Click here to switch to the map view.

The map label for this gene is 86748501

Identifier: 86748501

GI number: 86748501

Start: 1569057

End: 1569371

Strand: Reverse

Name: 86748501

Synonym: RPB_1376

Alternate gene names: NA

Gene position: 1569371-1569057 (Counterclockwise)

Preceding gene: 86748504

Following gene: 86748497

Centisome position: 29.43

GC content: 58.41

Gene sequence:

>315_bases
ATGCGGTTGATTGCTGTTTGTCTTACGATTCTGCTTCCGATGATCACGACGGCTTCAGCCGCCACCAAGGCTGAGCGCCG
CGGACTGGCTTTTGCCGAGTCCAATTGTGCACGCTGCCATGCGATCGGCCGCACCGGCGACAGCCGATTGAAGCAAGCCC
CGCCATTCCGCTCGCTGCATGTCCGCTATCCGATCGAGAGTCTGGCGGAGGCATTCGCCGAAGGGATCTACACCGGACAT
TCCGATATGCCGGCGTTCGAGCTCGACCCTGATCAGATCAACGACCTTTTGGCATATCTGAAGAGCCTGGAATAG

Upstream 100 bases:

>100_bases
CGCCAAATCGTCAAGTTGGCTTGACACAGATCAAGGTTGTTCCGTCCTGCGCAATCAATGGTCGCATGCGCGGTTGCGCC
TTCTCCAGACTGAGCGCCCG

Downstream 100 bases:

>100_bases
CGGGCTTGACCTCGACAGCACTGCCGCTCGACAGGCTGTCCACAGTCCATGGAATGAGCTCTTTGGCTGCCGCACCGAAC
GCCGTCTCGAAAGCCGTGAC

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome C Family Protein; Cytochrome C; Cytochrome C-Family Protein

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MRLIAVCLTILLPMITTASAATKAERRGLAFAESNCARCHAIGRTGDSRLKQAPPFRSLHVRYPIESLAEAFAEGIYTGH
SDMPAFELDPDQINDLLAYLKSLE

Sequences:

>Translated_104_residues
MRLIAVCLTILLPMITTASAATKAERRGLAFAESNCARCHAIGRTGDSRLKQAPPFRSLHVRYPIESLAEAFAEGIYTGH
SDMPAFELDPDQINDLLAYLKSLE
>Mature_104_residues
MRLIAVCLTILLPMITTASAATKAERRGLAFAESNCARCHAIGRTGDSRLKQAPPFRSLHVRYPIESLAEAFAEGIYTGH
SDMPAFELDPDQINDLLAYLKSLE

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11420; Mature: 11420

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIAVCLTILLPMITTASAATKAERRGLAFAESNCARCHAIGRTGDSRLKQAPPFRSLH
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCCEE
VRYPIESLAEAFAEGIYTGHSDMPAFELDPDQINDLLAYLKSLE
EECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLIAVCLTILLPMITTASAATKAERRGLAFAESNCARCHAIGRTGDSRLKQAPPFRSLH
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCCEE
VRYPIESLAEAFAEGIYTGHSDMPAFELDPDQINDLLAYLKSLE
EECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA