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The map label for this gene is kanD [H]

Identifier: 86749189

GI number: 86749189

Start: 2350041

End: 2351183

Strand: Direct

Name: kanD [H]

Synonym: RPB_2068

Alternate gene names: 86749189

Gene position: 2350041-2351183 (Clockwise)

Preceding gene: 86749188

Following gene: 86749190

Centisome position: 44.08

GC content: 71.74

Gene sequence:

>1143_bases
GTGCTGCAGTCGCGCCGGTGGTGGCGCGGCAACGGCGGCATCGGCGACGCGTTCGAAGCCGCCTTCGCGGACTCGCTCGG
CGCGGCGCATGTCCGTGTCGTGGCCAACGGCACGCTGGCGCTGGAACTGGCGCTCGATGCGCTCGGCGTGCAGCCGGGCG
ACGAGGTGATCGTGCCGGCCTGCACCTTCATCTCGACGGCGTCGGCGGTGCTGCGGATCGGCGCCTGGCCGATCCCGGTC
GATGTCGAGCGTGACACGCTCAACATCGATGTCGACGCAGTGGCGGCGGCGATCACGCCGCGCACCCGCTGCATCGTCCC
GGTGCATATGGCCGGCCATTCCTGCGACCTGTCGCGCCTGATCGCGCTCGCCCGCAGCCACGGCCTGGCGCTGCTCGAGG
ACGCCGCCCACGCGCATGGCGCGCGCGCGTTCGGCAAGGCGCTGGGCACGTTCGGTGATGCCGCGATCTTCAGTTTCCAG
TCCGGCAAGCTGATGACGTGCGGCGAGGGCGGCGCGATCGCTACGGACCGGCCCGATCTCGCCGCGCGCAGCTTCGCGCT
GCATTCCTGCGGCCGGCCGAAGGGCGACACCGACTATCGGCATCTGATGCCCGCGACCAATATGCGGCTCACCGAATTCC
AGTCGGCGCTGCTGCACGGCCAGCTCGCGCGATTGCCGGCGCTCGGCGCCCAGCGCGAGCGCGCGGCGCCGTGTTTCGAG
GCGCATCTGCGCGCCGCCGGACTGACGCCGCTGGCGCGCCGGGACTATGTCGAAGCCCACGGCCGCTACATGACGATGGC
GTGGTTCGATCCGGCCGCGTTCGGCGGCCGCGACGCCGGACAATTGGCGGCGGAGCTGCGCGGCCTCGGCATTCCGGCGT
ATCGCTGCTTTCCCGAGATCCACCGCACCGGGATGTTCGATCCGCCGGCGTTGCAGCGGTTGCAGCGATCGTCCACGCCG
CCGCCGGACTACGCGCGGATCGCGACGCCGGTCGCCGCCGCCGCGTCGCGTGCGGCGATCTGGTTCGCGCATCCGATCCT
GCTCGGCGACGACGAATTGTTCGCCGACATCGCCCGCGCGATCGGCGAATTGCGACAGCCGCAACGCGCCGCGACGCCCC
TGTCGCTGTCGGAGACGGCATGA

Upstream 100 bases:

>100_bases
CACCAGCAGCGAGAGGCGATCCACGATGCAAGGTCAGTTCTCCGAACGGATACCAGCCTGGCCGCGTTTCGACGACGCGG
ACGAGCGGCGCCTGATCGAG

Downstream 100 bases:

>100_bases
GCGCGCCGCGCCGCATCGATGATCTGATCGCGTTGATCCGACGCGGACGGGTGCTGCTGCCGGACGGCCGCGACGTGACG
ATCGCGGAGGCTTGGCACGA

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: Putative L-glutamine:amino-DOI aminotransferase [H]

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MLQSRRWWRGNGGIGDAFEAAFADSLGAAHVRVVANGTLALELALDALGVQPGDEVIVPACTFISTASAVLRIGAWPIPV
DVERDTLNIDVDAVAAAITPRTRCIVPVHMAGHSCDLSRLIALARSHGLALLEDAAHAHGARAFGKALGTFGDAAIFSFQ
SGKLMTCGEGGAIATDRPDLAARSFALHSCGRPKGDTDYRHLMPATNMRLTEFQSALLHGQLARLPALGAQRERAAPCFE
AHLRAAGLTPLARRDYVEAHGRYMTMAWFDPAAFGGRDAGQLAAELRGLGIPAYRCFPEIHRTGMFDPPALQRLQRSSTP
PPDYARIATPVAAAASRAAIWFAHPILLGDDELFADIARAIGELRQPQRAATPLSLSETA

Sequences:

>Translated_380_residues
MLQSRRWWRGNGGIGDAFEAAFADSLGAAHVRVVANGTLALELALDALGVQPGDEVIVPACTFISTASAVLRIGAWPIPV
DVERDTLNIDVDAVAAAITPRTRCIVPVHMAGHSCDLSRLIALARSHGLALLEDAAHAHGARAFGKALGTFGDAAIFSFQ
SGKLMTCGEGGAIATDRPDLAARSFALHSCGRPKGDTDYRHLMPATNMRLTEFQSALLHGQLARLPALGAQRERAAPCFE
AHLRAAGLTPLARRDYVEAHGRYMTMAWFDPAAFGGRDAGQLAAELRGLGIPAYRCFPEIHRTGMFDPPALQRLQRSSTP
PPDYARIATPVAAAASRAAIWFAHPILLGDDELFADIARAIGELRQPQRAATPLSLSETA
>Mature_380_residues
MLQSRRWWRGNGGIGDAFEAAFADSLGAAHVRVVANGTLALELALDALGVQPGDEVIVPACTFISTASAVLRIGAWPIPV
DVERDTLNIDVDAVAAAITPRTRCIVPVHMAGHSCDLSRLIALARSHGLALLEDAAHAHGARAFGKALGTFGDAAIFSFQ
SGKLMTCGEGGAIATDRPDLAARSFALHSCGRPKGDTDYRHLMPATNMRLTEFQSALLHGQLARLPALGAQRERAAPCFE
AHLRAAGLTPLARRDYVEAHGRYMTMAWFDPAAFGGRDAGQLAAELRGLGIPAYRCFPEIHRTGMFDPPALQRLQRSSTP
PPDYARIATPVAAAASRAAIWFAHPILLGDDELFADIARAIGELRQPQRAATPLSLSETA

Specific function: Catalyzes the transamination of 3-amino-2,3-dideoxy- scyllo-inosose (amino-DOI) into 2-deoxystreptamine (DOS) (Potential) [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. L-glutamine:2- deoxy-scyllo-inosose/scyllo-inosose aminotransferase subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=293, Percent_Identity=35.4948805460751, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI2367285, Length=230, Percent_Identity=37.8260869565217, Blast_Score=136, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 40460; Mature: 40460

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQSRRWWRGNGGIGDAFEAAFADSLGAAHVRVVANGTLALELALDALGVQPGDEVIVPA
CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCEEEEEEEHHHHCCCCCCCEEEEH
CTFISTASAVLRIGAWPIPVDVERDTLNIDVDAVAAAITPRTRCIVPVHMAGHSCDLSRL
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHCCCCCEEEEEEEECCCCCCHHHH
IALARSHGLALLEDAAHAHGARAFGKALGTFGDAAIFSFQSGKLMTCGEGGAIATDRPDL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCEEEECCCCCCCCCCCCH
AARSFALHSCGRPKGDTDYRHLMPATNMRLTEFQSALLHGQLARLPALGAQRERAAPCFE
HHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHH
AHLRAAGLTPLARRDYVEAHGRYMTMAWFDPAAFGGRDAGQLAAELRGLGIPAYRCFPEI
HHHHHCCCCHHHHHHHHHHCCCEEEEEEECCHHCCCCCHHHHHHHHHCCCCCHHHHHHHH
HRTGMFDPPALQRLQRSSTPPPDYARIATPVAAAASRAAIWFAHPILLGDDELFADIARA
HHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEECCEEECCHHHHHHHHHH
IGELRQPQRAATPLSLSETA
HHHHCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MLQSRRWWRGNGGIGDAFEAAFADSLGAAHVRVVANGTLALELALDALGVQPGDEVIVPA
CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCEEEEEEEHHHHCCCCCCCEEEEH
CTFISTASAVLRIGAWPIPVDVERDTLNIDVDAVAAAITPRTRCIVPVHMAGHSCDLSRL
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHCCCCCEEEEEEEECCCCCCHHHH
IALARSHGLALLEDAAHAHGARAFGKALGTFGDAAIFSFQSGKLMTCGEGGAIATDRPDL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCEEEECCCCCCCCCCCCH
AARSFALHSCGRPKGDTDYRHLMPATNMRLTEFQSALLHGQLARLPALGAQRERAAPCFE
HHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHH
AHLRAAGLTPLARRDYVEAHGRYMTMAWFDPAAFGGRDAGQLAAELRGLGIPAYRCFPEI
HHHHHCCCCHHHHHHHHHHCCCEEEEEEECCHHCCCCCHHHHHHHHHCCCCCHHHHHHHH
HRTGMFDPPALQRLQRSSTPPPDYARIATPVAAAASRAAIWFAHPILLGDDELFADIARA
HHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCEEEEECCEEECCHHHHHHHHHH
IGELRQPQRAATPLSLSETA
HHHHCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA