| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is hisI
Identifier: 86749306
GI number: 86749306
Start: 2478544
End: 2478990
Strand: Direct
Name: hisI
Synonym: RPB_2185
Alternate gene names: 86749306
Gene position: 2478544-2478990 (Clockwise)
Preceding gene: 86749305
Following gene: 86749307
Centisome position: 46.49
GC content: 66.89
Gene sequence:
>447_bases GTGTGCTCATCTGCTGCCGCATCGCCCGCGCTCGATGATATCGAGGAGGGCATCGCGCTGCGTCCGAAATTCGACGCGGC CGGCCTCGTCACCTGCGTCACCACCGACGCGGGTTCAGGCGATGTCTTGATGGTGGCGCATATGAACGCGGAAGCGCTGG AGAAAACCATCCAGAGCGGCGAGGCCTGGTACTACAGCCGCTCGCGCAAGCGTCTCTGGAAGAAGGGCGAGAGCTCCGGC CACGTCCAGCGCGTCTTGGAGATGCGCATCGATTGCGACCAGGACGCGGTCTGGATCCGGGTCGACCAGGCCGGCGGCGC CGCCTGCCACACCGGCCGCAAGTCCTGCTTCTACCGCCGCATCGACCGCGACGCCTCCGGCGAGCCGCTGCTGACCATGG TCGACGCCGAGCGGCAGTTCGACCCGGACAAGGTCTACGGCAAGTAG
Upstream 100 bases:
>100_bases TACACCGGCATGTTCCGCGACAATCCGGCGGAGCAGGCGCGGTTCATGTCGATGATTCGCAACCGCGGTTAAGCCGCAGG ATTGCGAGAGGAAAACGCTC
Downstream 100 bases:
>100_bases CGCCACGCGCTTCTTCCCGTCATTCCGGGGCGCTCGCGCAGCGAGCGAACCCGGAATCCCGAGCTGTTCATCGCGCGGCA TTCCCAACCTCGAGATTCCG
Product: phosphoribosyl-AMP cyclohydrolase
Products: NA
Alternate protein names: PRA-CH
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MCSSAAASPALDDIEEGIALRPKFDAAGLVTCVTTDAGSGDVLMVAHMNAEALEKTIQSGEAWYYSRSRKRLWKKGESSG HVQRVLEMRIDCDQDAVWIRVDQAGGAACHTGRKSCFYRRIDRDASGEPLLTMVDAERQFDPDKVYGK
Sequences:
>Translated_148_residues MCSSAAASPALDDIEEGIALRPKFDAAGLVTCVTTDAGSGDVLMVAHMNAEALEKTIQSGEAWYYSRSRKRLWKKGESSG HVQRVLEMRIDCDQDAVWIRVDQAGGAACHTGRKSCFYRRIDRDASGEPLLTMVDAERQFDPDKVYGK >Mature_148_residues MCSSAAASPALDDIEEGIALRPKFDAAGLVTCVTTDAGSGDVLMVAHMNAEALEKTIQSGEAWYYSRSRKRLWKKGESSG HVQRVLEMRIDCDQDAVWIRVDQAGGAACHTGRKSCFYRRIDRDASGEPLLTMVDAERQFDPDKVYGK
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-CH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=90, Percent_Identity=43.3333333333333, Blast_Score=90, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6319819, Length=90, Percent_Identity=37.7777777777778, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS3_RHOP2 (Q2IY19)
Other databases:
- EMBL: CP000250 - RefSeq: YP_485802.1 - ProteinModelPortal: Q2IY19 - SMR: Q2IY19 - STRING: Q2IY19 - GeneID: 3909965 - GenomeReviews: CP000250_GR - KEGG: rpb:RPB_2185 - eggNOG: COG0139 - HOGENOM: HBG294308 - OMA: LWLKGES - ProtClustDB: PRK00051 - BioCyc: RPAL316058:RPB_2185-MONOMER - GO: GO:0005737 - HAMAP: MF_01021 - InterPro: IPR002496 - ProDom: PD002610
Pfam domain/function: PF01502 PRA-CH
EC number: =3.5.4.19
Molecular weight: Translated: 16287; Mature: 16287
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSSAAASPALDDIEEGIALRPKFDAAGLVTCVTTDAGSGDVLMVAHMNAEALEKTIQSG CCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHCC EAWYYSRSRKRLWKKGESSGHVQRVLEMRIDCDQDAVWIRVDQAGGAACHTGRKSCFYRR CCEEEHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHCCHHHHHHHH IDRDASGEPLLTMVDAERQFDPDKVYGK HCCCCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MCSSAAASPALDDIEEGIALRPKFDAAGLVTCVTTDAGSGDVLMVAHMNAEALEKTIQSG CCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHCC EAWYYSRSRKRLWKKGESSGHVQRVLEMRIDCDQDAVWIRVDQAGGAACHTGRKSCFYRR CCEEEHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHCCHHHHHHHH IDRDASGEPLLTMVDAERQFDPDKVYGK HCCCCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA