| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749486
Identifier: 86749486
GI number: 86749486
Start: 2721091
End: 2721702
Strand: Direct
Name: 86749486
Synonym: RPB_2366
Alternate gene names: NA
Gene position: 2721091-2721702 (Clockwise)
Preceding gene: 86749485
Following gene: 86749487
Centisome position: 51.04
GC content: 67.16
Gene sequence:
>612_bases ATGCTGGCCGGCAACCAACATGAAGAGCAAGGACCCATGACTGCCGCTGCCCTGGCCGACGAGATCGGCATCGAATCCAC CCGTATTTCGGACCGCTACACCGCCGCTATGGCGCTCGGTGTCGTGCGCGATGGCGTGATCACCGGAGAGGGCCCGACGA CCCGCGGCAGAGTTCATTTCTCGCGGACGCTGGACGACGCCGACGTCGCCTGGTGCGCGCGCATTCTTACCGCCGCCGCG GTGGAGAACGAGCCGATCAGCCGTGCCGAAGCCGAGGCCCTGTTCGAGATCAACGCCGCAGCAGCCGAGCGCAAGGACGG CGGTCGCTTCGACGATCTGTTCGCCAAGGCGGTGGTGCACCATGCCGCCGCCGCGTCAGGGCTGCCGGTGCCGTCGCGCA GCGTGGCGCTGGCGCCGGATACCGACATCGAATCCTGGGCACCGACCAAGGCGGTCGGCGTCGACACCGAGGTTCTGGAG TGGATCTCGCGTCAGATGCGCGGCAGCGCGCGCCCGAACAATCGCACTTTGATGCGGATGGTCGCGACCCTGGTCGGCGT CGCCACCCTGCCGTTGATTCAGCTCCCGACGGTATTCGACCTCGGCATGTAA
Upstream 100 bases:
>100_bases CTGCGACAAATCCGCAACCCTCTTAACGATGATCGAGGGTGATGCGCGAACCTCGCAAGCCCGGCTGAAGACTTAACCAA GCGTTTACGCCGGCGTGGAA
Downstream 100 bases:
>100_bases GCAACTCTCTCAGGCTGAGCCTCCGGGCGGCGGGATCATGTCCCGCCGCCCTTTTCGTTGTGCGGACGCTGATGCGGCCG AGTCCGCCCGTCGGTCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MLAGNQHEEQGPMTAAALADEIGIESTRISDRYTAAMALGVVRDGVITGEGPTTRGRVHFSRTLDDADVAWCARILTAAA VENEPISRAEAEALFEINAAAAERKDGGRFDDLFAKAVVHHAAAASGLPVPSRSVALAPDTDIESWAPTKAVGVDTEVLE WISRQMRGSARPNNRTLMRMVATLVGVATLPLIQLPTVFDLGM
Sequences:
>Translated_203_residues MLAGNQHEEQGPMTAAALADEIGIESTRISDRYTAAMALGVVRDGVITGEGPTTRGRVHFSRTLDDADVAWCARILTAAA VENEPISRAEAEALFEINAAAAERKDGGRFDDLFAKAVVHHAAAASGLPVPSRSVALAPDTDIESWAPTKAVGVDTEVLE WISRQMRGSARPNNRTLMRMVATLVGVATLPLIQLPTVFDLGM >Mature_203_residues MLAGNQHEEQGPMTAAALADEIGIESTRISDRYTAAMALGVVRDGVITGEGPTTRGRVHFSRTLDDADVAWCARILTAAA VENEPISRAEAEALFEINAAAAERKDGGRFDDLFAKAVVHHAAAASGLPVPSRSVALAPDTDIESWAPTKAVGVDTEVLE WISRQMRGSARPNNRTLMRMVATLVGVATLPLIQLPTVFDLGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21575; Mature: 21575
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAGNQHEEQGPMTAAALADEIGIESTRISDRYTAAMALGVVRDGVITGEGPTTRGRVHF CCCCCCCCHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCEEEE SRTLDDADVAWCARILTAAAVENEPISRAEAEALFEINAAAAERKDGGRFDDLFAKAVVH ECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH HAAAASGLPVPSRSVALAPDTDIESWAPTKAVGVDTEVLEWISRQMRGSARPNNRTLMRM HHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH VATLVGVATLPLIQLPTVFDLGM HHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure MLAGNQHEEQGPMTAAALADEIGIESTRISDRYTAAMALGVVRDGVITGEGPTTRGRVHF CCCCCCCCHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCEEEE SRTLDDADVAWCARILTAAAVENEPISRAEAEALFEINAAAAERKDGGRFDDLFAKAVVH ECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH HAAAASGLPVPSRSVALAPDTDIESWAPTKAVGVDTEVLEWISRQMRGSARPNNRTLMRM HHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH VATLVGVATLPLIQLPTVFDLGM HHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA