Click here to switch to the map view.

The map label for this gene is 86748853

Identifier: 86748853

GI number: 86748853

Start: 1973001

End: 1975607

Strand: Direct

Name: 86748853

Synonym: RPB_1730

Alternate gene names: NA

Gene position: 1973001-1975607 (Clockwise)

Preceding gene: 86748850

Following gene: 86748854

Centisome position: 37.01

GC content: 64.37

Gene sequence:

>2607_bases
GTGCTGAAAAGTGCCATCGTTTCCATTGTGAAAGCCAGCACCCGTTTTGCGTCTTTTACTGTGCTGATCGGGGTATTGCT
CGCGATCGCCAGCGGCTTCTATACTTACCAGAACTTCGGGATCAACACCGATATCAATCATTTGATCTCGTCCGACCTGG
ATTGGCGCAAGCGCGATATCGCCTTCGAGAAGGCGTTCGATCAGGAAAGATTGATCCTGGCGGTGGTCGAGGCTCCGACG
CCGGAATTTGCCAACGCTGCGACGGCCGCGCTGACAGAGAAATTATCAAGCAATCACAAGAACTTCGACTCGGTTAAACG
ACTCGGCGGGGGCGAATTTTTCGACCGGCACGGGTTGCTGTTCCTGCCGACCGACGAGGTCGCCAAGGTGACCGGCCAGT
TCCAGTCGGCAGTTCCGCTGATCGAGATTATGGCCGGCGACCCCAGCATTCGGGGCCTCACGGCCGCGCTGGAGACCGGC
CTGCTCGGCGTGACCCGCGGGCAGATTACGCTCGACGGTGCCGCGGCACCGTTCAACACCATCAGTCAGACCGTCGAGGA
CGTCCTCGCCAAGCGCGCGGCGTTCTTCTCCTGGCGCGGTCTGAGCAGCCCCGAGCCGCTGACCGACGGTGACAAGCGGG
CGTTCATCGAGGTCAAGCCGATCCTCGATTTCACCGAACTCGAGCCGGGCCGGGCCGCTACCGACGCGATCCGTGCAGCG
GCGACCGAGCTCAATCTGGAGCAGCAATTCGGCGCCCGGGTCCGGCTGACGGGCCCGGTGCCGATTGCCAACGAGGAATT
CTCCACGGTCAAGGAAGGCGCCATCGTCAACGGCATCGGCACCGTGGTGGTGGTGCTGATCATCCTGTGGATGGCGCTGC
ACTCCTCGAAGATCATCTTCGCCGTCGCCGCCAACCTGTTCATCGGTCTGGCGATCACCACGGCGGTCGGGCTGATGCTG
GTCGACACGCTCAATCTGCTGTCGATCGCCTTCGCGGTTCTGTTCGTCGGTCTCGGCGTCGATTTCGGCATCCAGTTCAG
CGTTCGCTACAGATCCGAACGCCACAAGACCAACGACCTCAACAAGGCGCTGATCCAGGCGGCGGAGTATTCCGCGGTGC
CGCTGTCGCTGGCGGCGATGTCGACCACCGCCGGTTTCCTGTCGTTTCTGCCGACCTCCTACAAAGGCATTTCCGAACTC
GGCGAGATCGCCGGCGCCGGCATGGCGATCGCGTTCATCTCCAGCATCACGGTGCTGCCGGCGCTGATCAAACTGCTGAA
CCCGGCCGGCGAGAAAGAGCCGCTGGGCTACGCGTTTCTGGCGCCGCTCGATCGCTTCCTGGAGGTTCATCGCGTCGGCG
TGATCGCCGGCACGATCGGTGTCGCATTGGCTGGTCTGCCGCTGCTCTACTACATGCATTTCGACTTCAACCCGATCAAT
CTGCGCAGCCCGAAGGTGGAGTCGATCGCGACCTTCCTCGACCTGCGCAAGGATCCGAACACCGGCGCCAACGCCATCAA
CGTGCTGGCGCCATCCGAACAGGCCGCCAAGGACATCCAGGCCAAGCTGGCGAAGGTGCCCGAAGTGTCGCGGACGCTGT
CGCTCGACACCTTCGTGCCGGCGGATCAGCCAGCGAAGCTGAAGCTGATCCAGGCCGGCGCCAAGGTGCTGGAGCCGGCG
CTGAACCCGGAGCAGATCGACCCTCCGCCGACCGATCAGGAAAACATCGAGGCGCTGAACAGCTCGGTGGCGGCGCTGCG
CAAGACCGCCGGCGACGCCACCGGTCCCGGCGCCGAGGCTGCTCGCCGCCTCGCCACGGCGCTGGGGGCGCTCGCCAAGG
TCGACCAGGCGACCCGCGACCAGGCTCAGGCGGTATTCGTGACGCCGCTGAAGCTCGCCTTCAATCAGCTCCGCAGCATG
TTGCAGGCGGAGCCGGTGACGCTGGACAACCTGCCCCAGGACATCGTGTCCTCCTGGAAGGCCAAGGACGGTCAGATCCG
CATCGAAGTGCTGCCGAACGGCGATCCGAACGACAACGAGACGCTGCGCAAATTCGCAGCGTCGGTGCTGCAGGCCGAGC
CGAATGCCCTCGGCGGGCCGGTGTCGATCCTGAAGTCCGGCGACACCATCGTTGCCTCCTTCATCCAGGCCGGCCTGTGG
GCGCTGCTGTCGATCTCGTTGCTGCTGTGGCTCACGCTGCGGCGGATCTCGGACGTGCTGCTGACGCTGGTTCCGCTGCT
GGTCGCCGGCGCCGTGACCCTGGAAATCTGCGTGCTGATCGGCTTGCCGCTCAATTTCGCCAATATCGTCGCGCTGCCGC
TGCTGCTCGGCATCGGCGTCGCATTCAAGATCTACTATGTGGTGGCGTGGCGCGCGGGACGCACCAATCTGCTGCAATCG
GCGCTGACGCGGGCGATCTTCTTCAGCGCGCTGACGACCGCGACGGCGTTCGGCAGCCTTTGGCTGTCGAGCCACCCCGG
CACCGCCAGCATGGGCAAGCTGCTGGCGCTGTCGCTGCTGACCACGCTGGGCGCGGTGCTGCTGTTCCAGCCGGCGCTGA
TGGGCAAGCCGCGCCATATCGACGAGACCGGCGATACCGACCTCTGA

Upstream 100 bases:

>100_bases
CAGTCTTTGGTCGCTGGAAGGTAGAAACCAGTTCGATCGACTCGATACCCGTCGGAGCCGACGCATTCTAGGCAAGCCGA
TAGCAATAGAAAGAGCAAAT

Downstream 100 bases:

>100_bases
GACCAGCGAGGCCGCCTGCCACCCGAGGCTGGCGTGCGGCCGCGCTCGACGCGGAGGCCACACCGCGTCAGTTCTGGCTG
CCTCACGCGGGCAGCACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: RND Superfamily Exporter; Acriflavin Resistance Plasma Membrane Protein; SecD/SecF Family Protein Export Membrane Protein; RND Efflux Transporter; Exporter Of RND Superfamily Protein-Like Protein; Efflux Pump RND Superfamily Protein; RND Family Efflux Pump; Exporter Of RND Superfamily; Protein Export Membrane Protein; Transporter Exporter RND Family

Number of amino acids: Translated: 868; Mature: 868

Protein sequence:

>868_residues
MLKSAIVSIVKASTRFASFTVLIGVLLAIASGFYTYQNFGINTDINHLISSDLDWRKRDIAFEKAFDQERLILAVVEAPT
PEFANAATAALTEKLSSNHKNFDSVKRLGGGEFFDRHGLLFLPTDEVAKVTGQFQSAVPLIEIMAGDPSIRGLTAALETG
LLGVTRGQITLDGAAAPFNTISQTVEDVLAKRAAFFSWRGLSSPEPLTDGDKRAFIEVKPILDFTELEPGRAATDAIRAA
ATELNLEQQFGARVRLTGPVPIANEEFSTVKEGAIVNGIGTVVVVLIILWMALHSSKIIFAVAANLFIGLAITTAVGLML
VDTLNLLSIAFAVLFVGLGVDFGIQFSVRYRSERHKTNDLNKALIQAAEYSAVPLSLAAMSTTAGFLSFLPTSYKGISEL
GEIAGAGMAIAFISSITVLPALIKLLNPAGEKEPLGYAFLAPLDRFLEVHRVGVIAGTIGVALAGLPLLYYMHFDFNPIN
LRSPKVESIATFLDLRKDPNTGANAINVLAPSEQAAKDIQAKLAKVPEVSRTLSLDTFVPADQPAKLKLIQAGAKVLEPA
LNPEQIDPPPTDQENIEALNSSVAALRKTAGDATGPGAEAARRLATALGALAKVDQATRDQAQAVFVTPLKLAFNQLRSM
LQAEPVTLDNLPQDIVSSWKAKDGQIRIEVLPNGDPNDNETLRKFAASVLQAEPNALGGPVSILKSGDTIVASFIQAGLW
ALLSISLLLWLTLRRISDVLLTLVPLLVAGAVTLEICVLIGLPLNFANIVALPLLLGIGVAFKIYYVVAWRAGRTNLLQS
ALTRAIFFSALTTATAFGSLWLSSHPGTASMGKLLALSLLTTLGAVLLFQPALMGKPRHIDETGDTDL

Sequences:

>Translated_868_residues
MLKSAIVSIVKASTRFASFTVLIGVLLAIASGFYTYQNFGINTDINHLISSDLDWRKRDIAFEKAFDQERLILAVVEAPT
PEFANAATAALTEKLSSNHKNFDSVKRLGGGEFFDRHGLLFLPTDEVAKVTGQFQSAVPLIEIMAGDPSIRGLTAALETG
LLGVTRGQITLDGAAAPFNTISQTVEDVLAKRAAFFSWRGLSSPEPLTDGDKRAFIEVKPILDFTELEPGRAATDAIRAA
ATELNLEQQFGARVRLTGPVPIANEEFSTVKEGAIVNGIGTVVVVLIILWMALHSSKIIFAVAANLFIGLAITTAVGLML
VDTLNLLSIAFAVLFVGLGVDFGIQFSVRYRSERHKTNDLNKALIQAAEYSAVPLSLAAMSTTAGFLSFLPTSYKGISEL
GEIAGAGMAIAFISSITVLPALIKLLNPAGEKEPLGYAFLAPLDRFLEVHRVGVIAGTIGVALAGLPLLYYMHFDFNPIN
LRSPKVESIATFLDLRKDPNTGANAINVLAPSEQAAKDIQAKLAKVPEVSRTLSLDTFVPADQPAKLKLIQAGAKVLEPA
LNPEQIDPPPTDQENIEALNSSVAALRKTAGDATGPGAEAARRLATALGALAKVDQATRDQAQAVFVTPLKLAFNQLRSM
LQAEPVTLDNLPQDIVSSWKAKDGQIRIEVLPNGDPNDNETLRKFAASVLQAEPNALGGPVSILKSGDTIVASFIQAGLW
ALLSISLLLWLTLRRISDVLLTLVPLLVAGAVTLEICVLIGLPLNFANIVALPLLLGIGVAFKIYYVVAWRAGRTNLLQS
ALTRAIFFSALTTATAFGSLWLSSHPGTASMGKLLALSLLTTLGAVLLFQPALMGKPRHIDETGDTDL
>Mature_868_residues
MLKSAIVSIVKASTRFASFTVLIGVLLAIASGFYTYQNFGINTDINHLISSDLDWRKRDIAFEKAFDQERLILAVVEAPT
PEFANAATAALTEKLSSNHKNFDSVKRLGGGEFFDRHGLLFLPTDEVAKVTGQFQSAVPLIEIMAGDPSIRGLTAALETG
LLGVTRGQITLDGAAAPFNTISQTVEDVLAKRAAFFSWRGLSSPEPLTDGDKRAFIEVKPILDFTELEPGRAATDAIRAA
ATELNLEQQFGARVRLTGPVPIANEEFSTVKEGAIVNGIGTVVVVLIILWMALHSSKIIFAVAANLFIGLAITTAVGLML
VDTLNLLSIAFAVLFVGLGVDFGIQFSVRYRSERHKTNDLNKALIQAAEYSAVPLSLAAMSTTAGFLSFLPTSYKGISEL
GEIAGAGMAIAFISSITVLPALIKLLNPAGEKEPLGYAFLAPLDRFLEVHRVGVIAGTIGVALAGLPLLYYMHFDFNPIN
LRSPKVESIATFLDLRKDPNTGANAINVLAPSEQAAKDIQAKLAKVPEVSRTLSLDTFVPADQPAKLKLIQAGAKVLEPA
LNPEQIDPPPTDQENIEALNSSVAALRKTAGDATGPGAEAARRLATALGALAKVDQATRDQAQAVFVTPLKLAFNQLRSM
LQAEPVTLDNLPQDIVSSWKAKDGQIRIEVLPNGDPNDNETLRKFAASVLQAEPNALGGPVSILKSGDTIVASFIQAGLW
ALLSISLLLWLTLRRISDVLLTLVPLLVAGAVTLEICVLIGLPLNFANIVALPLLLGIGVAFKIYYVVAWRAGRTNLLQS
ALTRAIFFSALTTATAFGSLWLSSHPGTASMGKLLALSLLTTLGAVLLFQPALMGKPRHIDETGDTDL

Specific function: Unknown

COG id: COG1033

COG function: function code R; Predicted exporters of the RND superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92513; Mature: 92513

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSAIVSIVKASTRFASFTVLIGVLLAIASGFYTYQNFGINTDINHLISSDLDWRKRDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHCCCCCHHHHHH
AFEKAFDQERLILAVVEAPTPEFANAATAALTEKLSSNHKNFDSVKRLGGGEFFDRHGLL
HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEECCCCEE
FLPTDEVAKVTGQFQSAVPLIEIMAGDPSIRGLTAALETGLLGVTRGQITLDGAAAPFNT
EECCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEECCCEEECCCCCCHHH
ISQTVEDVLAKRAAFFSWRGLSSPEPLTDGDKRAFIEVKPILDFTELEPGRAATDAIRAA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHCCCCCCHHHHHHHHH
ATELNLEQQFGARVRLTGPVPIANEEFSTVKEGAIVNGIGTVVVVLIILWMALHSSKIIF
HHHCCCHHHCCCEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
AVAANLFIGLAITTAVGLMLVDTLNLLSIAFAVLFVGLGVDFGIQFSVRYRSERHKTNDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHCCCHHH
NKALIQAAEYSAVPLSLAAMSTTAGFLSFLPTSYKGISELGEIAGAGMAIAFISSITVLP
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALIKLLNPAGEKEPLGYAFLAPLDRFLEVHRVGVIAGTIGVALAGLPLLYYMHFDFNPIN
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
LRSPKVESIATFLDLRKDPNTGANAINVLAPSEQAAKDIQAKLAKVPEVSRTLSLDTFVP
CCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHEECCCCCC
ADQPAKLKLIQAGAKVLEPALNPEQIDPPPTDQENIEALNSSVAALRKTAGDATGPGAEA
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ARRLATALGALAKVDQATRDQAQAVFVTPLKLAFNQLRSMLQAEPVTLDNLPQDIVSSWK
HHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
AKDGQIRIEVLPNGDPNDNETLRKFAASVLQAEPNALGGPVSILKSGDTIVASFIQAGLW
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHH
ALLSISLLLWLTLRRISDVLLTLVPLLVAGAVTLEICVLIGLPLNFANIVALPLLLGIGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AFKIYYVVAWRAGRTNLLQSALTRAIFFSALTTATAFGSLWLSSHPGTASMGKLLALSLL
HHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
TTLGAVLLFQPALMGKPRHIDETGDTDL
HHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKSAIVSIVKASTRFASFTVLIGVLLAIASGFYTYQNFGINTDINHLISSDLDWRKRDI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHCCCCCHHHHHH
AFEKAFDQERLILAVVEAPTPEFANAATAALTEKLSSNHKNFDSVKRLGGGEFFDRHGLL
HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEECCCCEE
FLPTDEVAKVTGQFQSAVPLIEIMAGDPSIRGLTAALETGLLGVTRGQITLDGAAAPFNT
EECCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCEEEECCCEEECCCCCCHHH
ISQTVEDVLAKRAAFFSWRGLSSPEPLTDGDKRAFIEVKPILDFTELEPGRAATDAIRAA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHCCCCCCHHHHHHHHH
ATELNLEQQFGARVRLTGPVPIANEEFSTVKEGAIVNGIGTVVVVLIILWMALHSSKIIF
HHHCCCHHHCCCEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
AVAANLFIGLAITTAVGLMLVDTLNLLSIAFAVLFVGLGVDFGIQFSVRYRSERHKTNDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHCCCHHH
NKALIQAAEYSAVPLSLAAMSTTAGFLSFLPTSYKGISELGEIAGAGMAIAFISSITVLP
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALIKLLNPAGEKEPLGYAFLAPLDRFLEVHRVGVIAGTIGVALAGLPLLYYMHFDFNPIN
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
LRSPKVESIATFLDLRKDPNTGANAINVLAPSEQAAKDIQAKLAKVPEVSRTLSLDTFVP
CCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHEECCCCCC
ADQPAKLKLIQAGAKVLEPALNPEQIDPPPTDQENIEALNSSVAALRKTAGDATGPGAEA
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ARRLATALGALAKVDQATRDQAQAVFVTPLKLAFNQLRSMLQAEPVTLDNLPQDIVSSWK
HHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
AKDGQIRIEVLPNGDPNDNETLRKFAASVLQAEPNALGGPVSILKSGDTIVASFIQAGLW
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHH
ALLSISLLLWLTLRRISDVLLTLVPLLVAGAVTLEICVLIGLPLNFANIVALPLLLGIGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AFKIYYVVAWRAGRTNLLQSALTRAIFFSALTTATAFGSLWLSSHPGTASMGKLLALSLL
HHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
TTLGAVLLFQPALMGKPRHIDETGDTDL
HHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA