| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is mhpC2 [H]
Identifier: 86748545
GI number: 86748545
Start: 1608246
End: 1609208
Strand: Direct
Name: mhpC2 [H]
Synonym: RPB_1420
Alternate gene names: 86748545
Gene position: 1608246-1609208 (Clockwise)
Preceding gene: 86748544
Following gene: 86748546
Centisome position: 30.16
GC content: 68.74
Gene sequence:
>963_bases ATGATCGCAATCGGCGCTGTCGCCATGCTCGCCGCGCTGGCGCTGCTCACGCAGGCCGGCGTGCTGTGGCTGCAGGGCAA ATTTCCGCCGCAGGGCGAGCGGATTGCCGTCAGCGGCGGCAAGCTGCACGTCGTCGATCTCGGCCCCCGCAACCTCGCCA CGTTGCCGATCGTGATGATCCACGGCGCCAGCTCCAATCTCGGCGCGATGCGCGTGCCGCTCGGCGATGCGCTCGCGCTG CGGCACCGCGTTCTGCTGATCGATCGGCCCGGCCATGGCTGGAGCAGCCGCGAAGACCTCGCCAATTCCTCGCCCGCGAT GCAGGCGGAAGCGATCGGCGAGGCGCTCGACGCCCTCGGCGTGTCGCGCGCGATTGTCGTCGTGCATTCGATGGCGGGCG CACTCGGCGCGCGGCTGGCGCTGGATCAGCCGCAACGTGTTGCGGGGCTGGTCATGCTGGCGCCGGTGACGCATCCGTGG CGCGGCGGCGTCGGGACCTACAACAGGGTGATGACCACGCCGGTGCTCGGTCCGCTATTGGCCCACACCATCACGCTACC GCTCGGATCGCTACTCACCGAGCCCGGGGCGCGTTCGGCATTCACACCGCAGACCATGCCGGAGGACTACGTCGACGCCA GCGCGACTCCGCTGCTGCTGCGACCGCGCGCATTCCTTGCCAATAGCTGGGACTTGACCACGCTGAAGGAGGCCGTGGCC GAGCAGGCCCCGCGCTACCCGCAGATCACTGCGCCGACCGTGCTGATCCATGGCGACGCCGACGAGATCGTCTCTGTCGA CATCCATTCGCGCGCCTTCGCCGCCGCGGTTCCGCAGGCGAAGCTGATCGTGCTGCCGGACGTCGGGCACATGGTGCAGA ATACCGCCCCCGATCTGGTCCAGCGCGAAGTCGAGGCGCTGATTGCAACGGCCGTCACGAAATCGCACGCAGCGATGCAC TAG
Upstream 100 bases:
>100_bases ACGGAAAAGGTCGAGGGCCGCGATATCTGAGCGGGACGACGAAACATTCGCGCGCGCACCGCGTAACTCACCCGTGCGAA AAATCTCCCGGGTCCCGTCC
Downstream 100 bases:
>100_bases ACTTTCATCCCCGACTACTCACCAAAAGCAGGAGCTGCACATGAGCACGACATTCGGTTCGGCCAAATGGCAGGGCGGCA TCAAGGACGGCAAGGGCGCG
Product: alpha/beta hydrolase fold
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase 2; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase 2; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase 2 [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MIAIGAVAMLAALALLTQAGVLWLQGKFPPQGERIAVSGGKLHVVDLGPRNLATLPIVMIHGASSNLGAMRVPLGDALAL RHRVLLIDRPGHGWSSREDLANSSPAMQAEAIGEALDALGVSRAIVVVHSMAGALGARLALDQPQRVAGLVMLAPVTHPW RGGVGTYNRVMTTPVLGPLLAHTITLPLGSLLTEPGARSAFTPQTMPEDYVDASATPLLLRPRAFLANSWDLTTLKEAVA EQAPRYPQITAPTVLIHGDADEIVSVDIHSRAFAAAVPQAKLIVLPDVGHMVQNTAPDLVQREVEALIATAVTKSHAAMH
Sequences:
>Translated_320_residues MIAIGAVAMLAALALLTQAGVLWLQGKFPPQGERIAVSGGKLHVVDLGPRNLATLPIVMIHGASSNLGAMRVPLGDALAL RHRVLLIDRPGHGWSSREDLANSSPAMQAEAIGEALDALGVSRAIVVVHSMAGALGARLALDQPQRVAGLVMLAPVTHPW RGGVGTYNRVMTTPVLGPLLAHTITLPLGSLLTEPGARSAFTPQTMPEDYVDASATPLLLRPRAFLANSWDLTTLKEAVA EQAPRYPQITAPTVLIHGDADEIVSVDIHSRAFAAAVPQAKLIVLPDVGHMVQNTAPDLVQREVEALIATAVTKSHAAMH >Mature_320_residues MIAIGAVAMLAALALLTQAGVLWLQGKFPPQGERIAVSGGKLHVVDLGPRNLATLPIVMIHGASSNLGAMRVPLGDALAL RHRVLLIDRPGHGWSSREDLANSSPAMQAEAIGEALDALGVSRAIVVVHSMAGALGARLALDQPQRVAGLVMLAPVTHPW RGGVGTYNRVMTTPVLGPLLAHTITLPLGSLLTEPGARSAFTPQTMPEDYVDASATPLLLRPRAFLANSWDLTTLKEAVA EQAPRYPQITAPTVLIHGDADEIVSVDIHSRAFAAAVPQAKLIVLPDVGHMVQNTAPDLVQREVEALIATAVTKSHAAMH
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. MhpC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 33615; Mature: 33615
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAIGAVAMLAALALLTQAGVLWLQGKFPPQGERIAVSGGKLHVVDLGPRNLATLPIVMI CEEHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCEEEEEECCCCCCCEEEEEEE HGASSNLGAMRVPLGDALALRHRVLLIDRPGHGWSSREDLANSSPAMQAEAIGEALDALG ECCCCCCCEEECCCCHHHHHCEEEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH VSRAIVVVHSMAGALGARLALDQPQRVAGLVMLAPVTHPWRGGVGTYNRVMTTPVLGPLL HHHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH AHTITLPLGSLLTEPGARSAFTPQTMPEDYVDASATPLLLRPRAFLANSWDLTTLKEAVA HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCEEECCHHHHCCCCCHHHHHHHHH EQAPRYPQITAPTVLIHGDADEIVSVDIHSRAFAAAVPQAKLIVLPDVGHMVQNTAPDLV HHCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHCCCCEEEEECCCHHHHHCCCHHHH QREVEALIATAVTKSHAAMH HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIAIGAVAMLAALALLTQAGVLWLQGKFPPQGERIAVSGGKLHVVDLGPRNLATLPIVMI CEEHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEECCEEEEEECCCCCCCEEEEEEE HGASSNLGAMRVPLGDALALRHRVLLIDRPGHGWSSREDLANSSPAMQAEAIGEALDALG ECCCCCCCEEECCCCHHHHHCEEEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH VSRAIVVVHSMAGALGARLALDQPQRVAGLVMLAPVTHPWRGGVGTYNRVMTTPVLGPLL HHHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH AHTITLPLGSLLTEPGARSAFTPQTMPEDYVDASATPLLLRPRAFLANSWDLTTLKEAVA HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCEEECCHHHHCCCCCHHHHHHHHH EQAPRYPQITAPTVLIHGDADEIVSVDIHSRAFAAAVPQAKLIVLPDVGHMVQNTAPDLV HHCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHCCCCEEEEECCCHHHHHCCCHHHH QREVEALIATAVTKSHAAMH HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA