| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fecR [C]
Identifier: 86749333
GI number: 86749333
Start: 2514804
End: 2515781
Strand: Direct
Name: fecR [C]
Synonym: RPB_2213
Alternate gene names: 86749333
Gene position: 2514804-2515781 (Clockwise)
Preceding gene: 86749332
Following gene: 86749334
Centisome position: 47.17
GC content: 66.56
Gene sequence:
>978_bases ATGATTAGATCCGACGGGGGCGAAAGAACCGAATTGAGAACCGACGCACGCCGGCTGATCACGCATCTGCTCTCCGGAGA AGCCAAACGCTCGGATTTCGATGCCGCTGACCTCTGGCGCCGGCAGAGCCCCGCGCACGAGCGAGAGTTCGCCGAGGCGG CAAGGTTGTGGCGCAATCTCGGCGCCGCGGGGCGAGACTTGGTGGCCCAGGAGGGCGTCCCGGTCTGGCCGTCGCCAGCG GCGCCGATGAGTCGGCGTGCGATGTTGGTGGGCGGTGGTGCGCTCGCCGCCGCTGCCGCGAGCGCCGCGGTGGTGATGCC GCCGCTTGGCTTGTGGCCGTCGCTCGACGAGCTGCGAGCCGACTATCGGACAGCCACCGGCGAGCAGCGACGCCTGATGT TGCCGGGCGACGTAGCGGTGCGGATGAACACGCAGACCGCGATTTCGGTGCCGGTTTCCCACGGCGATCTGGACCAGATC ACGCTGATTGCAGGCGAGGCGTCGTTTGAAGTTCCGGCGCAGGCGGCGAGGGCGCTCGTGGTTGCGGCCGACAGCGGGTT GACGATCGGCAGCGTTGCCCGGTTCGACATCCGCAACTTCGGAAACAGCGTCTGCGTAACCTGCTCCCAGGGCAAAGTGC GTGTCGAGAGCGGACCGCACGTCGCCACACTCGGCGCCAATCAGCAGCTCCGTTATGACCGCGCCGGGCTCGGCCAGACG GTGTCGGTCAATCCGAACGACGCCGCAGCCTGGCTCGACGGGGTGTTGATCTTTCGCGACACGCCGCTCGCCGATGTCAT CGCGGAGTTGAACAGGTATCGACCCGGCAAGATCGTCCTGATGCGATCTGCGCTGGCGAACAGGACCGTCAACGGCCGTT TTCGCGTCGATCGCATCGATGATGTGTTGACCTGGCTGGCTCAGGCTTACGGCGCCAGGACCCGGTCTCTGCCGGGCGGC GTCATGCTCGTAGTCTAG
Upstream 100 bases:
>100_bases ATGACGGCGGACCTGTACCGATTGGCGCCGCGAGAAACGTCTCTTCCAGAGAGACTTTCATCACCGCTCCCGGGCGGGCC GCACATCCTGGCTGCGCGCG
Downstream 100 bases:
>100_bases CCGTCGTCCCACCATGATAAAAAATCTTCACAAAAATTAACGCGTCGTCAGGTTCAGACTCGCTTCGCGGCAATCGTCTC TCTCGGACGCATCGATCGTG
Product: putative FecR
Products: NA
Alternate protein names: Transmembrane Sensor; FecR Protein; Sigma Factor Regulatory Protein FecR/PupR Family; FecR Iron Siderophore Sensor Protein; Fe2+-Dicitrate Sensor Membrane Component; FecR-Like Transmembrane Sensor; Regulatory Protein; Transmembrane Sensor Protein; Anti-Sigma Factor FecR Family; Ferric Citrate Sensor FecR; Iron Siderophore Sensor Protein; FecR Family; Anti-Sigma Factor Protein FecR Family; Iron Uptake Regulator Protein; Fec Operon Regulator FecR; Transcriptional Regulator; Anti FecI Sigma Factor Regulatory Protein Iron Uptake; Anti-Sigma Factor FecR-Like Protein; Protein FecR; Sensor Protein; Iron Acquisition-Like Protein; Iron Transporter-Like Protein; Signal Transduction Protein FecR; Iron Siderophore-Like Protein; IRON Transport-Sensory Transduction Transmembrane Protein; Iron Transport-Sensory Transduction Protein; PupR Protein; Heme Uptake Transmembrane Sensor; Transcriptional Regulator Putative; FecR Iron Sensor Protein; Iron Dicitrate Transmembrane Sensor FecR
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MIRSDGGERTELRTDARRLITHLLSGEAKRSDFDAADLWRRQSPAHEREFAEAARLWRNLGAAGRDLVAQEGVPVWPSPA APMSRRAMLVGGGALAAAAASAAVVMPPLGLWPSLDELRADYRTATGEQRRLMLPGDVAVRMNTQTAISVPVSHGDLDQI TLIAGEASFEVPAQAARALVVAADSGLTIGSVARFDIRNFGNSVCVTCSQGKVRVESGPHVATLGANQQLRYDRAGLGQT VSVNPNDAAAWLDGVLIFRDTPLADVIAELNRYRPGKIVLMRSALANRTVNGRFRVDRIDDVLTWLAQAYGARTRSLPGG VMLVV
Sequences:
>Translated_325_residues MIRSDGGERTELRTDARRLITHLLSGEAKRSDFDAADLWRRQSPAHEREFAEAARLWRNLGAAGRDLVAQEGVPVWPSPA APMSRRAMLVGGGALAAAAASAAVVMPPLGLWPSLDELRADYRTATGEQRRLMLPGDVAVRMNTQTAISVPVSHGDLDQI TLIAGEASFEVPAQAARALVVAADSGLTIGSVARFDIRNFGNSVCVTCSQGKVRVESGPHVATLGANQQLRYDRAGLGQT VSVNPNDAAAWLDGVLIFRDTPLADVIAELNRYRPGKIVLMRSALANRTVNGRFRVDRIDDVLTWLAQAYGARTRSLPGG VMLVV >Mature_325_residues MIRSDGGERTELRTDARRLITHLLSGEAKRSDFDAADLWRRQSPAHEREFAEAARLWRNLGAAGRDLVAQEGVPVWPSPA APMSRRAMLVGGGALAAAAASAAVVMPPLGLWPSLDELRADYRTATGEQRRLMLPGDVAVRMNTQTAISVPVSHGDLDQI TLIAGEASFEVPAQAARALVVAADSGLTIGSVARFDIRNFGNSVCVTCSQGKVRVESGPHVATLGANQQLRYDRAGLGQT VSVNPNDAAAWLDGVLIFRDTPLADVIAELNRYRPGKIVLMRSALANRTVNGRFRVDRIDDVLTWLAQAYGARTRSLPGG VMLVV
Specific function: Regulation Of Iron Dicitrate Transport. In The Absence Of Citrate Fecr Inactivates Feci. Fecr Is Probably A Sensor That Recognizes Iron Dicitrate In The Periplasm. [C]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=217, Percent_Identity=29.9539170506912, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34908; Mature: 34908
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSDGGERTELRTDARRLITHLLSGEAKRSDFDAADLWRRQSPAHEREFAEAARLWRNL CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH GAAGRDLVAQEGVPVWPSPAAPMSRRAMLVGGGALAAAAASAAVVMPPLGLWPSLDELRA CCCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCEEEECCCCCCCCHHHHHH DYRTATGEQRRLMLPGDVAVRMNTQTAISVPVSHGDLDQITLIAGEASFEVPAQAARALV HHHCCCCCCCEEECCCCEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHCEEE VAADSGLTIGSVARFDIRNFGNSVCVTCSQGKVRVESGPHVATLGANQQLRYDRAGLGQT EEECCCCEECHHHHHHHHHCCCEEEEEECCCEEEECCCCEEEEECCCCCEEEHHCCCCCE VSVNPNDAAAWLDGVLIFRDTPLADVIAELNRYRPGKIVLMRSALANRTVNGRFRVDRID EEECCCCHHHHHCCEEEEECCCHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCEEEEHHHH DVLTWLAQAYGARTRSLPGGVMLVV HHHHHHHHHHCCCCCCCCCCEEEEC >Mature Secondary Structure MIRSDGGERTELRTDARRLITHLLSGEAKRSDFDAADLWRRQSPAHEREFAEAARLWRNL CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH GAAGRDLVAQEGVPVWPSPAAPMSRRAMLVGGGALAAAAASAAVVMPPLGLWPSLDELRA CCCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCEEEECCCCCCCCHHHHHH DYRTATGEQRRLMLPGDVAVRMNTQTAISVPVSHGDLDQITLIAGEASFEVPAQAARALV HHHCCCCCCCEEECCCCEEEEEECCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHCEEE VAADSGLTIGSVARFDIRNFGNSVCVTCSQGKVRVESGPHVATLGANQQLRYDRAGLGQT EEECCCCEECHHHHHHHHHCCCEEEEEECCCEEEECCCCEEEEECCCCCEEEHHCCCCCE VSVNPNDAAAWLDGVLIFRDTPLADVIAELNRYRPGKIVLMRSALANRTVNGRFRVDRID EEECCCCHHHHHCCEEEEECCCHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCEEEEHHHH DVLTWLAQAYGARTRSLPGGVMLVV HHHHHHHHHHCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA