| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
Click here to switch to the map view.
The map label for this gene is 86748635
Identifier: 86748635
GI number: 86748635
Start: 1702849
End: 1703529
Strand: Direct
Name: 86748635
Synonym: RPB_1510
Alternate gene names: NA
Gene position: 1702849-1703529 (Clockwise)
Preceding gene: 86748634
Following gene: 86748638
Centisome position: 31.94
GC content: 65.93
Gene sequence:
>681_bases ATGAATGTCATCGTTTTTGCTTCGCGTAAGGGCGGCTCCGGGAAAAGTACCCTGACCGCGCATCTGGCTGCTCACGTCAA CAAAGCGTCGCGCCCGTGTCTGCTGATCGATGCCGATCCTCAGGGGTCGCTGACATTGTGGCACAAGCTGCGTGGTACCA ATGAGCCGCCGCTGCGCACCGCGACGCGGTCGGTCGGCGAGATCATCGCATCCGCCAAGCGCGACGGCATCGAATGGGTG TTCATCGACACGCCGCCGAATCTGTCCGCGGTGGTGGAGGACGCGATCCGCAACGCGACGATGGTGATCATTCCGGCGCG CCCGGGCGTGTTCGACGTCAACGCGGTGCAGGATACGATTCAGACCTGTCGTGCCAACCGCAAGCCTTACGCCATCGTGC TCAACGGTGCACCGGCTCTGCGCGGCGAGGGTGAAAGCCGGATCGTGACGATCGCCCGCGATGCGCTGGCCAAGTTCAAG GCGCCGGTCTGGGGCGGCCAGATCACCAACCGCGCCGATCTGCTGATGGCGCTCGGCGAGGGGCAGGGCGCCCGCGAATA TGCGGCAGAAGGCCGCGCCGCCTACGAGATCAACCGTCTCTGGGCCGCGATCGAGCGTTCGGTGAAGGCGATCCGTGGGG CCGGCTCGGCCGGCGGTGCCATGCACAAGCAGGCCGCGTGA
Upstream 100 bases:
>100_bases ACAATTCGGCGAGGTATGACTCGCTGCATGCAATTTTGTCTTTCACGAATCAGCGTCCTGATTCACCTTTGTCAACTATT GGTGAATGGGAGGCCATCGT
Downstream 100 bases:
>100_bases GTTCACTCGACTAAGGCGCGCGCGGGATCCCGCGCGTTCATCGTTGCAGGTCGGCCGAGCACTGTGCTGTCCGCGCCGTC GTCGATCTGGACAGGCATCC
Product: cobyrinic acid a,c-diamide synthase
Products: NA
Alternate protein names: Cobyrinic Acid Ac-Diamide Synthase; Partition Protein; ParA-Like Protein; ATPase ParA Type; ParA Family Partition Protein; Plasmid Partitioning-Family Protein; Chromosome Partitioning ATPase; Partition Protein A; Partition-Related Protein; Plasmid Partitioning Protein; ParA Plasmid Partitioning Protein; Plasmid Partitioning Protein-Like; ParA Family Plasmid Partitioning Protein; ParA Family Protein; Soj/ParA-Related ATPase Protein; CobQ/CobB/MinD/ParA Domain-Containing Protein; Plasmid Partitioning Family Protein ParA/MinD; ATPases Involved In Chromosome Partitioning-Like Protein; Partitioning Protein; ATPase Putative Partition Protein; ATPase; MinD/ParA Family ATPase; Plasmid Stability Protein ParA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MNVIVFASRKGGSGKSTLTAHLAAHVNKASRPCLLIDADPQGSLTLWHKLRGTNEPPLRTATRSVGEIIASAKRDGIEWV FIDTPPNLSAVVEDAIRNATMVIIPARPGVFDVNAVQDTIQTCRANRKPYAIVLNGAPALRGEGESRIVTIARDALAKFK APVWGGQITNRADLLMALGEGQGAREYAAEGRAAYEINRLWAAIERSVKAIRGAGSAGGAMHKQAA
Sequences:
>Translated_226_residues MNVIVFASRKGGSGKSTLTAHLAAHVNKASRPCLLIDADPQGSLTLWHKLRGTNEPPLRTATRSVGEIIASAKRDGIEWV FIDTPPNLSAVVEDAIRNATMVIIPARPGVFDVNAVQDTIQTCRANRKPYAIVLNGAPALRGEGESRIVTIARDALAKFK APVWGGQITNRADLLMALGEGQGAREYAAEGRAAYEINRLWAAIERSVKAIRGAGSAGGAMHKQAA >Mature_226_residues MNVIVFASRKGGSGKSTLTAHLAAHVNKASRPCLLIDADPQGSLTLWHKLRGTNEPPLRTATRSVGEIIASAKRDGIEWV FIDTPPNLSAVVEDAIRNATMVIIPARPGVFDVNAVQDTIQTCRANRKPYAIVLNGAPALRGEGESRIVTIARDALAKFK APVWGGQITNRADLLMALGEGQGAREYAAEGRAAYEINRLWAAIERSVKAIRGAGSAGGAMHKQAA
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24025; Mature: 24025
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVIVFASRKGGSGKSTLTAHLAAHVNKASRPCLLIDADPQGSLTLWHKLRGTNEPPLRT CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCHHH ATRSVGEIIASAKRDGIEWVFIDTPPNLSAVVEDAIRNATMVIIPARPGVFDVNAVQDTI HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHH QTCRANRKPYAIVLNGAPALRGEGESRIVTIARDALAKFKAPVWGGQITNRADLLMALGE HHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCHHHEEEEECC GQGAREYAAEGRAAYEINRLWAAIERSVKAIRGAGSAGGAMHKQAA CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNVIVFASRKGGSGKSTLTAHLAAHVNKASRPCLLIDADPQGSLTLWHKLRGTNEPPLRT CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEECCCCCCCCHHH ATRSVGEIIASAKRDGIEWVFIDTPPNLSAVVEDAIRNATMVIIPARPGVFDVNAVQDTI HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHH QTCRANRKPYAIVLNGAPALRGEGESRIVTIARDALAKFKAPVWGGQITNRADLLMALGE HHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCHHHEEEEECC GQGAREYAAEGRAAYEINRLWAAIERSVKAIRGAGSAGGAMHKQAA CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA