| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749464
Identifier: 86749464
GI number: 86749464
Start: 2693067
End: 2694125
Strand: Direct
Name: 86749464
Synonym: RPB_2344
Alternate gene names: NA
Gene position: 2693067-2694125 (Clockwise)
Preceding gene: 86749462
Following gene: 86749465
Centisome position: 50.51
GC content: 67.8
Gene sequence:
>1059_bases ATGCGTGCCCTGGTGATACTTCTTTTGATCGCCGCGGCGGCCTTGGCGGGCTGGCTGTATTTTCACGGCTCGTTCGACAG CTACCGGCAGAAGACCGGCGAAGCCTTCATCCGGGTCGGCGATTTTCGCGCGGCGCATCTGCCGTCCGCGAACTATGCCG GGCATTATCTGCCTTACGCGCTGTTCGCGCTGCGGGCCTATGATCCGGCCGGACCCGGCGGTTCGCCGAAGCTGAATGCG TTGCTGGAGCGGCCGGCACCGGACGATCCTGCGCGGAGCCGGATCACCGCCGAACTGCGCGGCGGCTGGCTCGGCGACTG GGCGTTGATCGAGCAGGGCGAGGGGCCGTTGCCGTGTCCCGACGGCGACGGGCAGTGCGGCGGCCGGGCGCTCGGCGGGC TCGGCTACAAGGTGTTCAGCTCGCAGGCGCGCAACGAGATCGTCGTCGCCTTCCGCGGCACCGACTTCAAGGAGGCGCAT GACTGGATCGCCAATCTGCGCTGGGTGACGCGGTTTCTGCCGTACTATGATCAATACGCGCAGGTGCAGCGCCACATCGG GCCGATCCTCGACCGGGCGCTGGCGGCGCACAAGCTGGCTGATCCGACGATCGTCGCCACCGGGCATTCGCTCGGCGGCG GGCTGGCGCAGCAGGCGGCCTACAAGGACGGCCGCATCCGCGCGGTCTATGCGTTCGATCCCTCGACCGTCACCGGCTAT TACGATCCCGGCGTTCCGGGCAAGGAGAATTCGGTCGGCCTGCTGATCGATCGGGTGTATCAGCGCGGCGAGGTGCTGGC CTATCTGCGGTTCCTGATGACGCAGCTTTATCCGGTGGCGGCCTTCAATCCGCAGATCCGCACCGTGCGGTTCAGCTTCG GTGCCGAGGGCGGCGTCGTCGCCAGGCACAACATGGCGGATCTCGCCGCCGGCCTGCTCGAAACCTCGGGAACGCCGGAG GCATGGGCCGCGCGCGCCCTGCCGCTGCCGAATGCGCCCGGCAGCGACCCCGGCGAGACCTGGATCTATCGCCTCGTCGA CTGGATCAACCGCAAGTAA
Upstream 100 bases:
>100_bases CTGAGCGCAACGCCTCCGCGGCATTTGTCGTCGCGGCCGATGGCGTGGGCGGCTCCGATTTTGAGACGAAACTGATTGCT CAACCCTGGAGGGCCGAACC
Downstream 100 bases:
>100_bases TTGAACCGGCCGGCGGTCGGCGACGACCAAGGCGATCGGGCAGGTCCGACGCAGGCCGCGTGGCCGCGATGCCGGCCCGG TCCGCGATATTGTAAACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MRALVILLLIAAAALAGWLYFHGSFDSYRQKTGEAFIRVGDFRAAHLPSANYAGHYLPYALFALRAYDPAGPGGSPKLNA LLERPAPDDPARSRITAELRGGWLGDWALIEQGEGPLPCPDGDGQCGGRALGGLGYKVFSSQARNEIVVAFRGTDFKEAH DWIANLRWVTRFLPYYDQYAQVQRHIGPILDRALAAHKLADPTIVATGHSLGGGLAQQAAYKDGRIRAVYAFDPSTVTGY YDPGVPGKENSVGLLIDRVYQRGEVLAYLRFLMTQLYPVAAFNPQIRTVRFSFGAEGGVVARHNMADLAAGLLETSGTPE AWAARALPLPNAPGSDPGETWIYRLVDWINRK
Sequences:
>Translated_352_residues MRALVILLLIAAAALAGWLYFHGSFDSYRQKTGEAFIRVGDFRAAHLPSANYAGHYLPYALFALRAYDPAGPGGSPKLNA LLERPAPDDPARSRITAELRGGWLGDWALIEQGEGPLPCPDGDGQCGGRALGGLGYKVFSSQARNEIVVAFRGTDFKEAH DWIANLRWVTRFLPYYDQYAQVQRHIGPILDRALAAHKLADPTIVATGHSLGGGLAQQAAYKDGRIRAVYAFDPSTVTGY YDPGVPGKENSVGLLIDRVYQRGEVLAYLRFLMTQLYPVAAFNPQIRTVRFSFGAEGGVVARHNMADLAAGLLETSGTPE AWAARALPLPNAPGSDPGETWIYRLVDWINRK >Mature_352_residues MRALVILLLIAAAALAGWLYFHGSFDSYRQKTGEAFIRVGDFRAAHLPSANYAGHYLPYALFALRAYDPAGPGGSPKLNA LLERPAPDDPARSRITAELRGGWLGDWALIEQGEGPLPCPDGDGQCGGRALGGLGYKVFSSQARNEIVVAFRGTDFKEAH DWIANLRWVTRFLPYYDQYAQVQRHIGPILDRALAAHKLADPTIVATGHSLGGGLAQQAAYKDGRIRAVYAFDPSTVTGY YDPGVPGKENSVGLLIDRVYQRGEVLAYLRFLMTQLYPVAAFNPQIRTVRFSFGAEGGVVARHNMADLAAGLLETSGTPE AWAARALPLPNAPGSDPGETWIYRLVDWINRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38356; Mature: 38356
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALVILLLIAAAALAGWLYFHGSFDSYRQKTGEAFIRVGDFRAAHLPSANYAGHYLPYA CHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCHHEEEECCCCCCCCCCCCCCCHHHHHH LFALRAYDPAGPGGSPKLNALLERPAPDDPARSRITAELRGGWLGDWALIEQGEGPLPCP HHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHEEHHHCCCCCCCHHEEECCCCCCCCC DGDGQCGGRALGGLGYKVFSSQARNEIVVAFRGTDFKEAHDWIANLRWVTRFLPYYDQYA CCCCCCCCHHHCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH QVQRHIGPILDRALAAHKLADPTIVATGHSLGGGLAQQAAYKDGRIRAVYAFDPSTVTGY HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCEEEC YDPGVPGKENSVGLLIDRVYQRGEVLAYLRFLMTQLYPVAAFNPQIRTVRFSFGAEGGVV CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEE ARHNMADLAAGLLETSGTPEAWAARALPLPNAPGSDPGETWIYRLVDWINRK EECCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MRALVILLLIAAAALAGWLYFHGSFDSYRQKTGEAFIRVGDFRAAHLPSANYAGHYLPYA CHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCHHEEEECCCCCCCCCCCCCCCHHHHHH LFALRAYDPAGPGGSPKLNALLERPAPDDPARSRITAELRGGWLGDWALIEQGEGPLPCP HHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHEEHHHCCCCCCCHHEEECCCCCCCCC DGDGQCGGRALGGLGYKVFSSQARNEIVVAFRGTDFKEAHDWIANLRWVTRFLPYYDQYA CCCCCCCCHHHCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH QVQRHIGPILDRALAAHKLADPTIVATGHSLGGGLAQQAAYKDGRIRAVYAFDPSTVTGY HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCEEEC YDPGVPGKENSVGLLIDRVYQRGEVLAYLRFLMTQLYPVAAFNPQIRTVRFSFGAEGGVV CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEE ARHNMADLAAGLLETSGTPEAWAARALPLPNAPGSDPGETWIYRLVDWINRK EECCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA