| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fecR [C]
Identifier: 86749353
GI number: 86749353
Start: 2544692
End: 2545675
Strand: Direct
Name: fecR [C]
Synonym: RPB_2233
Alternate gene names: 86749353
Gene position: 2544692-2545675 (Clockwise)
Preceding gene: 86749352
Following gene: 86749354
Centisome position: 47.73
GC content: 65.55
Gene sequence:
>984_bases ATGGAAGAGGACGGCAATCCGGTGGCAGATGCGGCGGGGTATCCGACGTTGCGGTTCGAAGCGCGGCGCTGGCTGGTTCG GATCACCTCCGGCGAGGCCACGGCCGTGGACGCCGACGCCCTGAAGCGCTGGTGCGCGCAGAGCCCGTCGCATGCACGCG CCTTCGCCGAGGTCAATCTCCTCTGGGATAACGTCGAGGTGGCCGCGCATTTGCCGTCGGTCGCCGCGTCGTCCCAAATC GCGGTCCGGGGCGAAGCACCCCAATCGCGGCGCTGGGTCCTCGGCGCGATGGCGGCATCCGCTGCAGCGGCGGCGGGCGC TTTCGCCGTCGATCCCCCGTTCGGACTTTGGCCGTCGTTGCCGGAACTCGGCGCCGACTATCGCACTTTAACCGCCGAAC GTCGCGACATTGCGATGCCGGACGGTGTCAAAATCGAACTCAACACACGCAGTAGCCTGAACATCGTCGCGGGCCAGTCG GGGCAGCAGATCGAGCTGATTGCCGGCGAGGCGGCGATTTCGTGTCCGCATCAGACGGTGCTGTCGGTGCTCGCGGGCGG CGGCGTGGTGCGAGCCGCGGACGCGCAATTCAACATTCGCAGCGATGCGGCAGGATCGATCGTCACCTGTCGACGCGGCG TGGTGTCGCTGAACTATGCTCGACGATCCGTCAGCGTCCGAGAGGGGCATCAGGCGTCTTACGTGGACGGCCGGGTCGGC CCGGTCATCGCGGTCGAGGCCGCTGCAGTGATGGCTTGGCGCGAAGGTCAGTTGGTGTTTCGGCGGACCCCGCTGGCGGA GGCCGTCGACGAGGTCAATCGCTACCGCAGCGGCCGTATCGTTCTGATGAACGAGACGCTCGGTCGTCGTCTGGTCGATG CCAAAATTCCGATTGATCGCGTCGACAGTTTGATCGCGTTGATTCAGCAGGCCTATGGCGCCAAAGTGATATCCCTGCCG GGTGCAATCGTCCTCATCTCATGA
Upstream 100 bases:
>100_bases AGGCCTTGGAGCATTGCGCGCGACGTCTCGAAAGAAAAGTCGTCCGTCGGTTCGGTCCTCGCTCGCAGAAGCCGTCATAG TGTCCGGCTCGCGATCAGAT
Downstream 100 bases:
>100_bases CGGCTGCGGAGTTCCGGTCGGCCGGCTCCTCGATGAAATTTTCATGACGCGGTTCAGTCGGGCGCCGGGTCGACCGTCTC ATCGTTCACAAGAAGAGACC
Product: putative FecR
Products: NA
Alternate protein names: Transmembrane Sensor; FecR Protein; Sigma Factor Regulatory Protein FecR/PupR Family; Fe2+-Dicitrate Sensor Membrane Component; Regulatory Protein; FecR-Like Transmembrane Sensor; Fec Operon Regulator FecR; FecR Iron Siderophore Sensor Protein; FecR Family Protein; Transmembrane Sensor Protein; Anti-Feci Sigma Factor Fecr; Transcriptional Regulator; FecR Family; Anti-Sigma Factor FecR Family; Ferric Citrate Sensor FecR; Iron Siderophore Sensor Protein; Two Component Sensor Kinase; Sigma Factor Regulatory Protein FecR; Anti-Sigma Factor Protein FecR Family; Iron Uptake Regulator Protein; Two Component Sensor Histidine Kinase FecR/PupR; Cytochrome C Oxidase Cbb3-Type Subunit I; Iron Transporter-Like Regulatory Protein; CytoChrome C Oxidase Cbb3-Type Subunit I; FecR Protein Superfamily Protein; Anti-Sigma Factor FecR-Like Protein; Sigma Factor Regulatory Protein; Inner Membrane Sensor For Iron Transport; Protein FecR; Sensor Protein; FecR Family Transmembrane Sensor Protein; IRON Transport Regulator Transmembrane Protein; Iron Acquisition-Like Protein; Iron Transporter-Like Protein; Signal Transduction Protein FecR; Iron Siderophore-Like Protein; IRON Transport-Sensory Transduction Transmembrane Protein; Iron-Dicitrate Sensor Membrane Component; Iron Transport-Sensory Transduction Protein; Heme Uptake Transmembrane Sensor; Regulator Of Iron Dicitrate Transport; Transcriptional Regulator Putative; Iron Sensor; FecR Iron Sensor Protein; Two-Component System Sensor Protein; Iron Dicitrate Transmembrane Sensor FecR
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MEEDGNPVADAAGYPTLRFEARRWLVRITSGEATAVDADALKRWCAQSPSHARAFAEVNLLWDNVEVAAHLPSVAASSQI AVRGEAPQSRRWVLGAMAASAAAAAGAFAVDPPFGLWPSLPELGADYRTLTAERRDIAMPDGVKIELNTRSSLNIVAGQS GQQIELIAGEAAISCPHQTVLSVLAGGGVVRAADAQFNIRSDAAGSIVTCRRGVVSLNYARRSVSVREGHQASYVDGRVG PVIAVEAAAVMAWREGQLVFRRTPLAEAVDEVNRYRSGRIVLMNETLGRRLVDAKIPIDRVDSLIALIQQAYGAKVISLP GAIVLIS
Sequences:
>Translated_327_residues MEEDGNPVADAAGYPTLRFEARRWLVRITSGEATAVDADALKRWCAQSPSHARAFAEVNLLWDNVEVAAHLPSVAASSQI AVRGEAPQSRRWVLGAMAASAAAAAGAFAVDPPFGLWPSLPELGADYRTLTAERRDIAMPDGVKIELNTRSSLNIVAGQS GQQIELIAGEAAISCPHQTVLSVLAGGGVVRAADAQFNIRSDAAGSIVTCRRGVVSLNYARRSVSVREGHQASYVDGRVG PVIAVEAAAVMAWREGQLVFRRTPLAEAVDEVNRYRSGRIVLMNETLGRRLVDAKIPIDRVDSLIALIQQAYGAKVISLP GAIVLIS >Mature_327_residues MEEDGNPVADAAGYPTLRFEARRWLVRITSGEATAVDADALKRWCAQSPSHARAFAEVNLLWDNVEVAAHLPSVAASSQI AVRGEAPQSRRWVLGAMAASAAAAAGAFAVDPPFGLWPSLPELGADYRTLTAERRDIAMPDGVKIELNTRSSLNIVAGQS GQQIELIAGEAAISCPHQTVLSVLAGGGVVRAADAQFNIRSDAAGSIVTCRRGVVSLNYARRSVSVREGHQASYVDGRVG PVIAVEAAAVMAWREGQLVFRRTPLAEAVDEVNRYRSGRIVLMNETLGRRLVDAKIPIDRVDSLIALIQQAYGAKVISLP GAIVLIS
Specific function: Regulation Of Iron Dicitrate Transport. In The Absence Of Citrate Fecr Inactivates Feci. Fecr Is Probably A Sensor That Recognizes Iron Dicitrate In The Periplasm. [C]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34796; Mature: 34796
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEDGNPVADAAGYPTLRFEARRWLVRITSGEATAVDADALKRWCAQSPSHARAFAEVNL CCCCCCCCCCCCCCCEEEEECEEEEEEEECCCCEEECHHHHHHHHHCCCCHHHHEEEEEE LWDNVEVAAHLPSVAASSQIAVRGEAPQSRRWVLGAMAASAAAAAGAFAVDPPFGLWPSL EECCEEEEHHCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHCCCEEECCCCCCCCCC PELGADYRTLTAERRDIAMPDGVKIELNTRSSLNIVAGQSGQQIELIAGEAAISCPHQTV HHHCCCHHEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCEECCCHHHH LSVLAGGGVVRAADAQFNIRSDAAGSIVTCRRGVVSLNYARRSVSVREGHQASYVDGRVG HHHHHCCCEEEEECCEEEECCCCCCCEEEECCCEEEEEHHHHCCCHHCCCCCCCCCCCCC PVIAVEAAAVMAWREGQLVFRRTPLAEAVDEVNRYRSGRIVLMNETLGRRLVDAKIPIDR CEEEEEHHEEEEEECCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCHHH VDSLIALIQQAYGAKVISLPGAIVLIS HHHHHHHHHHHHCCEEEECCCEEEEEC >Mature Secondary Structure MEEDGNPVADAAGYPTLRFEARRWLVRITSGEATAVDADALKRWCAQSPSHARAFAEVNL CCCCCCCCCCCCCCCEEEEECEEEEEEEECCCCEEECHHHHHHHHHCCCCHHHHEEEEEE LWDNVEVAAHLPSVAASSQIAVRGEAPQSRRWVLGAMAASAAAAAGAFAVDPPFGLWPSL EECCEEEEHHCCCCCCCCEEEEECCCCCCCCEEEHHHHHHHHHHCCCEEECCCCCCCCCC PELGADYRTLTAERRDIAMPDGVKIELNTRSSLNIVAGQSGQQIELIAGEAAISCPHQTV HHHCCCHHEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCEECCCHHHH LSVLAGGGVVRAADAQFNIRSDAAGSIVTCRRGVVSLNYARRSVSVREGHQASYVDGRVG HHHHHCCCEEEEECCEEEECCCCCCCEEEECCCEEEEEHHHHCCCHHCCCCCCCCCCCCC PVIAVEAAAVMAWREGQLVFRRTPLAEAVDEVNRYRSGRIVLMNETLGRRLVDAKIPIDR CEEEEEHHEEEEEECCCEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCHHH VDSLIALIQQAYGAKVISLPGAIVLIS HHHHHHHHHHHHCCEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA