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The map label for this gene is ycjP [H]

Identifier: 86749220

GI number: 86749220

Start: 2386327

End: 2387250

Strand: Direct

Name: ycjP [H]

Synonym: RPB_2099

Alternate gene names: 86749220

Gene position: 2386327-2387250 (Clockwise)

Preceding gene: 86749219

Following gene: 86749221

Centisome position: 44.76

GC content: 62.77

Gene sequence:

>924_bases
ATGACTGAAACCACCGCCTCCGACCCGCGCCTCGCGGTCAAGGCCGCGACCGTCGCCCGGGACGACGACAGCGAGGGCAT
GAGCTATCTGGAATCGCTGCCGCGCCGGCTGGTGACGCTGTATTTGCCGCTGTTCATCATCGTCGTGATCCTGCTGTTCC
CGTTCTACTGGATGGCGCTGACCTCGATCAAACCCGACGAGCAGCTGATCGACATGGACACCTACAACCCGTTCTGGGTG
GTCAAGCCGACGCTGAAGCACATTTCCAAGCTGCTGTTCGAGACGCAATATCCGCGCTGGCTGTGGAACACGATGTATGT
CGCCGCCGCCGCGACGACGTTGTCGATCGTCGCCAGCGTGCTCGCCGCCTATGCGATCGTGCGGCTGCGGTTCCGCGGCG
CCGACAGCGTCGGCGGCGCGATCTTCCTCGCCTATCTGGTGCCGCCGTCGATCCTGTTCATTCCGCTGGCCTCGGTGATC
CAGGCCTACGGCCTGTTCGACTCGCCGCTGTCGCTGATCCTGGTGTATCCGACGCTGCTGATCCCGTTCTCGACCTGGCT
GCTGATGGGCTATTTCAAGACCATCCCGTTCGAGCTCGAGGAATGCGCGCTGATCGACGGCGCCTCGCGCTGGCAGATCC
TCACCAGGATCATCGTGCCGCTCGCTGTGCCCGGGCTGATCTCGGCCTTCATCTTCTCGTTCACGCTGTGCTGGAACGAG
TTCATCTACGCGCTGACCTTCCTGCAGTCGACGCCGAACAAGACCGTGCCGGTGGCGATCGTCAACGAATTCGTCGACGG
CGACATCTACAAATGGGGCTCGCTGATGGCCGGCGCTCTGGTCGGCTCGCTGCCGCTGGTGATCCTCTATGCGTTCTTCG
TCGAGCACTATGTGTCGGCGATGACCGGCGCGGTGAAGGAATAG

Upstream 100 bases:

>100_bases
CCGCGATGATCCCGTTCCTGCTGGCGGCGATTTCGATCTCCTGGTTCGGCATGCAGCGCCGCAAGTGGCAGCAAGGAACC
GACAATGATTGAGGCGCGCC

Downstream 100 bases:

>100_bases
TCGCTCGTGCAGAACATGCCGCCGCCCTTCGAGGCTCGCCCGAGCGGGCGAGCACCTCAGGGTGACGGCTCCAACCACAG
CGTCATCCTGAGGTACGAGC

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTETTASDPRLAVKAATVARDDDSEGMSYLESLPRRLVTLYLPLFIIVVILLFPFYWMALTSIKPDEQLIDMDTYNPFWV
VKPTLKHISKLLFETQYPRWLWNTMYVAAAATTLSIVASVLAAYAIVRLRFRGADSVGGAIFLAYLVPPSILFIPLASVI
QAYGLFDSPLSLILVYPTLLIPFSTWLLMGYFKTIPFELEECALIDGASRWQILTRIIVPLAVPGLISAFIFSFTLCWNE
FIYALTFLQSTPNKTVPVAIVNEFVDGDIYKWGSLMAGALVGSLPLVILYAFFVEHYVSAMTGAVKE

Sequences:

>Translated_307_residues
MTETTASDPRLAVKAATVARDDDSEGMSYLESLPRRLVTLYLPLFIIVVILLFPFYWMALTSIKPDEQLIDMDTYNPFWV
VKPTLKHISKLLFETQYPRWLWNTMYVAAAATTLSIVASVLAAYAIVRLRFRGADSVGGAIFLAYLVPPSILFIPLASVI
QAYGLFDSPLSLILVYPTLLIPFSTWLLMGYFKTIPFELEECALIDGASRWQILTRIIVPLAVPGLISAFIFSFTLCWNE
FIYALTFLQSTPNKTVPVAIVNEFVDGDIYKWGSLMAGALVGSLPLVILYAFFVEHYVSAMTGAVKE
>Mature_306_residues
TETTASDPRLAVKAATVARDDDSEGMSYLESLPRRLVTLYLPLFIIVVILLFPFYWMALTSIKPDEQLIDMDTYNPFWVV
KPTLKHISKLLFETQYPRWLWNTMYVAAAATTLSIVASVLAAYAIVRLRFRGADSVGGAIFLAYLVPPSILFIPLASVIQ
AYGLFDSPLSLILVYPTLLIPFSTWLLMGYFKTIPFELEECALIDGASRWQILTRIIVPLAVPGLISAFIFSFTLCWNEF
IYALTFLQSTPNKTVPVAIVNEFVDGDIYKWGSLMAGALVGSLPLVILYAFFVEHYVSAMTGAVKE

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=273, Percent_Identity=35.5311355311355, Blast_Score=160, Evalue=7e-41,
Organism=Escherichia coli, GI1790464, Length=221, Percent_Identity=30.7692307692308, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1789860, Length=209, Percent_Identity=28.2296650717703, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787368, Length=204, Percent_Identity=26.9607843137255, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34327; Mature: 34196

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETTASDPRLAVKAATVARDDDSEGMSYLESLPRRLVTLYLPLFIIVVILLFPFYWMAL
CCCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSIKPDEQLIDMDTYNPFWVVKPTLKHISKLLFETQYPRWLWNTMYVAAAATTLSIVASV
HCCCCCHHEECCCCCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LAAYAIVRLRFRGADSVGGAIFLAYLVPPSILFIPLASVIQAYGLFDSPLSLILVYPTLL
HHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IPFSTWLLMGYFKTIPFELEECALIDGASRWQILTRIIVPLAVPGLISAFIFSFTLCWNE
HHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIYALTFLQSTPNKTVPVAIVNEFVDGDIYKWGSLMAGALVGSLPLVILYAFFVEHYVSA
HHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTGAVKE
HHHHCCC
>Mature Secondary Structure 
TETTASDPRLAVKAATVARDDDSEGMSYLESLPRRLVTLYLPLFIIVVILLFPFYWMAL
CCCCCCCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]