| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is mviN [H]
Identifier: 86748734
GI number: 86748734
Start: 1814540
End: 1816144
Strand: Direct
Name: mviN [H]
Synonym: RPB_1610
Alternate gene names: 86748734
Gene position: 1814540-1816144 (Clockwise)
Preceding gene: 86748733
Following gene: 86748736
Centisome position: 34.03
GC content: 68.22
Gene sequence:
>1605_bases ATGACTGCGGGGAAGCTGGCTCTCGGCACTCATTCCCGGTTTTGCGGTCTCGCCACTTCCTGTAGAAGCGAGCCTATGCT CAGGCGCATTTTCACCGTCGGCGGCTTCACCCTCCTGTCGCGTGTGACCGGCTTTGCCCGCGACATCCTGCTCGCGGCGA TTCTCGGCGCAGGCCCGATCGCCGACGCCTTCTTCGTGGCGCTGCGGCTGCCCAATCATTTCCGGGCGATATTCGCCGAG GGCGCCTTCAATGCCGCCTTCGTGCCGGCCTATGCCCACGTCCACGGCGAGAAGGGCGAGACGTCGGCGAAGCTGTTCGC CGACCGCATCTTCACGCTGCTGTTCGCGTCGCAGCTCGTGCTGTTGGCGGTGGCGCTGGTGTTCATGCCGCAACTGATGA GCGTCCTGGCGCCGGGCTTCACCGACGATCCGGCGCAGCGCGCGCTGGCGATCGAGCTGACGCGCATCACCTTCCCCTAT CTGCTGCTGATCACGCTGGTGACGCTGTATGGCGGCATTCTCAACGTGATGCAGCGCTTCGCCAGCGCGGCGGCGGCGTC GATCTTCCTGAACATTTCGATGATGGCGACGCTGGCGCTCGCCGCCTTCTTCCCGACCGCCGGCCACGCCGCCGCCTGGG GCGTGCTGATCTCCGGCTTCCTGCAGTACTTCTTGCTCGCCGGCGATCTTTCGCTGCATGGCGGGCTGCCGCGCTTCGCC CGGCCGAAGCTCGACGTCGATGTCCGCGCCTTCTTCCGCGCATTGGGACCGGCGACGGTCGGTTCGATGGGCACGCAGCT CGCGCTGTTCGCCGACACCATCATCGCCACCTTCCTGCCGGTCGGCGCGCTGTCGGCGCTGTACTACGCCGATCGCCTCA ACCAGTTGCCAATCGGGGTGATCGGCATCGCCATCGGCACGGTGCTGCTCCCGGAGATGTCGCGGCAGCTCACGGCCGGC GACGATGCCGGCGCCAAGGCCTCGCAGCGGCGCGCCTTCGAGTTCACGCTGCTGTTCTCGGTGCCGTTCGTCGCCGCGTT TCTCACGGTGCCGGACGCGATCATGCGAGCGATGTTCGCGCGCGGCGCCTTCACCCGGGCGGACGCGATCGCGGCCGGGG CGACGTTGGCGGCCTATGCGATCGCGCTGATTCCGTTCGTGCTGATCCGCAGCGCGGTGGCGCCGTTCTACGCCCGCAAG GACACCGCGACGCCGGTGAAGGCGGCGCTCACCGGCGTCGCCGCCAATGTGGTGCTGAAGGTGCTGCTGATGGGGCCGCT GGCGCAGGTCGGGCTCGCGCTCGCCACCGCCGCCGGCGCCTGGATCAACCTGCTGCTGGTGATCTTCTTCTCGGTGCGCG CCGGCTATCTCGAATTCGACCGCGCGCTCTCTTCGGCGATCGTCAAGTTTCTCGCGACCGGCCTGCTGCTCGGCGCGGCA CTGTGGGCGACCGCATGGTTCGCCGCGCCGTATCTCGCGCAATTGCCGTCGCTGCGCGACGAGGCCGCGCTGCTGCTGCT GATCGGCGTCGGCGCCGTGGTTTACGGCGCCGCGATTCTCGTGTTGTTCGGGCCGCGCTGGATCAAGGCGCTGCTGCGGG GTTGA
Upstream 100 bases:
>100_bases AGCACCGTCATTCCGGGGCGCTCGCGAAAGCGAGCGAACCCGGAATCTGAAACCCGCACAATCGCGGGATTCCGGGTTCG CGCCTTCGGCGCGCCCCGGA
Downstream 100 bases:
>100_bases TCAAACCTCAACCCACCCGCGTCGTCGAGCGCACCAGATTGGCGACGTCGGAATAGACTTCAAGCATCGGGTTGATGAAA CGGTGCGCCTTGTTCTTCGA
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 534; Mature: 533
Protein sequence:
>534_residues MTAGKLALGTHSRFCGLATSCRSEPMLRRIFTVGGFTLLSRVTGFARDILLAAILGAGPIADAFFVALRLPNHFRAIFAE GAFNAAFVPAYAHVHGEKGETSAKLFADRIFTLLFASQLVLLAVALVFMPQLMSVLAPGFTDDPAQRALAIELTRITFPY LLLITLVTLYGGILNVMQRFASAAAASIFLNISMMATLALAAFFPTAGHAAAWGVLISGFLQYFLLAGDLSLHGGLPRFA RPKLDVDVRAFFRALGPATVGSMGTQLALFADTIIATFLPVGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRQLTAG DDAGAKASQRRAFEFTLLFSVPFVAAFLTVPDAIMRAMFARGAFTRADAIAAGATLAAYAIALIPFVLIRSAVAPFYARK DTATPVKAALTGVAANVVLKVLLMGPLAQVGLALATAAGAWINLLLVIFFSVRAGYLEFDRALSSAIVKFLATGLLLGAA LWATAWFAAPYLAQLPSLRDEAALLLLIGVGAVVYGAAILVLFGPRWIKALLRG
Sequences:
>Translated_534_residues MTAGKLALGTHSRFCGLATSCRSEPMLRRIFTVGGFTLLSRVTGFARDILLAAILGAGPIADAFFVALRLPNHFRAIFAE GAFNAAFVPAYAHVHGEKGETSAKLFADRIFTLLFASQLVLLAVALVFMPQLMSVLAPGFTDDPAQRALAIELTRITFPY LLLITLVTLYGGILNVMQRFASAAAASIFLNISMMATLALAAFFPTAGHAAAWGVLISGFLQYFLLAGDLSLHGGLPRFA RPKLDVDVRAFFRALGPATVGSMGTQLALFADTIIATFLPVGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRQLTAG DDAGAKASQRRAFEFTLLFSVPFVAAFLTVPDAIMRAMFARGAFTRADAIAAGATLAAYAIALIPFVLIRSAVAPFYARK DTATPVKAALTGVAANVVLKVLLMGPLAQVGLALATAAGAWINLLLVIFFSVRAGYLEFDRALSSAIVKFLATGLLLGAA LWATAWFAAPYLAQLPSLRDEAALLLLIGVGAVVYGAAILVLFGPRWIKALLRG >Mature_533_residues TAGKLALGTHSRFCGLATSCRSEPMLRRIFTVGGFTLLSRVTGFARDILLAAILGAGPIADAFFVALRLPNHFRAIFAEG AFNAAFVPAYAHVHGEKGETSAKLFADRIFTLLFASQLVLLAVALVFMPQLMSVLAPGFTDDPAQRALAIELTRITFPYL LLITLVTLYGGILNVMQRFASAAAASIFLNISMMATLALAAFFPTAGHAAAWGVLISGFLQYFLLAGDLSLHGGLPRFAR PKLDVDVRAFFRALGPATVGSMGTQLALFADTIIATFLPVGALSALYYADRLNQLPIGVIGIAIGTVLLPEMSRQLTAGD DAGAKASQRRAFEFTLLFSVPFVAAFLTVPDAIMRAMFARGAFTRADAIAAGATLAAYAIALIPFVLIRSAVAPFYARKD TATPVKAALTGVAANVVLKVLLMGPLAQVGLALATAAGAWINLLLVIFFSVRAGYLEFDRALSSAIVKFLATGLLLGAAL WATAWFAAPYLAQLPSLRDEAALLLLIGVGAVVYGAAILVLFGPRWIKALLRG
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=444, Percent_Identity=35.8108108108108, Blast_Score=251, Evalue=1e-67,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 56377; Mature: 56245
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGKLALGTHSRFCGLATSCRSEPMLRRIFTVGGFTLLSRVTGFARDILLAAILGAGPI CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ADAFFVALRLPNHFRAIFAEGAFNAAFVPAYAHVHGEKGETSAKLFADRIFTLLFASQLV HHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LLAVALVFMPQLMSVLAPGFTDDPAQRALAIELTRITFPYLLLITLVTLYGGILNVMQRF HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASAAAASIFLNISMMATLALAAFFPTAGHAAAWGVLISGFLQYFLLAGDLSLHGGLPRFA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCC RPKLDVDVRAFFRALGPATVGSMGTQLALFADTIIATFLPVGALSALYYADRLNQLPIGV CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IGIAIGTVLLPEMSRQLTAGDDAGAKASQRRAFEFTLLFSVPFVAAFLTVPDAIMRAMFA HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGAFTRADAIAAGATLAAYAIALIPFVLIRSAVAPFYARKDTATPVKAALTGVAANVVLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VLLMGPLAQVGLALATAAGAWINLLLVIFFSVRAGYLEFDRALSSAIVKFLATGLLLGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWATAWFAAPYLAQLPSLRDEAALLLLIGVGAVVYGAAILVLFGPRWIKALLRG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC >Mature Secondary Structure TAGKLALGTHSRFCGLATSCRSEPMLRRIFTVGGFTLLSRVTGFARDILLAAILGAGPI CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ADAFFVALRLPNHFRAIFAEGAFNAAFVPAYAHVHGEKGETSAKLFADRIFTLLFASQLV HHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LLAVALVFMPQLMSVLAPGFTDDPAQRALAIELTRITFPYLLLITLVTLYGGILNVMQRF HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASAAAASIFLNISMMATLALAAFFPTAGHAAAWGVLISGFLQYFLLAGDLSLHGGLPRFA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCC RPKLDVDVRAFFRALGPATVGSMGTQLALFADTIIATFLPVGALSALYYADRLNQLPIGV CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IGIAIGTVLLPEMSRQLTAGDDAGAKASQRRAFEFTLLFSVPFVAAFLTVPDAIMRAMFA HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGAFTRADAIAAGATLAAYAIALIPFVLIRSAVAPFYARKDTATPVKAALTGVAANVVLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VLLMGPLAQVGLALATAAGAWINLLLVIFFSVRAGYLEFDRALSSAIVKFLATGLLLGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWATAWFAAPYLAQLPSLRDEAALLLLIGVGAVVYGAAILVLFGPRWIKALLRG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA