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The map label for this gene is amiC [H]

Identifier: 86748917

GI number: 86748917

Start: 2054427

End: 2055749

Strand: Direct

Name: amiC [H]

Synonym: RPB_1794

Alternate gene names: 86748917

Gene position: 2054427-2055749 (Clockwise)

Preceding gene: 86748913

Following gene: 86748918

Centisome position: 38.53

GC content: 62.59

Gene sequence:

>1323_bases
ATGCGTATTGGATCAAAGCATCATCAGGCGACGCCGGTCAGCCGGCGCAAATGGCTGGCGGCCGCCGCCGGTCTGGCCAT
CGGCCTGTCGACCTTCGCGCCCGCCAAGGCTGCCGACGACACCATCAAGGTCGGCGTGCTGCACTCTCTGTCCGGCACCA
TGGCGATCAGCGAAACCACGCTGAAGGACACGGTGCTGTTCCTGATCGACGAGCAGAACAAGAAGGGCGGCGTGCTCGGC
AAGAAGCTCGAGGCGGTCGTGGTCGATCCGGCGTCGAACTGGCCGCTGTTCGCCGAGAAGGCCCGCGAGCTGATCACCAA
GGACAAGGTCTCGGTGGTGTTCGGCTGCTGGACCTCGGTGTCGCGCAAATCGGTGCTGCCGGTGTTCAAGGAGCTGAATT
CGATCCTGTTCTATCCGGTGCAGTACGAAGGCGAGGAGAGCGAGCGCAACGTGTTCTACACCGGCGCCGCGCCGAACCAG
CAGGCGATCCCGGCGGTCGATTATCTCGCCAAGGAAGAAAAGGTGCAGCGCTGGGTGCTGGCCGGCACCGACTACGTCTA
TCCGCGCACCACGAATAAGATTCTGGAAGCCTACTTGAAGTCGAAAGGCGTCAAGCAGGAAGACATCATGATCAATTACA
CGCCGTTCGGTCATTCCGACTGGCAGACCATCGTCGCCGACATCAAGAAGTTCGGCTCGGCCGGCAAGAAGACCGCCGTG
GTCTCGACCATCAACGGCGACGCCAACGTGCCGTTCTACAAGGAACTCGGCAACCAGGGCATCAAGGCCACCGACATTCC
GGTGGTGGCGTTCTCGGTCGGCGAAGAAGAACTCGCCGGCATCGACACCAAGCCGCTGCTCGGCCATCTCGCCGCCTGGA
ACTACTTCCAGTCGATCAAGGACCCCGAGAACGAGAAGTTCATCAAGGCCTGGCAGGCCTACACCAAGAACCCGAAGCGC
GTGACCAACGACCCGATGGAAGCCACCGTGATCGGCTTCAACATGTGGGTGAAGGCGGTCGAGAAGGCCGGCACCGTCGA
CGCCGACAAGGTGATCGACACGCTGCCGGGCACCAAGGCGCCGAACCTGACCGGCGGCACCTCGGAAATGCTGCCGAACC
ACCACATCACCAAGCCGGTGTTCATCGGCGAGATCAAGGGTGACGGCCAGTTCGACGTGGTCTGGAAGACCCCGGGCCTG
GTCCCCGGCGACGCCTGGTCGAAGGAGCTCGACGGCTCCAAGGACCTGATCGGCGACTGGGTGACGCTGAAGTGCGGCAA
CTACAACACCGTGACCAAGAAGTGCGGCGGCCAGGGGACCTGA

Upstream 100 bases:

>100_bases
TAACTGCCACTCCGGGCATGGCACGCTTCTTGCGATTCCTTCTGATGCAGACGGCCGTGGGGCCGGGGCAAAACATTCTG
CGTCAGGGAGATAATACCGC

Downstream 100 bases:

>100_bases
TCAGGCACCTGATCGTCCGCTGACAGACTCACCAAGAGGAGAGGGCGGCGACGCCGGTTCCGCGCCGCCCTCTCGCCCTT
CGACGCTACGCCTCGTTTCT

Product: urea short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MRIGSKHHQATPVSRRKWLAAAAGLAIGLSTFAPAKAADDTIKVGVLHSLSGTMAISETTLKDTVLFLIDEQNKKGGVLG
KKLEAVVVDPASNWPLFAEKARELITKDKVSVVFGCWTSVSRKSVLPVFKELNSILFYPVQYEGEESERNVFYTGAAPNQ
QAIPAVDYLAKEEKVQRWVLAGTDYVYPRTTNKILEAYLKSKGVKQEDIMINYTPFGHSDWQTIVADIKKFGSAGKKTAV
VSTINGDANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPLLGHLAAWNYFQSIKDPENEKFIKAWQAYTKNPKR
VTNDPMEATVIGFNMWVKAVEKAGTVDADKVIDTLPGTKAPNLTGGTSEMLPNHHITKPVFIGEIKGDGQFDVVWKTPGL
VPGDAWSKELDGSKDLIGDWVTLKCGNYNTVTKKCGGQGT

Sequences:

>Translated_440_residues
MRIGSKHHQATPVSRRKWLAAAAGLAIGLSTFAPAKAADDTIKVGVLHSLSGTMAISETTLKDTVLFLIDEQNKKGGVLG
KKLEAVVVDPASNWPLFAEKARELITKDKVSVVFGCWTSVSRKSVLPVFKELNSILFYPVQYEGEESERNVFYTGAAPNQ
QAIPAVDYLAKEEKVQRWVLAGTDYVYPRTTNKILEAYLKSKGVKQEDIMINYTPFGHSDWQTIVADIKKFGSAGKKTAV
VSTINGDANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPLLGHLAAWNYFQSIKDPENEKFIKAWQAYTKNPKR
VTNDPMEATVIGFNMWVKAVEKAGTVDADKVIDTLPGTKAPNLTGGTSEMLPNHHITKPVFIGEIKGDGQFDVVWKTPGL
VPGDAWSKELDGSKDLIGDWVTLKCGNYNTVTKKCGGQGT
>Mature_440_residues
MRIGSKHHQATPVSRRKWLAAAAGLAIGLSTFAPAKAADDTIKVGVLHSLSGTMAISETTLKDTVLFLIDEQNKKGGVLG
KKLEAVVVDPASNWPLFAEKARELITKDKVSVVFGCWTSVSRKSVLPVFKELNSILFYPVQYEGEESERNVFYTGAAPNQ
QAIPAVDYLAKEEKVQRWVLAGTDYVYPRTTNKILEAYLKSKGVKQEDIMINYTPFGHSDWQTIVADIKKFGSAGKKTAV
VSTINGDANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPLLGHLAAWNYFQSIKDPENEKFIKAWQAYTKNPKR
VTNDPMEATVIGFNMWVKAVEKAGTVDADKVIDTLPGTKAPNLTGGTSEMLPNHHITKPVFIGEIKGDGQFDVVWKTPGL
VPGDAWSKELDGSKDLIGDWVTLKCGNYNTVTKKCGGQGT

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48051; Mature: 48051

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGSKHHQATPVSRRKWLAAAAGLAIGLSTFAPAKAADDTIKVGVLHSLSGTMAISETT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEECCC
LKDTVLFLIDEQNKKGGVLGKKLEAVVVDPASNWPLFAEKARELITKDKVSVVFGCWTSV
CCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEHHHC
SRKSVLPVFKELNSILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLAKEEKVQRWVL
CHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHEEEE
AGTDYVYPRTTNKILEAYLKSKGVKQEDIMINYTPFGHSDWQTIVADIKKFGSAGKKTAV
ECCCEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE
VSTINGDANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPLLGHLAAWNYFQSIK
EEEECCCCCCCHHHHHCCCCCEECCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHC
DPENEKFIKAWQAYTKNPKRVTNDPMEATVIGFNMWVKAVEKAGTVDADKVIDTLPGTKA
CCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHCCCCCC
PNLTGGTSEMLPNHHITKPVFIGEIKGDGQFDVVWKTPGLVPGDAWSKELDGSKDLIGDW
CCCCCCCHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHCCCCHHHCCCE
VTLKCGNYNTVTKKCGGQGT
EEEEECCCCHHHHCCCCCCC
>Mature Secondary Structure
MRIGSKHHQATPVSRRKWLAAAAGLAIGLSTFAPAKAADDTIKVGVLHSLSGTMAISETT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEECCC
LKDTVLFLIDEQNKKGGVLGKKLEAVVVDPASNWPLFAEKARELITKDKVSVVFGCWTSV
CCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEHHHC
SRKSVLPVFKELNSILFYPVQYEGEESERNVFYTGAAPNQQAIPAVDYLAKEEKVQRWVL
CHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHEEEE
AGTDYVYPRTTNKILEAYLKSKGVKQEDIMINYTPFGHSDWQTIVADIKKFGSAGKKTAV
ECCCEECCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE
VSTINGDANVPFYKELGNQGIKATDIPVVAFSVGEEELAGIDTKPLLGHLAAWNYFQSIK
EEEECCCCCCCHHHHHCCCCCEECCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHC
DPENEKFIKAWQAYTKNPKRVTNDPMEATVIGFNMWVKAVEKAGTVDADKVIDTLPGTKA
CCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHCCCCCC
PNLTGGTSEMLPNHHITKPVFIGEIKGDGQFDVVWKTPGLVPGDAWSKELDGSKDLIGDW
CCCCCCCHHHCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHCCCCHHHCCCE
VTLKCGNYNTVTKKCGGQGT
EEEEECCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]