| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86749095
Identifier: 86749095
GI number: 86749095
Start: 2238228
End: 2239280
Strand: Direct
Name: 86749095
Synonym: RPB_1972
Alternate gene names: NA
Gene position: 2238228-2239280 (Clockwise)
Preceding gene: 86749094
Following gene: 86749098
Centisome position: 41.98
GC content: 66.29
Gene sequence:
>1053_bases ATGTCCACCTTCGAACGCTATCTGACGCTGTGGGTCGCGCTGTGCATCGCCGTCGGCATCGGGCTCGGCCATGTCGTGCC CGGCCTGTTCCAGGCGGTCGCCGCCGCCGAGATCGCCAAGGTCAATCTGCCGGTGGCGGTGCTGATCTGGCTGATGATCA TTCCGATGCTGGTGAAGATCGATTTCGCCGCGCTGGCGCGGGTGCGCGAGCATTGGCGCGGCATCGGCGTGACGCTGTTC ATTAACTGGGCGGTGAAGCCGTTCTCGATGGCGGCGCTGGCCTGGCTGTTCATCGGCTGGCTGTTCAGGGATCATCTGCC GGCCGATCAGATCAATTCCTACATCGCCGGGCTGATCATTCTGGCCGCGGCGCCGTGCACCGCGATGGTGTTCGTGTGGT CGAACCTGATCAAAGGCGAGCCGCATTTCACGCTGAGCCAGGTAGCGCTGAACGACACCATCATGGTGTTCGCCTTCGCG CCGATCGTCGGCCTGCTGCTCGGCCTGTCGGCGATCACCGTGCCGTGGGACACGCTGATGATCTCGGTGGCGCTGTACAT CGTGGTGCCGGTGATCATCGCGCAAATGCTGCGGCGGCGGGTGCTGGCGGCCGGCGGCGAGGCGGGATTGCAGCGCTTGC TCGGCGCGGTTCAGCCGCTGTCGCTGGTCGCCTTGCTGGCGACGCTGGTGCTGCTGTTCGGCTTCCAGGGCGAGCAGATC ATCCGGCAGCCGCTGGTGATCGCGCTGCTCGCGGTGCCGATCCTGATCCAGGTGTATTTCAACGCCGGGCTCGCTTATCT GCTCAATCGCCTGAGCGGCGAGCAGCATTGCGTCGCGGGTCCCTCGGCGCTGATCGGCGCCAGCAACTTCTTCGAACTCG CGGTGGCCGCCGCGATCAGCCTGTTCGGCTTCGAATCCGGCGCGGCGCTGGCCACCGTGGTCGGCGTGCTGATCGAGGTG CCGGTGATGCTGACGGTGGTGTGGATCGTCAACCGCTCCAAGGGCTGGTACGAGGGCGAGGCGCGCGCCGCCGTCACGAC CCGGCCGGGTTAG
Upstream 100 bases:
>100_bases TTCACGGGGATGACGGCGGTGGATTGGGTCGCTTCGTTTGCAAGACAAGACGCTTTTTCGAGCGGCGCGACGCGGCGCGA AGTGATCAAAGAGGTCCTCA
Downstream 100 bases:
>100_bases CCGGCCCGCAGCGTCAGCCCGGTCGCGGCCTCGAGCTCGGCGATCGCCTGATCGGCGCTGACCACCTTGATCGTGGTCAT CCCCAACTCGCGCGCCGGCT
Product: bile acid:sodium symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSTFERYLTLWVALCIAVGIGLGHVVPGLFQAVAAAEIAKVNLPVAVLIWLMIIPMLVKIDFAALARVREHWRGIGVTLF INWAVKPFSMAALAWLFIGWLFRDHLPADQINSYIAGLIILAAAPCTAMVFVWSNLIKGEPHFTLSQVALNDTIMVFAFA PIVGLLLGLSAITVPWDTLMISVALYIVVPVIIAQMLRRRVLAAGGEAGLQRLLGAVQPLSLVALLATLVLLFGFQGEQI IRQPLVIALLAVPILIQVYFNAGLAYLLNRLSGEQHCVAGPSALIGASNFFELAVAAAISLFGFESGAALATVVGVLIEV PVMLTVVWIVNRSKGWYEGEARAAVTTRPG
Sequences:
>Translated_350_residues MSTFERYLTLWVALCIAVGIGLGHVVPGLFQAVAAAEIAKVNLPVAVLIWLMIIPMLVKIDFAALARVREHWRGIGVTLF INWAVKPFSMAALAWLFIGWLFRDHLPADQINSYIAGLIILAAAPCTAMVFVWSNLIKGEPHFTLSQVALNDTIMVFAFA PIVGLLLGLSAITVPWDTLMISVALYIVVPVIIAQMLRRRVLAAGGEAGLQRLLGAVQPLSLVALLATLVLLFGFQGEQI IRQPLVIALLAVPILIQVYFNAGLAYLLNRLSGEQHCVAGPSALIGASNFFELAVAAAISLFGFESGAALATVVGVLIEV PVMLTVVWIVNRSKGWYEGEARAAVTTRPG >Mature_349_residues STFERYLTLWVALCIAVGIGLGHVVPGLFQAVAAAEIAKVNLPVAVLIWLMIIPMLVKIDFAALARVREHWRGIGVTLFI NWAVKPFSMAALAWLFIGWLFRDHLPADQINSYIAGLIILAAAPCTAMVFVWSNLIKGEPHFTLSQVALNDTIMVFAFAP IVGLLLGLSAITVPWDTLMISVALYIVVPVIIAQMLRRRVLAAGGEAGLQRLLGAVQPLSLVALLATLVLLFGFQGEQII RQPLVIALLAVPILIQVYFNAGLAYLLNRLSGEQHCVAGPSALIGASNFFELAVAAAISLFGFESGAALATVVGVLIEVP VMLTVVWIVNRSKGWYEGEARAAVTTRPG
Specific function: Unknown
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=347, Percent_Identity=25.0720461095101, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 37613; Mature: 37481
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFERYLTLWVALCIAVGIGLGHVVPGLFQAVAAAEIAKVNLPVAVLIWLMIIPMLVKI CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DFAALARVREHWRGIGVTLFINWAVKPFSMAALAWLFIGWLFRDHLPADQINSYIAGLII HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LAAAPCTAMVFVWSNLIKGEPHFTLSQVALNDTIMVFAFAPIVGLLLGLSAITVPWDTLM HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH ISVALYIVVPVIIAQMLRRRVLAAGGEAGLQRLLGAVQPLSLVALLATLVLLFGFQGEQI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IRQPLVIALLAVPILIQVYFNAGLAYLLNRLSGEQHCVAGPSALIGASNFFELAVAAAIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHH LFGFESGAALATVVGVLIEVPVMLTVVWIVNRSKGWYEGEARAAVTTRPG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCC >Mature Secondary Structure STFERYLTLWVALCIAVGIGLGHVVPGLFQAVAAAEIAKVNLPVAVLIWLMIIPMLVKI CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DFAALARVREHWRGIGVTLFINWAVKPFSMAALAWLFIGWLFRDHLPADQINSYIAGLII HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LAAAPCTAMVFVWSNLIKGEPHFTLSQVALNDTIMVFAFAPIVGLLLGLSAITVPWDTLM HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH ISVALYIVVPVIIAQMLRRRVLAAGGEAGLQRLLGAVQPLSLVALLATLVLLFGFQGEQI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IRQPLVIALLAVPILIQVYFNAGLAYLLNRLSGEQHCVAGPSALIGASNFFELAVAAAIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHH LFGFESGAALATVVGVLIEVPVMLTVVWIVNRSKGWYEGEARAAVTTRPG HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]