Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is yxjG [H]

Identifier: 86748709

GI number: 86748709

Start: 1783538

End: 1784656

Strand: Direct

Name: yxjG [H]

Synonym: RPB_1584

Alternate gene names: 86748709

Gene position: 1783538-1784656 (Clockwise)

Preceding gene: 86748708

Following gene: 86748711

Centisome position: 33.45

GC content: 62.73

Gene sequence:

>1119_bases
ATGCAAAGAACCAAAGCCCCGTTCCGAGCCGACGAGGTCGGCAGCCTGTTGCGGCCGCAGAGCATCAAGGAGGCGCGCGC
CAGGCTGGAGAAGGGCGAAATCTCCGCCGCCGATCTGAAGAAGATCGAGGACATGGAGATCGAGAAGATCGTCCACAAGC
AGTCGGCGATCGGCCTCAAGCTCGCCACTGACGGCGAATTCCGCCGCTCCTGGTGGCACTTCGATTTCCTGGCCAAGCTG
ACCGGCTGCGAACTCTACCATCCCGACACCGGCATCCAGTTCGCCGGCGTGCAGACCCGCAATGATTCGATCCGGGTGAT
CGGCAAGCTCGACTTTCCCGACGACCATCCGATGCTCGAGCATTTCCGCTTCCTGAAGAAGCACGCCGACGTCGCCCATG
TCACCGCCAAGATGACGATCCCGTCGCCGGCGGTGCTGCATTTCCGCGGCGGCCGCAAGGCGATCTCCAAGGAGGTCTAT
CCCGATCTCGACGGCTTCTTCGAGGATCTGGCCAAGACCTACCGCAAGGCGGTGAAGGCGTTCTACGACGCCGGCTGCCG
CTATCTGCAGTTCGACGACACCGTGTGGGCTTATCTGTGCTCGCCGGACGAACTGGAGAAGGCCCGCGCCCGCGGCGACG
ATCCGGACAATCTGCAGCAGATCTACGCCCGTGTGATCAACTACGCGATCGCCGAACGCCCGGCCGATATGGTGATCACT
ACCCACGTCTGCCGCGGCAATTTCCGCTCGACCTGGATCTCCTCCGGCGGCTACGAGCCGGTGGCCGAGACGCTGCTCGC
CGGCATCAATTACGACGGCTATTTCCTGGAATACGATTCCGAACGCGCCGGCGGCTTCGAGCCGCTGCGGTTTTTGCCGA
AGGGCAACAAGGTCGTGGTGGTCGGCGTCATCACCTCGAAATTCGGCGAGCTGGAAAACAAGGACGACATCAAGCGTCGT
CTGGAGGAAGCCGCCAAATTCGCGCCGCTGGAGCAGCTCGCACTGTCGCCGCAATGCGGCTTCGCCTCGACCGAGGAAGG
CAACATCCTCAGCGAGCAGGAGCAGTGGGACAAGCTGCAGCTTGCGGTCGAAGTGTCGCGCGAGGTCTGGGGCAAGTAG

Upstream 100 bases:

>100_bases
CCAGCGCGGCGCTGAAGGACGACCCCGCCACGCTGGAACGCTATCTCGGCGTCTCTGGCGCCGCCGGTACCAAACACTGA
ACTTGTTAGGGAGTGAAACG

Downstream 100 bases:

>100_bases
GCCGCACCCTCGTCATTGCGAGGTGCGCAGCGACGAAGCAATCCAGGATCTTACGCTCGGCGCACTGGATTGCTTCGCTT
CGCTCGCAATGACGGCGATT

Product: 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MQRTKAPFRADEVGSLLRPQSIKEARARLEKGEISAADLKKIEDMEIEKIVHKQSAIGLKLATDGEFRRSWWHFDFLAKL
TGCELYHPDTGIQFAGVQTRNDSIRVIGKLDFPDDHPMLEHFRFLKKHADVAHVTAKMTIPSPAVLHFRGGRKAISKEVY
PDLDGFFEDLAKTYRKAVKAFYDAGCRYLQFDDTVWAYLCSPDELEKARARGDDPDNLQQIYARVINYAIAERPADMVIT
THVCRGNFRSTWISSGGYEPVAETLLAGINYDGYFLEYDSERAGGFEPLRFLPKGNKVVVVGVITSKFGELENKDDIKRR
LEEAAKFAPLEQLALSPQCGFASTEEGNILSEQEQWDKLQLAVEVSREVWGK

Sequences:

>Translated_372_residues
MQRTKAPFRADEVGSLLRPQSIKEARARLEKGEISAADLKKIEDMEIEKIVHKQSAIGLKLATDGEFRRSWWHFDFLAKL
TGCELYHPDTGIQFAGVQTRNDSIRVIGKLDFPDDHPMLEHFRFLKKHADVAHVTAKMTIPSPAVLHFRGGRKAISKEVY
PDLDGFFEDLAKTYRKAVKAFYDAGCRYLQFDDTVWAYLCSPDELEKARARGDDPDNLQQIYARVINYAIAERPADMVIT
THVCRGNFRSTWISSGGYEPVAETLLAGINYDGYFLEYDSERAGGFEPLRFLPKGNKVVVVGVITSKFGELENKDDIKRR
LEEAAKFAPLEQLALSPQCGFASTEEGNILSEQEQWDKLQLAVEVSREVWGK
>Mature_372_residues
MQRTKAPFRADEVGSLLRPQSIKEARARLEKGEISAADLKKIEDMEIEKIVHKQSAIGLKLATDGEFRRSWWHFDFLAKL
TGCELYHPDTGIQFAGVQTRNDSIRVIGKLDFPDDHPMLEHFRFLKKHADVAHVTAKMTIPSPAVLHFRGGRKAISKEVY
PDLDGFFEDLAKTYRKAVKAFYDAGCRYLQFDDTVWAYLCSPDELEKARARGDDPDNLQQIYARVINYAIAERPADMVIT
THVCRGNFRSTWISSGGYEPVAETLLAGINYDGYFLEYDSERAGGFEPLRFLPKGNKVVVVGVITSKFGELENKDDIKRR
LEEAAKFAPLEQLALSPQCGFASTEEGNILSEQEQWDKLQLAVEVSREVWGK

Specific function: Unknown

COG id: COG0620

COG function: function code E; Methionine synthase II (cobalamin-independent)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yxjH [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002629 [H]

Pfam domain/function: PF01717 Meth_synt_2 [H]

EC number: NA

Molecular weight: Translated: 42171; Mature: 42171

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTKAPFRADEVGSLLRPQSIKEARARLEKGEISAADLKKIEDMEIEKIVHKQSAIGLK
CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEE
LATDGEFRRSWWHFDFLAKLTGCELYHPDTGIQFAGVQTRNDSIRVIGKLDFPDDHPMLE
EECCCHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECCCCEEEEEEECCCCCCHHHH
HFRFLKKHADVAHVTAKMTIPSPAVLHFRGGRKAISKEVYPDLDGFFEDLAKTYRKAVKA
HHHHHHHCCCHHEEEEEEECCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
FYDAGCRYLQFDDTVWAYLCSPDELEKARARGDDPDNLQQIYARVINYAIAERPADMVIT
HHHCCCEEEEECCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
THVCRGNFRSTWISSGGYEPVAETLLAGINYDGYFLEYDSERAGGFEPLRFLPKGNKVVV
EHHHCCCCHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHCCCCCCEEEE
VGVITSKFGELENKDDIKRRLEEAAKFAPLEQLALSPQCGFASTEEGNILSEQEQWDKLQ
EEEHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
LAVEVSREVWGK
HHHHHHHHHCCC
>Mature Secondary Structure
MQRTKAPFRADEVGSLLRPQSIKEARARLEKGEISAADLKKIEDMEIEKIVHKQSAIGLK
CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEE
LATDGEFRRSWWHFDFLAKLTGCELYHPDTGIQFAGVQTRNDSIRVIGKLDFPDDHPMLE
EECCCHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEEECCCCEEEEEEECCCCCCHHHH
HFRFLKKHADVAHVTAKMTIPSPAVLHFRGGRKAISKEVYPDLDGFFEDLAKTYRKAVKA
HHHHHHHCCCHHEEEEEEECCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
FYDAGCRYLQFDDTVWAYLCSPDELEKARARGDDPDNLQQIYARVINYAIAERPADMVIT
HHHCCCEEEEECCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
THVCRGNFRSTWISSGGYEPVAETLLAGINYDGYFLEYDSERAGGFEPLRFLPKGNKVVV
EHHHCCCCHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHCCCCCCEEEE
VGVITSKFGELENKDDIKRRLEEAAKFAPLEQLALSPQCGFASTEEGNILSEQEQWDKLQ
EEEHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
LAVEVSREVWGK
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377; 10568751 [H]