| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is ssuA [H]
Identifier: 86748599
GI number: 86748599
Start: 1663203
End: 1664624
Strand: Reverse
Name: ssuA [H]
Synonym: RPB_1474
Alternate gene names: 86748599
Gene position: 1664624-1663203 (Counterclockwise)
Preceding gene: 86748600
Following gene: 86748598
Centisome position: 31.22
GC content: 61.6
Gene sequence:
>1422_bases ATGGTTCGTACTTCTGGACATCGTCTGATTTTCGCCGCCTTCACCGCCGCGATGATGGCGAGCACCCCGGTCGCCGCCCA GACCACCGTCACGGTCGGCATCGGCACCCAGGACACCACCACCAACACCGCGACCACCGGCGTCGTCATTCGGCAGCTGA AGCTGCTGGAGAAGTATCTTCCCAAGGACGGCAAATACGCGAACGTCAAATTCGAGTTCGATTGGCAGAATTTCACCTCC GGCCCACCCGTCACCAACGGCATGATGGCCAACAAGCTGCAATTCGGCGGCATGGGTGACTATCCGCTGGTGGTGAACGG CTTCACCTTCCAGAGCAACCCCGAGAGCAAGAGCCGCCTGATCGCGGTCGCGGCCTACAGCCTCGACGGCTCCGGCAACG GCCTGGTGGTTCACAAGGACTCCCCGTACTATCAGCTGTCCGATCTCAAGGGCAAATTGGTGAGCGTGCCGTTCGGCTCC GCCGCGCACGGCATGATCCTAAAGGCGATGCAGGATCGCGGCTGGCCCGCGGACTATTGGCAACTGGTGAGCCAGAGCCC GGAAGTCGGCTCGACCAATCTCCAGGAGAAGAAGATCGACGCCCACGCCGATTTCGTCCCGTTCGCCGAACTACTGCCGT TCCGCGGTTTCGCCCGCAAGATCTTCGACGGCGTCGAGACCAATCTGCCGACCTGGCACGGCGTGGTGGTGCGTACCGAC TTCGCCGAGAAATATCCCGAAGTCGTGGTCGCCTATGTCAAGGCGATCATCGCGGCCAATGCCTGGCTGCGCGCCGATCC GAAGCTCGCCGCCGAAAAGATCCAGGAATGGACCGGCATCAACAAGGAAGTGGTCTACATCTTCCTGGGACCGGGCGGCA ACATGACCACCGATCCGACGATCAAGCCGCAGCTGATCGAGGCCGCCGCGGTCGACGTCAAGGTGCTGCAGAATCTCGGC CGCATGAAGGAATTCGATCCGAAGAGCTGGGTCGACGACAGCTACATCCGCAAGGCCTATGCCGAACTGAAGCTCGACTA CGACGCCGAGCTGAAGAGCACCAAGAACTACGAAATCAGCGGCGAGGACAAATTCTGCAAGAAGCCGATCACCGAGCCGC GCAAGGCCGGCGAGGTCTGGGTCGACGGCGACGGCATCGAGCCGTTCAGCAGCGCGGCCTGCACGCTCGCCGCTTATGCG GACATCAAGGCCAAGGGCAAGAAGATCAACATGGCCTATGTGTTCGACTCCGCCCGGGGCATCAAGCTGTTCGCCGACCA GGCCTACTACACGGTCGGCGCCGACAAGGCGCAGTTGTCGCCGTTCCTGCTCAAGAAGGACGCCGAAGCGCATGCCGCCA AGATCAACGGCAAGGTGCTGAATTTCGACGAAGCCCTCAAGTCAGCGGTCAGCGGAGGTTGA
Upstream 100 bases:
>100_bases ACTCGACTGCCACGACGTTTGCCGTCTCGGCGAAACCGACGAAGGATGTTGACACCAACTGCCAACGTCCAAGTCGTAAT CGCTCACCGAGAGGTCTTCC
Downstream 100 bases:
>100_bases CGATGGAAAGCTCCGCGGTGCGGCGCGACCAGCAGGGGCCGGACTCGCCGGCCGCTGCCTTCCGTGTGGGCTGGCTCCCG TCGGCCGCCACGGCCCCGAC
Product: ABC transporter substrate-binding protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MVRTSGHRLIFAAFTAAMMASTPVAAQTTVTVGIGTQDTTTNTATTGVVIRQLKLLEKYLPKDGKYANVKFEFDWQNFTS GPPVTNGMMANKLQFGGMGDYPLVVNGFTFQSNPESKSRLIAVAAYSLDGSGNGLVVHKDSPYYQLSDLKGKLVSVPFGS AAHGMILKAMQDRGWPADYWQLVSQSPEVGSTNLQEKKIDAHADFVPFAELLPFRGFARKIFDGVETNLPTWHGVVVRTD FAEKYPEVVVAYVKAIIAANAWLRADPKLAAEKIQEWTGINKEVVYIFLGPGGNMTTDPTIKPQLIEAAAVDVKVLQNLG RMKEFDPKSWVDDSYIRKAYAELKLDYDAELKSTKNYEISGEDKFCKKPITEPRKAGEVWVDGDGIEPFSSAACTLAAYA DIKAKGKKINMAYVFDSARGIKLFADQAYYTVGADKAQLSPFLLKKDAEAHAAKINGKVLNFDEALKSAVSGG
Sequences:
>Translated_473_residues MVRTSGHRLIFAAFTAAMMASTPVAAQTTVTVGIGTQDTTTNTATTGVVIRQLKLLEKYLPKDGKYANVKFEFDWQNFTS GPPVTNGMMANKLQFGGMGDYPLVVNGFTFQSNPESKSRLIAVAAYSLDGSGNGLVVHKDSPYYQLSDLKGKLVSVPFGS AAHGMILKAMQDRGWPADYWQLVSQSPEVGSTNLQEKKIDAHADFVPFAELLPFRGFARKIFDGVETNLPTWHGVVVRTD FAEKYPEVVVAYVKAIIAANAWLRADPKLAAEKIQEWTGINKEVVYIFLGPGGNMTTDPTIKPQLIEAAAVDVKVLQNLG RMKEFDPKSWVDDSYIRKAYAELKLDYDAELKSTKNYEISGEDKFCKKPITEPRKAGEVWVDGDGIEPFSSAACTLAAYA DIKAKGKKINMAYVFDSARGIKLFADQAYYTVGADKAQLSPFLLKKDAEAHAAKINGKVLNFDEALKSAVSGG >Mature_473_residues MVRTSGHRLIFAAFTAAMMASTPVAAQTTVTVGIGTQDTTTNTATTGVVIRQLKLLEKYLPKDGKYANVKFEFDWQNFTS GPPVTNGMMANKLQFGGMGDYPLVVNGFTFQSNPESKSRLIAVAAYSLDGSGNGLVVHKDSPYYQLSDLKGKLVSVPFGS AAHGMILKAMQDRGWPADYWQLVSQSPEVGSTNLQEKKIDAHADFVPFAELLPFRGFARKIFDGVETNLPTWHGVVVRTD FAEKYPEVVVAYVKAIIAANAWLRADPKLAAEKIQEWTGINKEVVYIFLGPGGNMTTDPTIKPQLIEAAAVDVKVLQNLG RMKEFDPKSWVDDSYIRKAYAELKLDYDAELKSTKNYEISGEDKFCKKPITEPRKAGEVWVDGDGIEPFSSAACTLAAYA DIKAKGKKINMAYVFDSARGIKLFADQAYYTVGADKAQLSPFLLKKDAEAHAAKINGKVLNFDEALKSAVSGG
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=203, Percent_Identity=29.5566502463054, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 51722; Mature: 51722
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRTSGHRLIFAAFTAAMMASTPVAAQTTVTVGIGTQDTTTNTATTGVVIRQLKLLEKYL CCCCCCCEEEHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHC PKDGKYANVKFEFDWQNFTSGPPVTNGMMANKLQFGGMGDYPLVVNGFTFQSNPESKSRL CCCCCEEEEEEEECCCCCCCCCCCCCCCHHCCEECCCCCCCCEEEEEEEECCCCCCCCEE IAVAAYSLDGSGNGLVVHKDSPYYQLSDLKGKLVSVPFGSAAHGMILKAMQDRGWPADYW EEEEEEEECCCCCEEEEECCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHH QLVSQSPEVGSTNLQEKKIDAHADFVPFAELLPFRGFARKIFDGVETNLPTWHGVVVRTD HHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEC FAEKYPEVVVAYVKAIIAANAWLRADPKLAAEKIQEWTGINKEVVYIFLGPGGNMTTDPT HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC IKPQLIEAAAVDVKVLQNLGRMKEFDPKSWVDDSYIRKAYAELKLDYDAELKSTKNYEIS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEC GEDKFCKKPITEPRKAGEVWVDGDGIEPFSSAACTLAAYADIKAKGKKINMAYVFDSARG CCCHHHHCCCCCCHHCCEEEECCCCCCCHHHHHEEEEEEHHHHCCCCEEEEEEEEECCCC IKLFADQAYYTVGADKAQLSPFLLKKDAEAHAAKINGKVLNFDEALKSAVSGG EEEEECCEEEEECCCHHHCCHHHEECCCCHHHEECCCEEECHHHHHHHHHCCC >Mature Secondary Structure MVRTSGHRLIFAAFTAAMMASTPVAAQTTVTVGIGTQDTTTNTATTGVVIRQLKLLEKYL CCCCCCCEEEHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHC PKDGKYANVKFEFDWQNFTSGPPVTNGMMANKLQFGGMGDYPLVVNGFTFQSNPESKSRL CCCCCEEEEEEEECCCCCCCCCCCCCCCHHCCEECCCCCCCCEEEEEEEECCCCCCCCEE IAVAAYSLDGSGNGLVVHKDSPYYQLSDLKGKLVSVPFGSAAHGMILKAMQDRGWPADYW EEEEEEEECCCCCEEEEECCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHH QLVSQSPEVGSTNLQEKKIDAHADFVPFAELLPFRGFARKIFDGVETNLPTWHGVVVRTD HHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEC FAEKYPEVVVAYVKAIIAANAWLRADPKLAAEKIQEWTGINKEVVYIFLGPGGNMTTDPT HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC IKPQLIEAAAVDVKVLQNLGRMKEFDPKSWVDDSYIRKAYAELKLDYDAELKSTKNYEIS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEC GEDKFCKKPITEPRKAGEVWVDGDGIEPFSSAACTLAAYADIKAKGKKINMAYVFDSARG CCCHHHHCCCCCCHHCCEEEECCCCCCCHHHHHEEEEEEHHHHCCCCEEEEEEEEECCCC IKLFADQAYYTVGADKAQLSPFLLKKDAEAHAAKINGKVLNFDEALKSAVSGG EEEEECCEEEEECCCHHHCCHHHEECCCCHHHEECCCEEECHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]