Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is 86749169

Identifier: 86749169

GI number: 86749169

Start: 2325976

End: 2327271

Strand: Direct

Name: 86749169

Synonym: RPB_2047

Alternate gene names: NA

Gene position: 2325976-2327271 (Clockwise)

Preceding gene: 86749167

Following gene: 86749170

Centisome position: 43.63

GC content: 61.65

Gene sequence:

>1296_bases
ATGGTCAGCAAGGTCTCGCGTCGAAAACTGCTTCACATGGCGTCAGCAGGCACGGCCGCTGCCGCTTTTCCCGCCCCATT
CGTGTCCGGCGTCACGCGTGCGGCATCGGCAGATCCGATCCTGCTCGGGGTTCCGACGGCTCAAACCGCCCAGGCGGGCG
TCGCGGATCATCAGGACTATCTGAACGGGACGACGTTGGCCCTGGAAGAAATCAACGGCGCCGGCGGCGTGCTCGGGCGT
CAGGTCAAAGCCGTCGTGGTCGATATCGACCCGCTGTCCCCGGAAAGCGGGCAGGTTGCAATCAACAAGCTGATCGACGC
CAAGGTGCACGCGATGTCCTGCGCCTTCGTGTTCACGCCGGTCCCGGTGGCGGACGTGTCGGCGCGCTACAAGGCGCCGT
TTCTGTGGGGCCTCACTCAGCGCAACATGACCGATCTCGTCGCCAAGCAGCCCGACAAATACTCGCACGTGTTTCAGACT
GACCCGTCCGAGGTCCACTACGGGCACACGTTCCCGGTGTTTTTGAAAGCGATGAAGGACCAGGGGGTGTGGAAGCCGCT
GAATAACGGCGTGCACATCGTCCAGGAACAGATCGCCTACAACCAGACGATCTCGAAGGCGCTGCAGGCGTCGCTCCCCA
AGAGCGAGTTCAAGCTCGCCGGCATCACCGACATCCAGTATCCGGTGCAGGACTGGGGCACAGTCATCCAGGAGATCAAG
AAGGTCGGGGCCGGGGCGGTGATGATCGACCATTGGGTCGCCGCCGAATACGCCGCCTTCGTCAAACAGTACAGCGCCGA
TCCGTTGAAGGGCGCGCTCGTCTATCTGCAATACGGACCGTCGCAGCCCGAGTTCCTCGAACTGTCGGGGCCCGCCGCTG
AAGGCTTCGTCTGGAGCACCGTGCTCGGCGTCTATGCGGACGAGAAGGGCAAGGCATTCCGCGCCAAATACAAGAAGCGG
TTTCCCGGCATCATGGGGCTTTGCTACACCGGCAACGGTTACGACACGACGTATTATCTCAAGGCCGCCTGGGAGGCCGT
CGGCGATCCGTCGAACTTCAAGGGCGTCAGTGACTGGATCCGCAAGAATTCCTATCGCGGCGTCTGCGGCTTCATGAGCA
TGGACAATCCCTATCAGGAATGTGCGCACTATCCGGACACGGGTGATGCGATCGGAGCCGCTGAGCTCGAGAAGGGCATG
GCGCAACTGTTCTTCCAGGTCCAGAACAACGAGCACAAGATCATCTATCCGGACGTGCTCGTCGAGAACAAGCTGCAGAA
GGCGCCGTGGTGGTGA

Upstream 100 bases:

>100_bases
AAGGTGCCCTCCAGTGAAAGACCGGACTTTGATCGGCTACTTATGATGCGGACGTTCTGAAACATGAGCGCCCGCCGGGA
CGCTCGTCAGGGAGAGGTCT

Downstream 100 bases:

>100_bases
CGCCGGGTCGATGACGATGGCCGCATCCGCGATCTTCTCCTGCGATCAGATCGGTCTCGATCTCGGCGGACGTTCGATCC
TGCGCGGCATTTCGCTCGAC

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; Branched-Chain Amino Acid ABC Transporter

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MVSKVSRRKLLHMASAGTAAAAFPAPFVSGVTRAASADPILLGVPTAQTAQAGVADHQDYLNGTTLALEEINGAGGVLGR
QVKAVVVDIDPLSPESGQVAINKLIDAKVHAMSCAFVFTPVPVADVSARYKAPFLWGLTQRNMTDLVAKQPDKYSHVFQT
DPSEVHYGHTFPVFLKAMKDQGVWKPLNNGVHIVQEQIAYNQTISKALQASLPKSEFKLAGITDIQYPVQDWGTVIQEIK
KVGAGAVMIDHWVAAEYAAFVKQYSADPLKGALVYLQYGPSQPEFLELSGPAAEGFVWSTVLGVYADEKGKAFRAKYKKR
FPGIMGLCYTGNGYDTTYYLKAAWEAVGDPSNFKGVSDWIRKNSYRGVCGFMSMDNPYQECAHYPDTGDAIGAAELEKGM
AQLFFQVQNNEHKIIYPDVLVENKLQKAPWW

Sequences:

>Translated_431_residues
MVSKVSRRKLLHMASAGTAAAAFPAPFVSGVTRAASADPILLGVPTAQTAQAGVADHQDYLNGTTLALEEINGAGGVLGR
QVKAVVVDIDPLSPESGQVAINKLIDAKVHAMSCAFVFTPVPVADVSARYKAPFLWGLTQRNMTDLVAKQPDKYSHVFQT
DPSEVHYGHTFPVFLKAMKDQGVWKPLNNGVHIVQEQIAYNQTISKALQASLPKSEFKLAGITDIQYPVQDWGTVIQEIK
KVGAGAVMIDHWVAAEYAAFVKQYSADPLKGALVYLQYGPSQPEFLELSGPAAEGFVWSTVLGVYADEKGKAFRAKYKKR
FPGIMGLCYTGNGYDTTYYLKAAWEAVGDPSNFKGVSDWIRKNSYRGVCGFMSMDNPYQECAHYPDTGDAIGAAELEKGM
AQLFFQVQNNEHKIIYPDVLVENKLQKAPWW
>Mature_431_residues
MVSKVSRRKLLHMASAGTAAAAFPAPFVSGVTRAASADPILLGVPTAQTAQAGVADHQDYLNGTTLALEEINGAGGVLGR
QVKAVVVDIDPLSPESGQVAINKLIDAKVHAMSCAFVFTPVPVADVSARYKAPFLWGLTQRNMTDLVAKQPDKYSHVFQT
DPSEVHYGHTFPVFLKAMKDQGVWKPLNNGVHIVQEQIAYNQTISKALQASLPKSEFKLAGITDIQYPVQDWGTVIQEIK
KVGAGAVMIDHWVAAEYAAFVKQYSADPLKGALVYLQYGPSQPEFLELSGPAAEGFVWSTVLGVYADEKGKAFRAKYKKR
FPGIMGLCYTGNGYDTTYYLKAAWEAVGDPSNFKGVSDWIRKNSYRGVCGFMSMDNPYQECAHYPDTGDAIGAAELEKGM
AQLFFQVQNNEHKIIYPDVLVENKLQKAPWW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47108; Mature: 47108

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSKVSRRKLLHMASAGTAAAAFPAPFVSGVTRAASADPILLGVPTAQTAQAGVADHQDY
CCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCCHHHH
LNGTTLALEEINGAGGVLGRQVKAVVVDIDPLSPESGQVAINKLIDAKVHAMSCAFVFTP
CCCCEEEEEECCCCCCHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEEEECC
VPVADVSARYKAPFLWGLTQRNMTDLVAKQPDKYSHVFQTDPSEVHYGHTFPVFLKAMKD
CCHHHCCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHC
QGVWKPLNNGVHIVQEQIAYNQTISKALQASLPKSEFKLAGITDIQYPVQDWGTVIQEIK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCHHHHHHHHHHHH
KVGAGAVMIDHWVAAEYAAFVKQYSADPLKGALVYLQYGPSQPEFLELSGPAAEGFVWST
HHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHH
VLGVYADEKGKAFRAKYKKRFPGIMGLCYTGNGYDTTYYLKAAWEAVGDPSNFKGVSDWI
HHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEHHHHCCCCCCCCHHHHHH
RKNSYRGVCGFMSMDNPYQECAHYPDTGDAIGAAELEKGMAQLFFQVQNNEHKIIYPDVL
HCCCCCCEEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCEEEECCHH
VENKLQKAPWW
HHHHHHCCCCC
>Mature Secondary Structure
MVSKVSRRKLLHMASAGTAAAAFPAPFVSGVTRAASADPILLGVPTAQTAQAGVADHQDY
CCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCCHHHH
LNGTTLALEEINGAGGVLGRQVKAVVVDIDPLSPESGQVAINKLIDAKVHAMSCAFVFTP
CCCCEEEEEECCCCCCHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEEEECC
VPVADVSARYKAPFLWGLTQRNMTDLVAKQPDKYSHVFQTDPSEVHYGHTFPVFLKAMKD
CCHHHCCCCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHC
QGVWKPLNNGVHIVQEQIAYNQTISKALQASLPKSEFKLAGITDIQYPVQDWGTVIQEIK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCHHHHHHHHHHHH
KVGAGAVMIDHWVAAEYAAFVKQYSADPLKGALVYLQYGPSQPEFLELSGPAAEGFVWST
HHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHH
VLGVYADEKGKAFRAKYKKRFPGIMGLCYTGNGYDTTYYLKAAWEAVGDPSNFKGVSDWI
HHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEHHHHCCCCCCCCHHHHHH
RKNSYRGVCGFMSMDNPYQECAHYPDTGDAIGAAELEKGMAQLFFQVQNNEHKIIYPDVL
HCCCCCCEEEECCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCEEEECCHH
VENKLQKAPWW
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA