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The map label for this gene is 86748704

Identifier: 86748704

GI number: 86748704

Start: 1778653

End: 1779831

Strand: Direct

Name: 86748704

Synonym: RPB_1579

Alternate gene names: NA

Gene position: 1778653-1779831 (Clockwise)

Preceding gene: 162138522

Following gene: 86748705

Centisome position: 33.36

GC content: 64.38

Gene sequence:

>1179_bases
ATGCTGATGGGCAGACGAACACTGCTGCAGGCCGCCTGCATCGCGCTCGCAACCGCGGCTCCGATCGCTGCGGCGCAGGC
TCAGGAGACCTTCAAGGTCGGCCTGATCGTGCCGATGACCGGAGGCCAGGCCTCGACCGGCAAGCAGATCGACAACGCGA
TCAAGCTCTACATCAAAAAGCACGGCGATACCGTCGCCGGCAAGAAGATCGAAGTGATCCTCAAGGACGACGCCGCGATT
CCGGACAACACCAAGCGGATGGCGCAGGAGCTGATCGTCAACGACAAGGTCAATGTGATCGCCGGCTTCGGCATCACCCC
GGCCGCGCTCGCCGCGGCGCCGCTGGCGACGCAAGCCAAGGTGCCGCAGGTGGTGATGGCCGCCGGCACCTCGATCATCA
CCGAGCGATCGCCCTACATCGTCCGCACCTCGTTCACGCTGGCGCAGTCCTCCACCATCATCGGCGACTGGGCCGCCAAG
AACGGCATCAAGAAGGTCGCGACGCTGACCTCGGACTACGCGCCGGGCAACGACGCGCTGGCGGCGTTCAAGCAGCACTT
CACCGCCGGCGGCGGCGCGATCGTCGAAGAGATCAAGGTGCCGCTCGCCAATCCGGACTTCGCGCCGTTCCTGCAGCGCA
TGAAGGACGCCAAGCCGGACGCGATGTTCGTGTTCGTGCCGGCCGGGCAGGGTGGCAGCTTCATGAAGCAGTTCGCCGAG
CGCGGCCTCGACAAGAGCGGCATCAAGGTGATCGGCCCCGGCGACGTGATGGACGACGACCTCCTGAACAGCATGGGCGA
TGCGGCGCTGGGCGTGGTCACCGCGCACATGTATTCGGCGGCGCATCCCTCGGCGATGAACAAGGAGTTCGTCGCCACCT
ACAAGAAGGATTTCGGCCAGCGGCCGGGCTTCATGGCGGTCGGCGGCTACGACGGCATCCATCTGATCTACGAGGCGCTG
AAGAAGACCGGCGGCAAGACCGACGGCGATTCGCTGCTCGCGGCGATGAAAGGGATGAGCTGGGAAAGCCCGCGCGGCCC
GATCTCGATCGACCCGGAAACCCGCGACATCGTCCAGGATATCTACATCCGCAAGGTGGAAAAGGTCGACGGCGAACTCT
ACAACATCGAATTCGCCAAATTCGACGCCGTGAAGGACCCCGGCAAGACGAAGAAGTAA

Upstream 100 bases:

>100_bases
GCGCTCCAGCCTGCAAGACACAGCGGCGCCATCTCGGCTAGGATACGGACCGGGGCAAAGCCCTCGGGACGAGACGCACA
GGGGACAAGAGGAAACACTC

Downstream 100 bases:

>100_bases
GGCGGAGCTCCGCGTGCTGAGGTCGATACTCCCCGCCACCCCATCGACGTCGTGCCCGGGCTTGTCCCGGGCATCCACGA
ACTGCGGTGCATGGGGCTCG

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MLMGRRTLLQAACIALATAAPIAAAQAQETFKVGLIVPMTGGQASTGKQIDNAIKLYIKKHGDTVAGKKIEVILKDDAAI
PDNTKRMAQELIVNDKVNVIAGFGITPAALAAAPLATQAKVPQVVMAAGTSIITERSPYIVRTSFTLAQSSTIIGDWAAK
NGIKKVATLTSDYAPGNDALAAFKQHFTAGGGAIVEEIKVPLANPDFAPFLQRMKDAKPDAMFVFVPAGQGGSFMKQFAE
RGLDKSGIKVIGPGDVMDDDLLNSMGDAALGVVTAHMYSAAHPSAMNKEFVATYKKDFGQRPGFMAVGGYDGIHLIYEAL
KKTGGKTDGDSLLAAMKGMSWESPRGPISIDPETRDIVQDIYIRKVEKVDGELYNIEFAKFDAVKDPGKTKK

Sequences:

>Translated_392_residues
MLMGRRTLLQAACIALATAAPIAAAQAQETFKVGLIVPMTGGQASTGKQIDNAIKLYIKKHGDTVAGKKIEVILKDDAAI
PDNTKRMAQELIVNDKVNVIAGFGITPAALAAAPLATQAKVPQVVMAAGTSIITERSPYIVRTSFTLAQSSTIIGDWAAK
NGIKKVATLTSDYAPGNDALAAFKQHFTAGGGAIVEEIKVPLANPDFAPFLQRMKDAKPDAMFVFVPAGQGGSFMKQFAE
RGLDKSGIKVIGPGDVMDDDLLNSMGDAALGVVTAHMYSAAHPSAMNKEFVATYKKDFGQRPGFMAVGGYDGIHLIYEAL
KKTGGKTDGDSLLAAMKGMSWESPRGPISIDPETRDIVQDIYIRKVEKVDGELYNIEFAKFDAVKDPGKTKK
>Mature_392_residues
MLMGRRTLLQAACIALATAAPIAAAQAQETFKVGLIVPMTGGQASTGKQIDNAIKLYIKKHGDTVAGKKIEVILKDDAAI
PDNTKRMAQELIVNDKVNVIAGFGITPAALAAAPLATQAKVPQVVMAAGTSIITERSPYIVRTSFTLAQSSTIIGDWAAK
NGIKKVATLTSDYAPGNDALAAFKQHFTAGGGAIVEEIKVPLANPDFAPFLQRMKDAKPDAMFVFVPAGQGGSFMKQFAE
RGLDKSGIKVIGPGDVMDDDLLNSMGDAALGVVTAHMYSAAHPSAMNKEFVATYKKDFGQRPGFMAVGGYDGIHLIYEAL
KKTGGKTDGDSLLAAMKGMSWESPRGPISIDPETRDIVQDIYIRKVEKVDGELYNIEFAKFDAVKDPGKTKK

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 41638; Mature: 41638

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMGRRTLLQAACIALATAAPIAAAQAQETFKVGLIVPMTGGQASTGKQIDNAIKLYIKK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHC
HGDTVAGKKIEVILKDDAAIPDNTKRMAQELIVNDKVNVIAGFGITPAALAAAPLATQAK
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCHHHHC
VPQVVMAAGTSIITERSPYIVRTSFTLAQSSTIIGDWAAKNGIKKVATLTSDYAPGNDAL
CCHHHHHCCCCEEECCCCEEEEEEEEECCCCCEEECHHHHCCHHHHHHHHCCCCCCHHHH
AAFKQHFTAGGGAIVEEIKVPLANPDFAPFLQRMKDAKPDAMFVFVPAGQGGSFMKQFAE
HHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHH
RGLDKSGIKVIGPGDVMDDDLLNSMGDAALGVVTAHMYSAAHPSAMNKEFVATYKKDFGQ
CCCCCCCCEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
RPGFMAVGGYDGIHLIYEALKKTGGKTDGDSLLAAMKGMSWESPRGPISIDPETRDIVQD
CCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHH
IYIRKVEKVDGELYNIEFAKFDAVKDPGKTKK
HHHHHHHHHCCEEEEEEEHHCCCCCCCCCCCC
>Mature Secondary Structure
MLMGRRTLLQAACIALATAAPIAAAQAQETFKVGLIVPMTGGQASTGKQIDNAIKLYIKK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHHC
HGDTVAGKKIEVILKDDAAIPDNTKRMAQELIVNDKVNVIAGFGITPAALAAAPLATQAK
CCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCHHHHC
VPQVVMAAGTSIITERSPYIVRTSFTLAQSSTIIGDWAAKNGIKKVATLTSDYAPGNDAL
CCHHHHHCCCCEEECCCCEEEEEEEEECCCCCEEECHHHHCCHHHHHHHHCCCCCCHHHH
AAFKQHFTAGGGAIVEEIKVPLANPDFAPFLQRMKDAKPDAMFVFVPAGQGGSFMKQFAE
HHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHH
RGLDKSGIKVIGPGDVMDDDLLNSMGDAALGVVTAHMYSAAHPSAMNKEFVATYKKDFGQ
CCCCCCCCEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
RPGFMAVGGYDGIHLIYEALKKTGGKTDGDSLLAAMKGMSWESPRGPISIDPETRDIVQD
CCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHH
IYIRKVEKVDGELYNIEFAKFDAVKDPGKTKK
HHHHHHHHHCCEEEEEEEHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA