Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 86749130

GI number: 86749130

Start: 2281414

End: 2283099

Strand: Direct

Name: recN [H]

Synonym: RPB_2007

Alternate gene names: 86749130

Gene position: 2281414-2283099 (Clockwise)

Preceding gene: 86749129

Following gene: 86749131

Centisome position: 42.79

GC content: 71.06

Gene sequence:

>1686_bases
ATGCTTTCGCGCCTGTCGATCCGCGATATCGTGTTGATCGAGCGGCTCGATATCGAGTTCTCCCGTGGCCTCGCCGTGCT
CACCGGCGAGACCGGGGCGGGCAAATCGATCCTGCTCGATGCGTTTGCGCTGGCGCTCGGCGGCCGCGGCGATGCCGCGC
TGGTCCGCCACGGCGCCGAACACGGCCAGGTCACCGCGACCTTCGACCTCGCCAAAGGCCATCCCGCCTTCGGCATTCTG
TCCGCCAACGGGCTCGACGACCGTGAGATCGAGGATTCCGGTGAGCTGATCCTGCGCCGGATCCAGCTCGCCGACGGCCG
CACCCGCGCGTTCATCAACGACCAGTCGGTCAGCGTGCAGACCCTGAAATCGGTCGGCGCCACGCTGGTCGAGATCCACG
GCCAGCACGACGAGCGCGCGCTGGTCGACGCCGCCACCCATCGGCGGCTGCTCGATGCCTTCGCCGGGCTGGAGAAGGAC
GTCGCCGCGCTGGAGACGCTGTGGGAGGGTCGCCGCAGCGCCCGCGCCGCGCTCGACGCCCACCGCGCCGGGATGGAGCG
GGCCGCGCGCGAGGCGGATTATCTGCGCCACGCCTCCGACGAATTGAAGAAGCTGGCGCCGCAGGACGGCGAGGAGACCG
TGCTGGCCGAGCGCCGCTCCGTGATGATGCAGGGCGAGAAGATCGCCTCCGATCTGCGCGAGGCGCAGGACGCGGTCGGC
GGCCATCATTCGCCGGTGGCGGCGCTGGCCGCCGCGGTGCGCCGGCTGGAGCGTCGCGCCGGCTCCGCGCCGCAACTGGT
CGAGCCCGCGGTGCGGGCGATCGACGCCGCCATCAATGCGCTGGAGGAAGCCGACCAGCATCTCAACGCCGCACTCGCCG
CCGCCGATTTCGACCCGCTCGAACTGGAGCGGATCGAGGAGCGGCTGTTTGCTTTACGCGCGGCAGCGCGGAAGTATTCG
ACGCCGGTCGATGGGCTCGCCGCACTCGCTACGCAATACGCCGCCGACGTGGCGCTGATCGACGCCGGCGCCGACCGGCT
GAAGGCGCTGGAGAAGGCCGCCGGCGACGCCGATGCGCGCTACGGCGCCGCCGCGGCGAAGCTCTCCGCATCGCGCAGCA
AGGCCGCCGACAAGCTCAACAAGGCGGTCAATGGCGAACTCGCGCCGCTCAAGCTCGAGCGCGCCAAATTCATGACCCAG
GTCGAGGCCGATCCGGCGACGCCGGGGCCGCAGGGCATCGACCGCGTCGAATTCTGGGTGCAGACCAACCCCGGCACGCG
GCCCGGCCCGATGATGAAGGTCGCCTCCGGCGGCGAGCTGTCACGCTTCCTGCTGGCGCTGAAAGTGGTGCTGTCGGACA
AGGGCTCGGCGCCGACGCTGGTGTTCGACGAGATCGACACCGGGGTCGGCGGCGCGGTCGCCGATGCGATCGGCGGGCGC
TTGGCGCGGCTCGCCACCAAGGTGCAGGTGATGGCCGTGACCCACGCCCCGCAAGTCGCCGCCCGCGCCGACCAGCATCT
GCTGATTTCCAAAGCCGCGCTCGACAAGGGCAAACGCGTCGCCACCCGCGTCGCCGCCCTGGAACAGGACCACCGCCGCG
AAGAAATCGCGAGGATGCTGGCGGGCGCCGAGATCACCGCCGAGGCAAGGGCGGCGGCGGACCGGCTGATCAAGGCGGCG
GGGTGA

Upstream 100 bases:

>100_bases
TACTCTTGTAAAGTCCGGTGGACTCGAACCCACCGAGAACAAGGGCTCCTGGATCAGCAAGTCCTTCAAAAAGCTCGGTC
TCGGATAGGACCATTTCCTC

Downstream 100 bases:

>100_bases
TCTCATCCTCGCTCCGCGCGGGGCAGGGTGATCGCATCTGAAAGTTCGCGCTCGCGACGTGCATCACCCTCCCCTGGAGG
GGGAGGGTCGCTCGCGTCAG

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MLSRLSIRDIVLIERLDIEFSRGLAVLTGETGAGKSILLDAFALALGGRGDAALVRHGAEHGQVTATFDLAKGHPAFGIL
SANGLDDREIEDSGELILRRIQLADGRTRAFINDQSVSVQTLKSVGATLVEIHGQHDERALVDAATHRRLLDAFAGLEKD
VAALETLWEGRRSARAALDAHRAGMERAAREADYLRHASDELKKLAPQDGEETVLAERRSVMMQGEKIASDLREAQDAVG
GHHSPVAALAAAVRRLERRAGSAPQLVEPAVRAIDAAINALEEADQHLNAALAAADFDPLELERIEERLFALRAAARKYS
TPVDGLAALATQYAADVALIDAGADRLKALEKAAGDADARYGAAAAKLSASRSKAADKLNKAVNGELAPLKLERAKFMTQ
VEADPATPGPQGIDRVEFWVQTNPGTRPGPMMKVASGGELSRFLLALKVVLSDKGSAPTLVFDEIDTGVGGAVADAIGGR
LARLATKVQVMAVTHAPQVAARADQHLLISKAALDKGKRVATRVAALEQDHRREEIARMLAGAEITAEARAAADRLIKAA
G

Sequences:

>Translated_561_residues
MLSRLSIRDIVLIERLDIEFSRGLAVLTGETGAGKSILLDAFALALGGRGDAALVRHGAEHGQVTATFDLAKGHPAFGIL
SANGLDDREIEDSGELILRRIQLADGRTRAFINDQSVSVQTLKSVGATLVEIHGQHDERALVDAATHRRLLDAFAGLEKD
VAALETLWEGRRSARAALDAHRAGMERAAREADYLRHASDELKKLAPQDGEETVLAERRSVMMQGEKIASDLREAQDAVG
GHHSPVAALAAAVRRLERRAGSAPQLVEPAVRAIDAAINALEEADQHLNAALAAADFDPLELERIEERLFALRAAARKYS
TPVDGLAALATQYAADVALIDAGADRLKALEKAAGDADARYGAAAAKLSASRSKAADKLNKAVNGELAPLKLERAKFMTQ
VEADPATPGPQGIDRVEFWVQTNPGTRPGPMMKVASGGELSRFLLALKVVLSDKGSAPTLVFDEIDTGVGGAVADAIGGR
LARLATKVQVMAVTHAPQVAARADQHLLISKAALDKGKRVATRVAALEQDHRREEIARMLAGAEITAEARAAADRLIKAA
G
>Mature_561_residues
MLSRLSIRDIVLIERLDIEFSRGLAVLTGETGAGKSILLDAFALALGGRGDAALVRHGAEHGQVTATFDLAKGHPAFGIL
SANGLDDREIEDSGELILRRIQLADGRTRAFINDQSVSVQTLKSVGATLVEIHGQHDERALVDAATHRRLLDAFAGLEKD
VAALETLWEGRRSARAALDAHRAGMERAAREADYLRHASDELKKLAPQDGEETVLAERRSVMMQGEKIASDLREAQDAVG
GHHSPVAALAAAVRRLERRAGSAPQLVEPAVRAIDAAINALEEADQHLNAALAAADFDPLELERIEERLFALRAAARKYS
TPVDGLAALATQYAADVALIDAGADRLKALEKAAGDADARYGAAAAKLSASRSKAADKLNKAVNGELAPLKLERAKFMTQ
VEADPATPGPQGIDRVEFWVQTNPGTRPGPMMKVASGGELSRFLLALKVVLSDKGSAPTLVFDEIDTGVGGAVADAIGGR
LARLATKVQVMAVTHAPQVAARADQHLLISKAALDKGKRVATRVAALEQDHRREEIARMLAGAEITAEARAAADRLIKAA
G

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=575, Percent_Identity=33.5652173913043, Blast_Score=276, Evalue=2e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 59480; Mature: 59480

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRLSIRDIVLIERLDIEFSRGLAVLTGETGAGKSILLDAFALALGGRGDAALVRHGAE
CCCCCCHHHHHHHHHHCCHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
HGQVTATFDLAKGHPAFGILSANGLDDREIEDSGELILRRIQLADGRTRAFINDQSVSVQ
CCCEEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHH
TLKSVGATLVEIHGQHDERALVDAATHRRLLDAFAGLEKDVAALETLWEGRRSARAALDA
HHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
HRAGMERAAREADYLRHASDELKKLAPQDGEETVLAERRSVMMQGEKIASDLREAQDAVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHHSPVAALAAAVRRLERRAGSAPQLVEPAVRAIDAAINALEEADQHLNAALAAADFDPL
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELERIEERLFALRAAARKYSTPVDGLAALATQYAADVALIDAGADRLKALEKAAGDADAR
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCHH
YGAAAAKLSASRSKAADKLNKAVNGELAPLKLERAKFMTQVEADPATPGPQGIDRVEFWV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
QTNPGTRPGPMMKVASGGELSRFLLALKVVLSDKGSAPTLVFDEIDTGVGGAVADAIGGR
ECCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHH
LARLATKVQVMAVTHAPQVAARADQHLLISKAALDKGKRVATRVAALEQDHRREEIARML
HHHHHHHHHEEEEECCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AGAEITAEARAAADRLIKAAG
HCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSRLSIRDIVLIERLDIEFSRGLAVLTGETGAGKSILLDAFALALGGRGDAALVRHGAE
CCCCCCHHHHHHHHHHCCHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCC
HGQVTATFDLAKGHPAFGILSANGLDDREIEDSGELILRRIQLADGRTRAFINDQSVSVQ
CCCEEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHH
TLKSVGATLVEIHGQHDERALVDAATHRRLLDAFAGLEKDVAALETLWEGRRSARAALDA
HHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
HRAGMERAAREADYLRHASDELKKLAPQDGEETVLAERRSVMMQGEKIASDLREAQDAVG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GHHSPVAALAAAVRRLERRAGSAPQLVEPAVRAIDAAINALEEADQHLNAALAAADFDPL
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELERIEERLFALRAAARKYSTPVDGLAALATQYAADVALIDAGADRLKALEKAAGDADAR
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHCCCCCHH
YGAAAAKLSASRSKAADKLNKAVNGELAPLKLERAKFMTQVEADPATPGPQGIDRVEFWV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
QTNPGTRPGPMMKVASGGELSRFLLALKVVLSDKGSAPTLVFDEIDTGVGGAVADAIGGR
ECCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHH
LARLATKVQVMAVTHAPQVAARADQHLLISKAALDKGKRVATRVAALEQDHRREEIARML
HHHHHHHHHEEEEECCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AGAEITAEARAAADRLIKAAG
HCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA