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The map label for this gene is yfiO [C]

Identifier: 86749129

GI number: 86749129

Start: 2280496

End: 2281401

Strand: Direct

Name: yfiO [C]

Synonym: RPB_2006

Alternate gene names: 86749129

Gene position: 2280496-2281401 (Clockwise)

Preceding gene: 86749128

Following gene: 86749130

Centisome position: 42.77

GC content: 61.81

Gene sequence:

>906_bases
ATGTCGGCACAGCGGCTCGGACTGCGAAACAGGCTGATCTTGCGCGGAAGCGATCGGTTTTGGCGCAGCCTTCCTTTGGT
CGCCAGCCTGATGCTGCTGGCGCTGCCGCTCGGCGGCTGCGGCACCGGCGCGATCTGGGACAAGTTCCTGGCCAAGGACG
AAGACAAGTTCAACGACGAGCCGGCTGACAAGCTCTACAATGAGGGCTTGTACCTGATGAACAAGGAAAAGGACCTCAAG
GGCGCGTCGAAGAAATTCGAGGAAGTCGACCGGCAGCATCCTTATTCCGACTGGGCGCGCAAATCGCTGCTGATGTCGGC
CTATTCGTTCTATCAGGCCGGCGACTACGACAGCTGCATCGGCTCCGCCACCCGCTACGTGACGCTGCACCCCGGCAGCC
CGGATGCGGCCTATGCGCAATATCTGATCGCCGCGTCGCATTACGACCAGATCCCGGACATCTCTCGCGACCAGGGCCGC
ACCGAGAAGGCGATCGCCGCGCTCGAGGAAGTCATCCGCAAATATCCGACCTCCGAATACGCCAACCAGGCCAAGCAGAA
GCTGGAAGGCGCCCGCGACCAGCTCGCCGGCAAGGAGATGGACGTCGGCCGCTTCTACATGGAGAAGCGCGATTACGCCG
CGGCGATCAACCGCTTCAAGACCGTGGTGACGCGCTATCAGACCACCCGCCACGTCGAGGAAGCGCTGGCGCGTCTGACC
GAGGCCTATATGGCGATCGGCATCGTCGGCGAGGCGCAGACCGCCGCCGCCGTGCTTGGCCACAACTTTCCTGACAGCCG
CTGGTACAAAGACGCCTATACTCTTGTAAAGTCCGGTGGACTCGAACCCACCGAGAACAAGGGCTCCTGGATCAGCAAGT
CCTTCAAAAAGCTCGGTCTCGGATAG

Upstream 100 bases:

>100_bases
AGGTCGACTCCATGCTTCGGGGGCAGGTCGGTGGCTTTCGCCATGGCGGCCTGATCGGATGCCGGGGCGCACCGTTCTCC
AGTATGTCAGGTTGGAATTG

Downstream 100 bases:

>100_bases
GACCATTTCCTCATGCTTTCGCGCCTGTCGATCCGCGATATCGTGTTGATCGAGCGGCTCGATATCGAGTTCTCCCGTGG
CCTCGCCGTGCTCACCGGCG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSAQRLGLRNRLILRGSDRFWRSLPLVASLMLLALPLGGCGTGAIWDKFLAKDEDKFNDEPADKLYNEGLYLMNKEKDLK
GASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAASHYDQIPDISRDQGR
TEKAIAALEEVIRKYPTSEYANQAKQKLEGARDQLAGKEMDVGRFYMEKRDYAAAINRFKTVVTRYQTTRHVEEALARLT
EAYMAIGIVGEAQTAAAVLGHNFPDSRWYKDAYTLVKSGGLEPTENKGSWISKSFKKLGLG

Sequences:

>Translated_301_residues
MSAQRLGLRNRLILRGSDRFWRSLPLVASLMLLALPLGGCGTGAIWDKFLAKDEDKFNDEPADKLYNEGLYLMNKEKDLK
GASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAASHYDQIPDISRDQGR
TEKAIAALEEVIRKYPTSEYANQAKQKLEGARDQLAGKEMDVGRFYMEKRDYAAAINRFKTVVTRYQTTRHVEEALARLT
EAYMAIGIVGEAQTAAAVLGHNFPDSRWYKDAYTLVKSGGLEPTENKGSWISKSFKKLGLG
>Mature_300_residues
SAQRLGLRNRLILRGSDRFWRSLPLVASLMLLALPLGGCGTGAIWDKFLAKDEDKFNDEPADKLYNEGLYLMNKEKDLKG
ASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCIGSATRYVTLHPGSPDAAYAQYLIAASHYDQIPDISRDQGRT
EKAIAALEEVIRKYPTSEYANQAKQKLEGARDQLAGKEMDVGRFYMEKRDYAAAINRFKTVVTRYQTTRHVEEALARLTE
AYMAIGIVGEAQTAAAVLGHNFPDSRWYKDAYTLVKSGGLEPTENKGSWISKSFKKLGLG

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=240, Percent_Identity=21.25, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33841; Mature: 33709

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQRLGLRNRLILRGSDRFWRSLPLVASLMLLALPLGGCGTGAIWDKFLAKDEDKFNDE
CCCHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHCCCC
PADKLYNEGLYLMNKEKDLKGASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCI
HHHHHHHCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
GSATRYVTLHPGSPDAAYAQYLIAASHYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEY
CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH
ANQAKQKLEGARDQLAGKEMDVGRFYMEKRDYAAAINRFKTVVTRYQTTRHVEEALARLT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAYMAIGIVGEAQTAAAVLGHNFPDSRWYKDAYTLVKSGGLEPTENKGSWISKSFKKLGL
HHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC
G
C
>Mature Secondary Structure 
SAQRLGLRNRLILRGSDRFWRSLPLVASLMLLALPLGGCGTGAIWDKFLAKDEDKFNDE
CCHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHCCCC
PADKLYNEGLYLMNKEKDLKGASKKFEEVDRQHPYSDWARKSLLMSAYSFYQAGDYDSCI
HHHHHHHCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
GSATRYVTLHPGSPDAAYAQYLIAASHYDQIPDISRDQGRTEKAIAALEEVIRKYPTSEY
CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHH
ANQAKQKLEGARDQLAGKEMDVGRFYMEKRDYAAAINRFKTVVTRYQTTRHVEEALARLT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAYMAIGIVGEAQTAAAVLGHNFPDSRWYKDAYTLVKSGGLEPTENKGSWISKSFKKLGL
HHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]