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The map label for this gene is mmgC [H]

Identifier: 86749241

GI number: 86749241

Start: 2410797

End: 2411945

Strand: Direct

Name: mmgC [H]

Synonym: RPB_2120

Alternate gene names: 86749241

Gene position: 2410797-2411945 (Clockwise)

Preceding gene: 86749240

Following gene: 86749242

Centisome position: 45.22

GC content: 67.1

Gene sequence:

>1149_bases
ATGACAATGTTCGACCTCAACGAAGACCAACGCGCCATCCGCGACATGGCGCGGGATTTCGCGGCCGAGAAGATCGCGCC
GCACGCGCTGCAATGGGACGAGGACAAGCACTTGCCGCTGGACGTGATCCGGCAGGCGGCGGCGCTCGGGATCGGCGGCA
TCTACATCCGCGATGATGTCGGCGGCAGCGCGATGACGCGGTTCGACGCGGCGCTGATCTTCGAGGCGCTGGCGGAAGGC
TGCCCGGCGATCTCCGCCTTCATCTCGATCCACAACATGGCGGCGTGGATGATCGACAGCTATGGCTCCGAGGCGCAGCG
GCAGCAATGGCTGCCCAAGCTGTGCAGCATGGAGCTGATCGCCAGCTATTGCCTGACCGAGCCGGGCTCGGGCTCGGACG
CCGCGGCGTTGCGCACCCGCGCGGTGATCGACGGCGATCATTACGTGCTCAACGGCCAGAAGCAGTTCATCTCCGGCGCC
GGCGCCAACGATCTCTATGTTGTGATGGTGCGCACCGGCGGCGACGGCCCGGGCGGGATCTCGACGCTCGTCGTCGACAA
GGACACCCCCGGTCTCAGCTTTGGCGCCAACGAGCGCAAGATGGGCTGGAACGCGCAGCCGACGCGCGCGGTGATCTTCG
AGAACGCCCGCGTGCCGGTCGCCAACCGGCTCGGCGACGAGGGCATCGGCTTCAAGATCGCGATGGCCGGGCTCGACGGC
GGACGGCTCAACATCGGCGCCTGTTCGCTCGGCGGCGCCCAGGCGGCGCTCTCCAAGGCGCTGGACTACATGAAAGAGCG
CAAAGCCTTCGGCAAACGTCTCGACGAATTCCAGGCGCTGCAGTTCCGGCTCGCCGACATGGCGACCGAGCTGGAAGCCG
CGCGGACGCTGCTGTGGCGCGCCGCCGCCGCGCTCGACCGCAAGGATGCCGACGCCACCAAGCTGTGCGCGATGGCCAAG
CGCTTCGCCACCGACACCGGCTTCAACGTCGCCAACGACGCGCTGCAGATGCACGGCGGCTACGGCTATCTCGCCGAGTA
CGGCGTCGAGAAGATCGTGCGCGATCTGCGCGTGCACCAGATCCTCGAAGGCACCAACGAGATCATGCGGCTGATCGTGT
CGCGCAAGCTGCTCGAGGAGAACCGATGA

Upstream 100 bases:

>100_bases
TGGATGCCCAATTGGTCACCGCGGACCGCCGCTTCGCCGCCAAGCTCGCCGGCACCGAACACGCCCGCTACGTGACTCTT
CTCTCCGACTGGCAACCCGC

Downstream 100 bases:

>100_bases
ATATAGCGGTCACTGAGCCGGACCTGATCGTCCGGCGCGAGGGCGCAGCCGGCGTGGTCCGCCTCAACCGGCCGAAAGCG
CTGAATGCGCTGACGCTGGA

Product: Acyl-CoA dehydrogenase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MTMFDLNEDQRAIRDMARDFAAEKIAPHALQWDEDKHLPLDVIRQAAALGIGGIYIRDDVGGSAMTRFDAALIFEALAEG
CPAISAFISIHNMAAWMIDSYGSEAQRQQWLPKLCSMELIASYCLTEPGSGSDAAALRTRAVIDGDHYVLNGQKQFISGA
GANDLYVVMVRTGGDGPGGISTLVVDKDTPGLSFGANERKMGWNAQPTRAVIFENARVPVANRLGDEGIGFKIAMAGLDG
GRLNIGACSLGGAQAALSKALDYMKERKAFGKRLDEFQALQFRLADMATELEAARTLLWRAAAALDRKDADATKLCAMAK
RFATDTGFNVANDALQMHGGYGYLAEYGVEKIVRDLRVHQILEGTNEIMRLIVSRKLLEENR

Sequences:

>Translated_382_residues
MTMFDLNEDQRAIRDMARDFAAEKIAPHALQWDEDKHLPLDVIRQAAALGIGGIYIRDDVGGSAMTRFDAALIFEALAEG
CPAISAFISIHNMAAWMIDSYGSEAQRQQWLPKLCSMELIASYCLTEPGSGSDAAALRTRAVIDGDHYVLNGQKQFISGA
GANDLYVVMVRTGGDGPGGISTLVVDKDTPGLSFGANERKMGWNAQPTRAVIFENARVPVANRLGDEGIGFKIAMAGLDG
GRLNIGACSLGGAQAALSKALDYMKERKAFGKRLDEFQALQFRLADMATELEAARTLLWRAAAALDRKDADATKLCAMAK
RFATDTGFNVANDALQMHGGYGYLAEYGVEKIVRDLRVHQILEGTNEIMRLIVSRKLLEENR
>Mature_381_residues
TMFDLNEDQRAIRDMARDFAAEKIAPHALQWDEDKHLPLDVIRQAAALGIGGIYIRDDVGGSAMTRFDAALIFEALAEGC
PAISAFISIHNMAAWMIDSYGSEAQRQQWLPKLCSMELIASYCLTEPGSGSDAAALRTRAVIDGDHYVLNGQKQFISGAG
ANDLYVVMVRTGGDGPGGISTLVVDKDTPGLSFGANERKMGWNAQPTRAVIFENARVPVANRLGDEGIGFKIAMAGLDGG
RLNIGACSLGGAQAALSKALDYMKERKAFGKRLDEFQALQFRLADMATELEAARTLLWRAAAALDRKDADATKLCAMAKR
FATDTGFNVANDALQMHGGYGYLAEYGVEKIVRDLRVHQILEGTNEIMRLIVSRKLLEENR

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7656849, Length=375, Percent_Identity=60.8, Blast_Score=488, Evalue=1e-138,
Organism=Homo sapiens, GI4557231, Length=383, Percent_Identity=38.3812010443864, Blast_Score=274, Evalue=1e-73,
Organism=Homo sapiens, GI187960098, Length=383, Percent_Identity=38.3812010443864, Blast_Score=273, Evalue=1e-73,
Organism=Homo sapiens, GI4557233, Length=380, Percent_Identity=37.8947368421053, Blast_Score=249, Evalue=2e-66,
Organism=Homo sapiens, GI4501859, Length=374, Percent_Identity=37.4331550802139, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI4501857, Length=377, Percent_Identity=32.0954907161804, Blast_Score=211, Evalue=9e-55,
Organism=Homo sapiens, GI226958412, Length=377, Percent_Identity=33.1564986737401, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI76496475, Length=387, Percent_Identity=32.5581395348837, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI4557235, Length=387, Percent_Identity=32.5581395348837, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI21361497, Length=380, Percent_Identity=32.8947368421053, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI226958414, Length=336, Percent_Identity=33.0357142857143, Blast_Score=195, Evalue=5e-50,
Organism=Homo sapiens, GI4503943, Length=380, Percent_Identity=30.7894736842105, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI7669494, Length=352, Percent_Identity=30.9659090909091, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI38505218, Length=352, Percent_Identity=27.8409090909091, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI211971008, Length=287, Percent_Identity=30.6620209059233, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI48976061, Length=287, Percent_Identity=30.6620209059233, Blast_Score=100, Evalue=2e-21,
Organism=Escherichia coli, GI87081958, Length=384, Percent_Identity=29.4270833333333, Blast_Score=138, Evalue=7e-34,
Organism=Escherichia coli, GI1786223, Length=382, Percent_Identity=25.9162303664921, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI87082384, Length=267, Percent_Identity=29.5880149812734, Blast_Score=79, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17533517, Length=378, Percent_Identity=50, Blast_Score=404, Evalue=1e-113,
Organism=Caenorhabditis elegans, GI17569725, Length=379, Percent_Identity=39.8416886543536, Blast_Score=286, Evalue=1e-77,
Organism=Caenorhabditis elegans, GI17534899, Length=380, Percent_Identity=38.1578947368421, Blast_Score=277, Evalue=5e-75,
Organism=Caenorhabditis elegans, GI17570075, Length=379, Percent_Identity=35.0923482849604, Blast_Score=238, Evalue=5e-63,
Organism=Caenorhabditis elegans, GI17508101, Length=365, Percent_Identity=36.4383561643836, Blast_Score=233, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI17506239, Length=365, Percent_Identity=35.0684931506849, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI71985184, Length=353, Percent_Identity=34.2776203966006, Blast_Score=221, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17538396, Length=385, Percent_Identity=34.8051948051948, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI71990804, Length=294, Percent_Identity=36.0544217687075, Blast_Score=184, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI71985192, Length=283, Percent_Identity=34.2756183745583, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI32563615, Length=230, Percent_Identity=38.2608695652174, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI71982178, Length=274, Percent_Identity=32.4817518248175, Blast_Score=160, Evalue=8e-40,
Organism=Caenorhabditis elegans, GI17505929, Length=358, Percent_Identity=31.2849162011173, Blast_Score=151, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI17551932, Length=374, Percent_Identity=29.9465240641711, Blast_Score=148, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI17534353, Length=376, Percent_Identity=26.3297872340426, Blast_Score=128, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI17562446, Length=316, Percent_Identity=28.7974683544304, Blast_Score=111, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17531909, Length=233, Percent_Identity=29.1845493562232, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI86563381, Length=307, Percent_Identity=26.3843648208469, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI86563383, Length=307, Percent_Identity=26.3843648208469, Blast_Score=78, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24660351, Length=382, Percent_Identity=39.5287958115183, Blast_Score=274, Evalue=8e-74,
Organism=Drosophila melanogaster, GI21356377, Length=377, Percent_Identity=36.8700265251989, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24646207, Length=376, Percent_Identity=37.7659574468085, Blast_Score=241, Evalue=5e-64,
Organism=Drosophila melanogaster, GI24666513, Length=372, Percent_Identity=34.4086021505376, Blast_Score=221, Evalue=5e-58,
Organism=Drosophila melanogaster, GI21355753, Length=386, Percent_Identity=33.6787564766839, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI281363737, Length=282, Percent_Identity=35.4609929078014, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI19920834, Length=377, Percent_Identity=28.1167108753316, Blast_Score=131, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41541; Mature: 41410

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMFDLNEDQRAIRDMARDFAAEKIAPHALQWDEDKHLPLDVIRQAAALGIGGIYIRDDV
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
GGSAMTRFDAALIFEALAEGCPAISAFISIHNMAAWMIDSYGSEAQRQQWLPKLCSMELI
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ASYCLTEPGSGSDAAALRTRAVIDGDHYVLNGQKQFISGAGANDLYVVMVRTGGDGPGGI
HHHHCCCCCCCCCHHHHHHHEEECCCEEEECCHHHHHCCCCCCCEEEEEEEECCCCCCCC
STLVVDKDTPGLSFGANERKMGWNAQPTRAVIFENARVPVANRLGDEGIGFKIAMAGLDG
EEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCEEEEEECCCC
GRLNIGACSLGGAQAALSKALDYMKERKAFGKRLDEFQALQFRLADMATELEAARTLLWR
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAALDRKDADATKLCAMAKRFATDTGFNVANDALQMHGGYGYLAEYGVEKIVRDLRVHQ
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ILEGTNEIMRLIVSRKLLEENR
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TMFDLNEDQRAIRDMARDFAAEKIAPHALQWDEDKHLPLDVIRQAAALGIGGIYIRDDV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
GGSAMTRFDAALIFEALAEGCPAISAFISIHNMAAWMIDSYGSEAQRQQWLPKLCSMELI
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ASYCLTEPGSGSDAAALRTRAVIDGDHYVLNGQKQFISGAGANDLYVVMVRTGGDGPGGI
HHHHCCCCCCCCCHHHHHHHEEECCCEEEECCHHHHHCCCCCCCEEEEEEEECCCCCCCC
STLVVDKDTPGLSFGANERKMGWNAQPTRAVIFENARVPVANRLGDEGIGFKIAMAGLDG
EEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHCCCCCCCEEEEEECCCC
GRLNIGACSLGGAQAALSKALDYMKERKAFGKRLDEFQALQFRLADMATELEAARTLLWR
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAALDRKDADATKLCAMAKRFATDTGFNVANDALQMHGGYGYLAEYGVEKIVRDLRVHQ
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ILEGTNEIMRLIVSRKLLEENR
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]