Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86749303

Identifier: 86749303

GI number: 86749303

Start: 2475944

End: 2476864

Strand: Direct

Name: 86749303

Synonym: RPB_2182

Alternate gene names: NA

Gene position: 2475944-2476864 (Clockwise)

Preceding gene: 86749301

Following gene: 86749305

Centisome position: 46.44

GC content: 72.42

Gene sequence:

>921_bases
GTGAACGCCGCTGTTCTGTCCCGCTTCGCCAGATCGACGCTCACACGCGTCGCCGCGCTCGGCTTTGTGCTGCTCGGCGC
CGCGGCGGGGCCGACGCCATCGGCGCAGGCCGGCGGCAGCCTCGAGCAGCGTAAGCTTCCGATGCGGTTCGACTGGGTCG
CCTGCGAGCCGAACTGCACCGGCTGGATCAGCGCGGTCGGCATCGTCACCGCCGACACCCCGAAGGAGTTCGACGAATTC
GCCCGCAGCCGGCCGCTCGACGGCGCGGCGCTGGTGCTGGATTCCAGCGGTGGCTCGGTCAACGACGCGATCACGCTGGG
CCGGCGCTGGCGCAAGATGGGGCTGATGACCACGGTCGGCGCCAGCGTGCGGACGCAGACGCCGTCCGGCGTTCGCGCCG
GCATCGCGCCGCAGGCCTATTGCGAGTCGATGTGCGTGTTCCTGCTGCTGGCCGGCAAGACCCGCTACGTGCCCGAGGGC
GCCCGGGTCCGGGTCCACCAGATCTGGATGGGCGACCGCGCCGAGGACGCCCGCGCCGCCAGCTACACCGCCCAGGACCT
CACCATCATCGAGCGCGATATCGGCCGGCTCGCCAAATACACCTTCGAGATGGGCGGCACCGGCGACCTGCTGGCGCTCG
CGCTCAGCGTGCCGCCCTGGGAGGATCTGCACCAGCTGTCGCCGCAGGAACTGCGCGACGCCAATCTGGTCACCGCCCAG
GCTTTGGCCGAGCTGCTGCCGCCGAAGCGCGAGGGCAGCGCGACGCCGGTCGCCGCCACTCCTGTCGCCGCGGCAAGTCC
CGCCACCGGCCCCAAGCCGGTGCAGGACCGCTTCGTCCAGGTGCCCACCACCCCGACCAAAACCGCCGAAGCCGCCCTGC
CGACCGGCGGCACCGCCCCGGCCGCGCCGCCTCCGCAATAA

Upstream 100 bases:

>100_bases
CCTTTCGCGCATCTGCTGACGGAGTTGAAGTCCGCCGAGTTGAAGTCCGCCCGAGTTGAAGCCAGCCCGGAGTTGAAGAC
CCGGAGTCGAAGGAGCCACG

Downstream 100 bases:

>100_bases
GCTCCGCGCCCGACCCTCGCGCCCCGGACCCGCGTACCCCGGACCCTCGTGCCCCGGACGCAGTGCAGCGCGCCGCGTTT
TCGCGGCGTGATGCGCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNAAVLSRFARSTLTRVAALGFVLLGAAAGPTPSAQAGGSLEQRKLPMRFDWVACEPNCTGWISAVGIVTADTPKEFDEF
ARSRPLDGAALVLDSSGGSVNDAITLGRRWRKMGLMTTVGASVRTQTPSGVRAGIAPQAYCESMCVFLLLAGKTRYVPEG
ARVRVHQIWMGDRAEDARAASYTAQDLTIIERDIGRLAKYTFEMGGTGDLLALALSVPPWEDLHQLSPQELRDANLVTAQ
ALAELLPPKREGSATPVAATPVAAASPATGPKPVQDRFVQVPTTPTKTAEAALPTGGTAPAAPPPQ

Sequences:

>Translated_306_residues
MNAAVLSRFARSTLTRVAALGFVLLGAAAGPTPSAQAGGSLEQRKLPMRFDWVACEPNCTGWISAVGIVTADTPKEFDEF
ARSRPLDGAALVLDSSGGSVNDAITLGRRWRKMGLMTTVGASVRTQTPSGVRAGIAPQAYCESMCVFLLLAGKTRYVPEG
ARVRVHQIWMGDRAEDARAASYTAQDLTIIERDIGRLAKYTFEMGGTGDLLALALSVPPWEDLHQLSPQELRDANLVTAQ
ALAELLPPKREGSATPVAATPVAAASPATGPKPVQDRFVQVPTTPTKTAEAALPTGGTAPAAPPPQ
>Mature_306_residues
MNAAVLSRFARSTLTRVAALGFVLLGAAAGPTPSAQAGGSLEQRKLPMRFDWVACEPNCTGWISAVGIVTADTPKEFDEF
ARSRPLDGAALVLDSSGGSVNDAITLGRRWRKMGLMTTVGASVRTQTPSGVRAGIAPQAYCESMCVFLLLAGKTRYVPEG
ARVRVHQIWMGDRAEDARAASYTAQDLTIIERDIGRLAKYTFEMGGTGDLLALALSVPPWEDLHQLSPQELRDANLVTAQ
ALAELLPPKREGSATPVAATPVAAASPATGPKPVQDRFVQVPTTPTKTAEAALPTGGTAPAAPPPQ

Specific function: Unknown

COG id: COG3904

COG function: function code S; Predicted periplasmic protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32156; Mature: 32156

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAAVLSRFARSTLTRVAALGFVLLGAAAGPTPSAQAGGSLEQRKLPMRFDWVACEPNCT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEEECCCCC
GWISAVGIVTADTPKEFDEFARSRPLDGAALVLDSSGGSVNDAITLGRRWRKMGLMTTVG
HHHHEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
ASVRTQTPSGVRAGIAPQAYCESMCVFLLLAGKTRYVPEGARVRVHQIWMGDRAEDARAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHH
SYTAQDLTIIERDIGRLAKYTFEMGGTGDLLALALSVPPWEDLHQLSPQELRDANLVTAQ
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCHHHHHHCHHHHHH
ALAELLPPKREGSATPVAATPVAAASPATGPKPVQDRFVQVPTTPTKTAEAALPTGGTAP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCEEECCCCCCCCHHHCCCCCCCCC
AAPPPQ
CCCCCC
>Mature Secondary Structure
MNAAVLSRFARSTLTRVAALGFVLLGAAAGPTPSAQAGGSLEQRKLPMRFDWVACEPNCT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEEECCCCC
GWISAVGIVTADTPKEFDEFARSRPLDGAALVLDSSGGSVNDAITLGRRWRKMGLMTTVG
HHHHEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
ASVRTQTPSGVRAGIAPQAYCESMCVFLLLAGKTRYVPEGARVRVHQIWMGDRAEDARAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHH
SYTAQDLTIIERDIGRLAKYTFEMGGTGDLLALALSVPPWEDLHQLSPQELRDANLVTAQ
HCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCHHHHHHCHHHHHH
ALAELLPPKREGSATPVAATPVAAASPATGPKPVQDRFVQVPTTPTKTAEAALPTGGTAP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCEEECCCCCCCCHHHCCCCCCCCC
AAPPPQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA