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The map label for this gene is 86748971

Identifier: 86748971

GI number: 86748971

Start: 2114534

End: 2115253

Strand: Direct

Name: 86748971

Synonym: RPB_1848

Alternate gene names: NA

Gene position: 2114534-2115253 (Clockwise)

Preceding gene: 86748964

Following gene: 86748972

Centisome position: 39.66

GC content: 67.22

Gene sequence:

>720_bases
TTGATCATCCGACGTTTGATTGTGCCGACGGTCGCCGCCGTCTTCACTTTGCACGCCATGCAGGCGAATGCGCAAAGCGC
GTTTCCCGCGCCATTGCCGAACCAGGCGTCCACGCCCGCCCAGTCGACGTCCTCGACGTCGGCCTTTCCGGCGCCGCTGC
CGAACCAGTCGGGCGCGGCCGCGGCTCAGCCGTCACCGTTCCCGCCCGTGAGCGGCGGCGCATTCGGCGCCGGCGCAGCA
CCGCTGGCCGGTGGTGGCGGCGGCTTCGCTCCGCCCCCCCAGGCCGCGCCGGTGGGACAGCAGGCCGGCGGAGAGGCCTG
CATGAACGATTTCCTCAAGCTGCGCGAGGAGGCCGAGAAGCGCGGCGCCGCGATTCAGGCCGCCGGCAAGCGCAAGGCTC
CGGCATCGGAGGCCTGCAAGCTGATCATGGCTTTCGCGGCATCCGAAACCAAGATGATCAACTATGTGGTCACCAACTCG
AAGAAATGCGGCATTCCGGGCGAGATCGCCGACCAGCTCAGGAAGGGCCACCAGAACACCACGGGCATGCAGAAGAAGGT
CTGTGATATCGCATCCCAGCAGCAACAGCGTGGCCCGGCCGGCCCGAGCCTCGCCGACGTGCTCGGCTCGTCCACAGCGG
CGCCCGAGGTGAATACGTCGGCCAAGAAATACGGTGGCACCACCTTCGACACGCTGAACGGCAACGTGCTGCAGAGATGA

Upstream 100 bases:

>100_bases
ATTCGGGAATCGTAAAAGGCCGAGGCGACGACAGCATCGTCGCAGTTGAAGGGCGTTTGGGGATTCTTGGGACCATCGAA
CCTTTGCCGGAGGAGCAGCC

Downstream 100 bases:

>100_bases
CCGGCGTCCCGATCAGCGGCGCGACGGCGCCGGTTGCCGACTCGACCGGCAACTGGGTCGACCGCCACGCGCCGGAATGG
TCGCGGCCTTATCTCCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MIIRRLIVPTVAAVFTLHAMQANAQSAFPAPLPNQASTPAQSTSSTSAFPAPLPNQSGAAAAQPSPFPPVSGGAFGAGAA
PLAGGGGGFAPPPQAAPVGQQAGGEACMNDFLKLREEAEKRGAAIQAAGKRKAPASEACKLIMAFAASETKMINYVVTNS
KKCGIPGEIADQLRKGHQNTTGMQKKVCDIASQQQQRGPAGPSLADVLGSSTAAPEVNTSAKKYGGTTFDTLNGNVLQR

Sequences:

>Translated_239_residues
MIIRRLIVPTVAAVFTLHAMQANAQSAFPAPLPNQASTPAQSTSSTSAFPAPLPNQSGAAAAQPSPFPPVSGGAFGAGAA
PLAGGGGGFAPPPQAAPVGQQAGGEACMNDFLKLREEAEKRGAAIQAAGKRKAPASEACKLIMAFAASETKMINYVVTNS
KKCGIPGEIADQLRKGHQNTTGMQKKVCDIASQQQQRGPAGPSLADVLGSSTAAPEVNTSAKKYGGTTFDTLNGNVLQR
>Mature_239_residues
MIIRRLIVPTVAAVFTLHAMQANAQSAFPAPLPNQASTPAQSTSSTSAFPAPLPNQSGAAAAQPSPFPPVSGGAFGAGAA
PLAGGGGGFAPPPQAAPVGQQAGGEACMNDFLKLREEAEKRGAAIQAAGKRKAPASEACKLIMAFAASETKMINYVVTNS
KKCGIPGEIADQLRKGHQNTTGMQKKVCDIASQQQQRGPAGPSLADVLGSSTAAPEVNTSAKKYGGTTFDTLNGNVLQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24210; Mature: 24210

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRRLIVPTVAAVFTLHAMQANAQSAFPAPLPNQASTPAQSTSSTSAFPAPLPNQSGAA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAQPSPFPPVSGGAFGAGAAPLAGGGGGFAPPPQAAPVGQQAGGEACMNDFLKLREEAEK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHH
RGAAIQAAGKRKAPASEACKLIMAFAASETKMINYVVTNSKKCGIPGEIADQLRKGHQNT
CCCEEECCCCCCCCHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCHHHHHHHHHCCCCC
TGMQKKVCDIASQQQQRGPAGPSLADVLGSSTAAPEVNTSAKKYGGTTFDTLNGNVLQR
CHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCEEECCCCHHHCC
>Mature Secondary Structure
MIIRRLIVPTVAAVFTLHAMQANAQSAFPAPLPNQASTPAQSTSSTSAFPAPLPNQSGAA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAQPSPFPPVSGGAFGAGAAPLAGGGGGFAPPPQAAPVGQQAGGEACMNDFLKLREEAEK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHH
RGAAIQAAGKRKAPASEACKLIMAFAASETKMINYVVTNSKKCGIPGEIADQLRKGHQNT
CCCEEECCCCCCCCHHHHHHHHHHHHHCCHHEEEEEEECCCCCCCCHHHHHHHHHCCCCC
TGMQKKVCDIASQQQQRGPAGPSLADVLGSSTAAPEVNTSAKKYGGTTFDTLNGNVLQR
CHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHCCCEEECCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA