| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748766
Identifier: 86748766
GI number: 86748766
Start: 1872997
End: 1874226
Strand: Direct
Name: 86748766
Synonym: RPB_1643
Alternate gene names: NA
Gene position: 1872997-1874226 (Clockwise)
Preceding gene: 86748765
Following gene: 86748767
Centisome position: 35.13
GC content: 64.88
Gene sequence:
>1230_bases ATGGTCCGCAACTACGTCATCGTCACGGCCTCCTATTGGGGCTTCACGCTGGTCGACGGCGCGTTGCGGATGCTGGTGCT ATTTCACTTCTTCCGACTGGGCTACACCCCGTTCACGCTGGCGTTTCTGTTTCTGCTGTATGAGGCAGCCGGCATCGCGG CGAATCTGGCGGGTGGCTACTTCGCCTCTCGATTCGGCATTCCGCGGATGCTGGCCATTGGTCAGGCGCTGCAGATCGCC GGCCTGTTGATGCTGTCGGCGCTCGATCCGGCATGGACCGTGGCGGCCTCGGTGGCCTGGGTGGTGGCGGCGCAGGGCAT CGCCGGCGTCGCCAAGGACCTGACCAAGACCGCTTCGAAATCCGCCATCAAGGCGACCTCGGCGGAGGGCAGCGGGCAGT TGTTCCGCTGGGTGGCCTGGTTCACCGGATCGAAGAACGCGATGAAGGGCATCGGCTTCTTCCTCGGTGGCCTGTTGCTC GACCTCGTCGGCTTTCGGCCCGCGCTCTGGCTGATGGCTGCGCTGCTCGGGGTGATCTTTGTCGCTGGTCTGGCTCTGCT GCCGCGCCAGCTCGGCAAGGCCAAGTCGTCGAAAACGATACGCGAACTGTTCGGCAAGTCGCGCGGCGTGAACCTGCTGG CCGCCGCCCGCATCTTCATGTTCGGGGCGAGGGACGTCTGGTTCGTCGTCGGCCTTCCTGTGTTCCTGTATGCCAACGGT TGGCGCTTTCTCGAGGTCGGCGGATTTCTGGCGGCGTGGACGATCGCTTATGGCGGCATCCAGGCAATCGCGCCGAGCCT GGTGACGCGGAGCGACGACGGCCTCAGCCGCGAAATCCCAGCGGCGCGACTATGGGCCTTGCTCCTCGCCGCGGTGCCGA TCGTGTTGGCCGTGGCGATGGTCGCAGTCCCGATGGTGCGCCCGGATCTGGTGCTGGTGATCGGTCTGGCGCTGTTCGGC GTGCCGTTCGCGGTGAATTCGTCGCTGCATTCCTATCTGATCCTGGCCTATGCCGGATCGGAAAAGGCCGCCGAGGATGT CGGCTTCTACTACGCGGCGAATGCGGCTGGGCGGCTGCTCGGGATCATTCTGTCGGGCGCGCTGTACCAGCTCGCGGGCA TCACCGGCTGTCTCATGGGATCTGCGGTCATGCTGCTGCTGTGCTGGCTGATCACGCTGGTGTTGCCGGTGACGGCTAGT CCAACTCCGATCCGACAGCAGCCGATCTGA
Upstream 100 bases:
>100_bases AGACGTTGCTGAAGGTCTATGCCTGGTACGACAACGAGGTCGGCTATGCCTGCCGGATGGTCGACCTCGCCGCCATCGTG CAACGCGCGGGCGTCTGACC
Downstream 100 bases:
>100_bases ATCCCCTCGACCGTTGTCCAAACACATCCGGCCCGAGCGGCCGTCTCAGAAAGCCGTATGAGATTGAGATGGATCAATAC ATTATGCGTATATGCGCATA
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; MFS Transporter; Transporter-Like Protein; Permease Of Facilitator Superfamily; Nitric Oxide Reductase Cytochrome B Subunit
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MVRNYVIVTASYWGFTLVDGALRMLVLFHFFRLGYTPFTLAFLFLLYEAAGIAANLAGGYFASRFGIPRMLAIGQALQIA GLLMLSALDPAWTVAASVAWVVAAQGIAGVAKDLTKTASKSAIKATSAEGSGQLFRWVAWFTGSKNAMKGIGFFLGGLLL DLVGFRPALWLMAALLGVIFVAGLALLPRQLGKAKSSKTIRELFGKSRGVNLLAAARIFMFGARDVWFVVGLPVFLYANG WRFLEVGGFLAAWTIAYGGIQAIAPSLVTRSDDGLSREIPAARLWALLLAAVPIVLAVAMVAVPMVRPDLVLVIGLALFG VPFAVNSSLHSYLILAYAGSEKAAEDVGFYYAANAAGRLLGIILSGALYQLAGITGCLMGSAVMLLLCWLITLVLPVTAS PTPIRQQPI
Sequences:
>Translated_409_residues MVRNYVIVTASYWGFTLVDGALRMLVLFHFFRLGYTPFTLAFLFLLYEAAGIAANLAGGYFASRFGIPRMLAIGQALQIA GLLMLSALDPAWTVAASVAWVVAAQGIAGVAKDLTKTASKSAIKATSAEGSGQLFRWVAWFTGSKNAMKGIGFFLGGLLL DLVGFRPALWLMAALLGVIFVAGLALLPRQLGKAKSSKTIRELFGKSRGVNLLAAARIFMFGARDVWFVVGLPVFLYANG WRFLEVGGFLAAWTIAYGGIQAIAPSLVTRSDDGLSREIPAARLWALLLAAVPIVLAVAMVAVPMVRPDLVLVIGLALFG VPFAVNSSLHSYLILAYAGSEKAAEDVGFYYAANAAGRLLGIILSGALYQLAGITGCLMGSAVMLLLCWLITLVLPVTAS PTPIRQQPI >Mature_409_residues MVRNYVIVTASYWGFTLVDGALRMLVLFHFFRLGYTPFTLAFLFLLYEAAGIAANLAGGYFASRFGIPRMLAIGQALQIA GLLMLSALDPAWTVAASVAWVVAAQGIAGVAKDLTKTASKSAIKATSAEGSGQLFRWVAWFTGSKNAMKGIGFFLGGLLL DLVGFRPALWLMAALLGVIFVAGLALLPRQLGKAKSSKTIRELFGKSRGVNLLAAARIFMFGARDVWFVVGLPVFLYANG WRFLEVGGFLAAWTIAYGGIQAIAPSLVTRSDDGLSREIPAARLWALLLAAVPIVLAVAMVAVPMVRPDLVLVIGLALFG VPFAVNSSLHSYLILAYAGSEKAAEDVGFYYAANAAGRLLGIILSGALYQLAGITGCLMGSAVMLLLCWLITLVLPVTAS PTPIRQQPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43428; Mature: 43428
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRNYVIVTASYWGFTLVDGALRMLVLFHFFRLGYTPFTLAFLFLLYEAAGIAANLAGGY CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHH FASRFGIPRMLAIGQALQIAGLLMLSALDPAWTVAASVAWVVAAQGIAGVAKDLTKTASK HHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIKATSAEGSGQLFRWVAWFTGSKNAMKGIGFFLGGLLLDLVGFRPALWLMAALLGVIF HHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VAGLALLPRQLGKAKSSKTIRELFGKSRGVNLLAAARIFMFGARDVWFVVGLPVFLYANG HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC WRFLEVGGFLAAWTIAYGGIQAIAPSLVTRSDDGLSREIPAARLWALLLAAVPIVLAVAM CEEEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VAVPMVRPDLVLVIGLALFGVPFAVNSSLHSYLILAYAGSEKAAEDVGFYYAANAAGRLL HHHHCCCCHHHHHHHHHHHCCCHHHCCCHHHEEEEEECCCCHHHHHCCCEEECCHHHHHH GIILSGALYQLAGITGCLMGSAVMLLLCWLITLVLPVTASPTPIRQQPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MVRNYVIVTASYWGFTLVDGALRMLVLFHFFRLGYTPFTLAFLFLLYEAAGIAANLAGGY CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHH FASRFGIPRMLAIGQALQIAGLLMLSALDPAWTVAASVAWVVAAQGIAGVAKDLTKTASK HHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIKATSAEGSGQLFRWVAWFTGSKNAMKGIGFFLGGLLLDLVGFRPALWLMAALLGVIF HHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VAGLALLPRQLGKAKSSKTIRELFGKSRGVNLLAAARIFMFGARDVWFVVGLPVFLYANG HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC WRFLEVGGFLAAWTIAYGGIQAIAPSLVTRSDDGLSREIPAARLWALLLAAVPIVLAVAM CEEEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VAVPMVRPDLVLVIGLALFGVPFAVNSSLHSYLILAYAGSEKAAEDVGFYYAANAAGRLL HHHHCCCCHHHHHHHHHHHCCCHHHCCCHHHEEEEEECCCCHHHHHCCCEEECCHHHHHH GIILSGALYQLAGITGCLMGSAVMLLLCWLITLVLPVTASPTPIRQQPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA