| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86748492
Identifier: 86748492
GI number: 86748492
Start: 1557431
End: 1558261
Strand: Direct
Name: 86748492
Synonym: RPB_1367
Alternate gene names: NA
Gene position: 1557431-1558261 (Clockwise)
Preceding gene: 86748484
Following gene: 86748493
Centisome position: 29.21
GC content: 67.87
Gene sequence:
>831_bases ATGACGTATTCGACACTCATGGTCGCTCTGTCGTGCGATCGGCCGAATGCGTGTCCGCTCGGGATCGCCGCCGAATTGGC GGAGCGGTTCGAAGCCCGGCTGATCGGTATTGCGGCATCCGACCTCTCCCCTCCATTGTACTATACTGCGGGGGGGAGCG CGGAGCGGCTGTTGGAGCAAGGGCTGGCCGATATCCGGCAACGGCTCGGCGAGTTGGAGGCCGAATTCCGCAAGGCGATG CATGGGCGCGCTCGCGAGCTGCTGTGGCGCTCGGCGACCCAGCCGCCGGCCAAGTACATCGTGCAGCAGGCGCGCGCTGC CGACATCGTGGTGATCGGTGCGGCGACCGGAAGCCCCCTCACGGATCCGTTCGCGGTCGCGGATCCGGGCGATTTGGTGA TGCAGATCGGGCGGCCGTTGCTGGTTGTGCCGGCCGACGTCTGCCGGATCGATTTTTCGAGCGTGGTGGTGGCCTGGAAG GACAATCCGGAGGCACGGCGCGCCATCGTCGACGCGCTGCCGCTGCTGCGTCAGGCGAGTCACGTCGCCGTGGTCGAGAT CGTCGAGGAGGATGGTGATCGCGCCGAAGCGCTGGCGGGAGTGCACGATGTGGTCGACTGGTTGTCGCGGCACCATATCC ACGCCATCGGCGAGGTGCCGGTGGCGGCCGGCGACGTCGCCCAGCAGATCGACGCGATCGCGGCGCGCAACGGCGCCGGC ATCGTGATCGCCGGCGCTTACGGCCATTCGCGCTTCCGTGAATGGGTCCTCGGCGGCGTCACGCAGTATCTGCTCGAGCA GACCAGCCGCTGCGCCTTCCTCGCGCGCTGA
Upstream 100 bases:
>100_bases TGCCGCGCGACCTCTGCGGCAGAAACAGGGCTAGGTTGCAGAAATGAAAAGTGCCTGGATCACCCGATTAGTTCAGGGTG GCGGGAATCGGGAGGCATCG
Downstream 100 bases:
>100_bases AAGTCCACTGGCGGGGTCTCGGCAGCAGCTCGTGAAAGTCCGCCTTGATCGCCGTCAACGGCCCGCCGTCGTCGGATGCG ATGTTTGTCGCCTGGACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Universal Stress Protein UspA; UspA Domain Protein; Universal Stress Protein; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; UspA-Like Protein; Universal Stress Protein UspA Family; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTYSTLMVALSCDRPNACPLGIAAELAERFEARLIGIAASDLSPPLYYTAGGSAERLLEQGLADIRQRLGELEAEFRKAM HGRARELLWRSATQPPAKYIVQQARAADIVVIGAATGSPLTDPFAVADPGDLVMQIGRPLLVVPADVCRIDFSSVVVAWK DNPEARRAIVDALPLLRQASHVAVVEIVEEDGDRAEALAGVHDVVDWLSRHHIHAIGEVPVAAGDVAQQIDAIAARNGAG IVIAGAYGHSRFREWVLGGVTQYLLEQTSRCAFLAR
Sequences:
>Translated_276_residues MTYSTLMVALSCDRPNACPLGIAAELAERFEARLIGIAASDLSPPLYYTAGGSAERLLEQGLADIRQRLGELEAEFRKAM HGRARELLWRSATQPPAKYIVQQARAADIVVIGAATGSPLTDPFAVADPGDLVMQIGRPLLVVPADVCRIDFSSVVVAWK DNPEARRAIVDALPLLRQASHVAVVEIVEEDGDRAEALAGVHDVVDWLSRHHIHAIGEVPVAAGDVAQQIDAIAARNGAG IVIAGAYGHSRFREWVLGGVTQYLLEQTSRCAFLAR >Mature_275_residues TYSTLMVALSCDRPNACPLGIAAELAERFEARLIGIAASDLSPPLYYTAGGSAERLLEQGLADIRQRLGELEAEFRKAMH GRARELLWRSATQPPAKYIVQQARAADIVVIGAATGSPLTDPFAVADPGDLVMQIGRPLLVVPADVCRIDFSSVVVAWKD NPEARRAIVDALPLLRQASHVAVVEIVEEDGDRAEALAGVHDVVDWLSRHHIHAIGEVPVAAGDVAQQIDAIAARNGAGI VIAGAYGHSRFREWVLGGVTQYLLEQTSRCAFLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29656; Mature: 29525
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYSTLMVALSCDRPNACPLGIAAELAERFEARLIGIAASDLSPPLYYTAGGSAERLLEQ CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCHHHHHHH GLADIRQRLGELEAEFRKAMHGRARELLWRSATQPPAKYIVQQARAADIVVIGAATGSPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCC TDPFAVADPGDLVMQIGRPLLVVPADVCRIDFSSVVVAWKDNPEARRAIVDALPLLRQAS CCCCCCCCCHHHHHHCCCCEEEECHHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHCC HVAVVEIVEEDGDRAEALAGVHDVVDWLSRHHIHAIGEVPVAAGDVAQQIDAIAARNGAG CHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCC IVIAGAYGHSRFREWVLGGVTQYLLEQTSRCAFLAR EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TYSTLMVALSCDRPNACPLGIAAELAERFEARLIGIAASDLSPPLYYTAGGSAERLLEQ CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCHHHHHHH GLADIRQRLGELEAEFRKAMHGRARELLWRSATQPPAKYIVQQARAADIVVIGAATGSPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCCC TDPFAVADPGDLVMQIGRPLLVVPADVCRIDFSSVVVAWKDNPEARRAIVDALPLLRQAS CCCCCCCCCHHHHHHCCCCEEEECHHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHCC HVAVVEIVEEDGDRAEALAGVHDVVDWLSRHHIHAIGEVPVAAGDVAQQIDAIAARNGAG CHHEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHCCCCC IVIAGAYGHSRFREWVLGGVTQYLLEQTSRCAFLAR EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA