| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748504
Identifier: 86748504
GI number: 86748504
Start: 1571575
End: 1571901
Strand: Reverse
Name: 86748504
Synonym: RPB_1379
Alternate gene names: NA
Gene position: 1571901-1571575 (Counterclockwise)
Preceding gene: 86748506
Following gene: 86748501
Centisome position: 29.48
GC content: 66.67
Gene sequence:
>327_bases GTGCATCCGGCAAGAAGCTTCCAGTTTAAACGGCTTGCGCAAGAATTCAGCGCGTGGCGCGCCGTCCCTGACAACCAACG CGCACCTGCGGCCGCCTGGTGGTGGGGGACGGCGATCGAGTTGCGCTCCGAAACCGAGCCGATGCCGGCGGAGCTTCGTT CGGCATTCGGCCTGCCGCTAGGGGCGTCCTACGCCGAAGCCGCGACGCGCCTGATGGCTCGAATCGCCGAGCAGAAGTCG CTTGCCCCCTCCAACGAGTTCCCGCGCAACCGGAAATCACCCGCGGCAGCGACCGAGGGAGCCGCTCAGGCCGACATCAT TCGGTAG
Upstream 100 bases:
>100_bases TCGGTATCCATGCTGTCGGGCGCAGCCGGATTCTCTTCCCGGCCGCGCAACTTCCTCCCCGCTCGACTGTTACTGACCTG AATACCAGACAGGGCAGGTC
Downstream 100 bases:
>100_bases CTCCAGACGATGTTCACGGGGGGCGTCCGTCTACAGCGCCACCTCATCCTGCCCCTCGACGTCGGCGATCTCGAGATTGA GATTGTCCCCGGTCCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MHPARSFQFKRLAQEFSAWRAVPDNQRAPAAAWWWGTAIELRSETEPMPAELRSAFGLPLGASYAEAATRLMARIAEQKS LAPSNEFPRNRKSPAAATEGAAQADIIR
Sequences:
>Translated_108_residues MHPARSFQFKRLAQEFSAWRAVPDNQRAPAAAWWWGTAIELRSETEPMPAELRSAFGLPLGASYAEAATRLMARIAEQKS LAPSNEFPRNRKSPAAATEGAAQADIIR >Mature_108_residues MHPARSFQFKRLAQEFSAWRAVPDNQRAPAAAWWWGTAIELRSETEPMPAELRSAFGLPLGASYAEAATRLMARIAEQKS LAPSNEFPRNRKSPAAATEGAAQADIIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11924; Mature: 11924
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPARSFQFKRLAQEFSAWRAVPDNQRAPAAAWWWGTAIELRSETEPMPAELRSAFGLPL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHEECCCCCCCCHHHHHHHCCCC GASYAEAATRLMARIAEQKSLAPSNEFPRNRKSPAAATEGAAQADIIR CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHPARSFQFKRLAQEFSAWRAVPDNQRAPAAAWWWGTAIELRSETEPMPAELRSAFGLPL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHEECCCCCCCCHHHHHHHCCCC GASYAEAATRLMARIAEQKSLAPSNEFPRNRKSPAAATEGAAQADIIR CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA