCGAGCGCGATTTCATTGGCTGCGATCGGAGGAGCCTGGTCGCAGGCCGCGCC
GAAGACCACGGGTGCAACGCCGCAGCCGGCACCGCCGCAGGCCGCGCCGGCGCCTGCCCCCGCCAAACAGGCCTGCGCCA
ATCCCGACGCGATCGGCGTCGGTCGCGTGGTCGAGATCGACACCACGGGCGGCCCGGGATTCGGATTCGAGCACTTCAAG
CAGCTCGACTTCCTGCGCGACAAGGAAGTCGTGCTCACCTTCGACGACGGTCCTTGGCCCAGCAACACCCCGGCGGTGTT
GAAGGCGCTGGCCGATCACTGCACCAAGGCGATCTTCTTCCCGATCGGCAAGCACGCCACCTATTACCCGGAGATCCTCA
AGCAGGTCGCCGCGGCCGGGCACACCATCGGCGCGCACACCTGGTCGCACGCCAACCTCTCGAACAAGAAGCTGACCGAG
GATCAGCGCAAGGACGAGATCGAGAAGGGCTTCGCAGCCGTGAAATGGGCGCTCGGCAGTTCGCCGTCGCCGTTCTTCCG
CTTCCCGGCGCTGCAACACCCGCCGGAAATGGTCACCTATCTCGGCACCCGCAACGTCTCGATGTTCTCCTGCGATCTGG
ACTCGTTCGACTTCAAGGCACGCAAGCCGCAGCAGGTCGTCGACACCGTGATGACGAAGGTCGACAAGCTCGGCAAGGGC
ATCATCCTGATGCACGACTTCCAGAAGAGCACCGCCGAGGCGCTGCCCGAATTGCTGCGGCGGCTGAAGCAAGGCGGCTA
CAAGGTCGTGCAGATGAAAGCCAAGGCGCCGGTGGTGACGATGGCGAAATACGAAGAGGAACTGGCCAAGAGCAACGCCC
TGCCGACCGTCAGCACCCGGCCGGTGAGCTCCGTCGTGCAGACCATCTCCGAGTGA

Upstream 100 bases:

>100_bases
CCCGGAGCGGTTTTCTGCCTCTAGCTTGACGGCAAAATGCGGAGATTCTGCCGTGTCGGCCATGTGCGCTGGCGGCAGAT
GACGGCGGAAGGGCACTGAC

Downstream 100 bases:

>100_bases
TCGGATACCGCTTGCGCCGTTATATTCCGGAGGCCCGATGACGGGCGCGCCGGCGATGCGGATCGAAGGATTCGTGATCG
TCTCCGCCGATGGCCATCTC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MRIATGLLVASAISLAAIGGAWSQAAPKTTGATPQPAPPQAAPAPAPAKQACANPDAIGVGRVVEIDTTGGPGFGFEHFK
QLDFLRDKEVVLTFDDGPWPSNTPAVLKALADHCTKAIFFPIGKHATYYPEILKQVAAAGHTIGAHTWSHANLSNKKLTE
DQRKDEIEKGFAAVKWALGSSPSPFFRFPALQHPPEMVTYLGTRNVSMFSCDLDSFDFKARKPQQVVDTVMTKVDKLGKG
IILMHDFQKSTAEALPELLRRLKQGGYKVVQMKAKAPVVTMAKYEEELAKSNALPTVSTRPVSSVVQTISE

Sequences:

>Translated_311_residues
MRIATGLLVASAISLAAIGGAWSQAAPKTTGATPQPAPPQAAPAPAPAKQACANPDAIGVGRVVEIDTTGGPGFGFEHFK
QLDFLRDKEVVLTFDDGPWPSNTPAVLKALADHCTKAIFFPIGKHATYYPEILKQVAAAGHTIGAHTWSHANLSNKKLTE
DQRKDEIEKGFAAVKWALGSSPSPFFRFPALQHPPEMVTYLGTRNVSMFSCDLDSFDFKARKPQQVVDTVMTKVDKLGKG
IILMHDFQKSTAEALPELLRRLKQGGYKVVQMKAKAPVVTMAKYEEELAKSNALPTVSTRPVSSVVQTISE
>Mature_311_residues
MRIATGLLVASAISLAAIGGAWSQAAPKTTGATPQPAPPQAAPAPAPAKQACANPDAIGVGRVVEIDTTGGPGFGFEHFK
QLDFLRDKEVVLTFDDGPWPSNTPAVLKALADHCTKAIFFPIGKHATYYPEILKQVAAAGHTIGAHTWSHANLSNKKLTE
DQRKDEIEKGFAAVKWALGSSPSPFFRFPALQHPPEMVTYLGTRNVSMFSCDLDSFDFKARKPQQVVDTVMTKVDKLGKG
IILMHDFQKSTAEALPELLRRLKQGGYKVVQMKAKAPVVTMAKYEEELAKSNALPTVSTRPVSSVVQTISE

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=177, Percent_Identity=30.5084745762712, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 33505; Mature: 33505

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIATGLLVASAISLAAIGGAWSQAAPKTTGATPQPAPPQAAPAPAPAKQACANPDAIGV
CCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
GRVVEIDTTGGPGFGFEHFKQLDFLRDKEVVLTFDDGPWPSNTPAVLKALADHCTKAIFF
CCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
PIGKHATYYPEILKQVAAAGHTIGAHTWSHANLSNKKLTEDQRKDEIEKGFAAVKWALGS
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
SPSPFFRFPALQHPPEMVTYLGTRNVSMFSCDLDSFDFKARKPQQVVDTVMTKVDKLGKG
CCCCCEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC
IILMHDFQKSTAEALPELLRRLKQGGYKVVQMKAKAPVVTMAKYEEELAKSNALPTVSTR
EEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCC
PVSSVVQTISE
HHHHHHHHHCC
>Mature Secondary Structure
MRIATGLLVASAISLAAIGGAWSQAAPKTTGATPQPAPPQAAPAPAPAKQACANPDAIGV
CCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC
GRVVEIDTTGGPGFGFEHFKQLDFLRDKEVVLTFDDGPWPSNTPAVLKALADHCTKAIFF
CCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
PIGKHATYYPEILKQVAAAGHTIGAHTWSHANLSNKKLTEDQRKDEIEKGFAAVKWALGS
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
SPSPFFRFPALQHPPEMVTYLGTRNVSMFSCDLDSFDFKARKPQQVVDTVMTKVDKLGKG
CCCCCEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC
IILMHDFQKSTAEALPELLRRLKQGGYKVVQMKAKAPVVTMAKYEEELAKSNALPTVSTR
EEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCC
PVSSVVQTISE
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]