Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86748591

Identifier: 86748591

GI number: 86748591

Start: 1654833

End: 1655111

Strand: Reverse

Name: 86748591

Synonym: RPB_1466

Alternate gene names: NA

Gene position: 1655111-1654833 (Counterclockwise)

Preceding gene: 86748592

Following gene: 86748590

Centisome position: 31.04

GC content: 61.65

Gene sequence:

>279_bases
GTGAAGCTGCGCTTCACCATTCGCGCTGCTGCCGAACTCGACGAGATTCTGAGCTACATTGACGACCGATCACCGCAGGG
TGCGTTGCACGTCAAGAAGCGCATCCACGCTGTCATCGGCCTGCTCCTTCAACACCCGGGCGCGGGTCGGCCAACCGTGA
GGGGGATGCGCCGAGTGGTGGCGTATCCATATCCCTATTTGATCTTCTATCGGGCGACGGAGCAGGAGATCGTCATCCAC
GGTATCCGCCACAGCGCCCGCAAGCCCGCTCGACAGTGA

Upstream 100 bases:

>100_bases
CGGAAGAAGCCGCTTCGTTCGATGAATCACTGGCACAGGCCGAGCATGGCGAATTCGCCAGCGACGAACAGGTCCGCGCG
ATCTGGGCGAAGCATGGGCT

Downstream 100 bases:

>100_bases
GCAGAGCCGAAGCCGCTCACAGGGGGCAGCGCGCTGGTCCGCCCACGCCCCCTTGCCCTCCGCCGCAATCGCGATCTAGC
TGGCTGCGCGCCCATCATCG

Product: plasmid stabilization system protein

Products: NA

Alternate protein names: Plasmid Stabilization System; Stabilisation Protein; Plasmid Stabilisation System Protein

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKLRFTIRAAAELDEILSYIDDRSPQGALHVKKRIHAVIGLLLQHPGAGRPTVRGMRRVVAYPYPYLIFYRATEQEIVIH
GIRHSARKPARQ

Sequences:

>Translated_92_residues
MKLRFTIRAAAELDEILSYIDDRSPQGALHVKKRIHAVIGLLLQHPGAGRPTVRGMRRVVAYPYPYLIFYRATEQEIVIH
GIRHSARKPARQ
>Mature_92_residues
MKLRFTIRAAAELDEILSYIDDRSPQGALHVKKRIHAVIGLLLQHPGAGRPTVRGMRRVVAYPYPYLIFYRATEQEIVIH
GIRHSARKPARQ

Specific function: Unknown

COG id: COG3668

COG function: function code R; Plasmid stabilization system protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10557; Mature: 10557

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRFTIRAAAELDEILSYIDDRSPQGALHVKKRIHAVIGLLLQHPGAGRPTVRGMRRVV
CCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
AYPYPYLIFYRATEQEIVIHGIRHSARKPARQ
CCCCCEEEEEECCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLRFTIRAAAELDEILSYIDDRSPQGALHVKKRIHAVIGLLLQHPGAGRPTVRGMRRVV
CCEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
AYPYPYLIFYRATEQEIVIHGIRHSARKPARQ
CCCCCEEEEEECCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA