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The map label for this gene is yadS [H]

Identifier: 86748428

GI number: 86748428

Start: 1485303

End: 1485932

Strand: Reverse

Name: yadS [H]

Synonym: RPB_1303

Alternate gene names: 86748428

Gene position: 1485932-1485303 (Counterclockwise)

Preceding gene: 86748429

Following gene: 86748421

Centisome position: 27.87

GC content: 70.63

Gene sequence:

>630_bases
ATGTTCGAGACCGTCACCACGATACTCGACTGGATCGGCGTCGTCGCGTTCACCGTCTCGGGCGCGTTGGTGGCGTCGCG
CAAGCAGATGGACATCGTCGGCTTCGCGCTGCTGGGCACGGCGACCGGCATCGGCGGCGGCACGCTGCGCGACGTCCTGC
TCGGTCTGCCGGTGTTCTGGGTGCACGAGCCGGCCTATCTCGCGACCTGCGTCGCGGTCTCCGCCGTGGTGTTCTTCACC
GCGCATATTCCGCATTCCCGCTACAAGGCGCTGTTGTGGCTGGATGCGATCGGGCTCGCGCTGTTCGCCGTCACCGGCGC
GGAGACGGCGGCGCTGGCGGGCGCCAACGGAATCGTGGCCGTCGCCATGGGCGTGGTCACCGCGACCTTCGGCGGCATCA
TCCGCGATCTGCTCGGCGGCGAGATCCCGGTGATCCTGCGGCGCGAGATCTACGTCACGGCGGCGCTGGTCGGCGCGGCG
GCCTTCGTTCTCCTGACGATGGTCGGCGCCCCGCGCGAAATCAGCACGGGCATCGGCTTTGCGCTCGGCTTGGCCGTGCG
CGCCGCAGCGCTGCAGCGCGGCTGGTCGCTGCCGCGCTACCGGCCGCGACCGGGGCGCGGAGACAACTGA

Upstream 100 bases:

>100_bases
TGTTCAAGACGCAGGACATGGCCGAAGGCATCAAGGCCTTCATGGAAAAACGCGAGCCGAAATTCGTCGGTCGCTGATAC
GCGGCAGCGGAGGCGCCACC

Downstream 100 bases:

>100_bases
TCGCGCCACGCGACCTTTGCGGCGGCGAACTACTTCGCCGCCAGATCCGCTTCGACCAAAGCGCGCAGTTCGGCGGTGAC
GTGCGGCCGCGCGCCGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MFETVTTILDWIGVVAFTVSGALVASRKQMDIVGFALLGTATGIGGGTLRDVLLGLPVFWVHEPAYLATCVAVSAVVFFT
AHIPHSRYKALLWLDAIGLALFAVTGAETAALAGANGIVAVAMGVVTATFGGIIRDLLGGEIPVILRREIYVTAALVGAA
AFVLLTMVGAPREISTGIGFALGLAVRAAALQRGWSLPRYRPRPGRGDN

Sequences:

>Translated_209_residues
MFETVTTILDWIGVVAFTVSGALVASRKQMDIVGFALLGTATGIGGGTLRDVLLGLPVFWVHEPAYLATCVAVSAVVFFT
AHIPHSRYKALLWLDAIGLALFAVTGAETAALAGANGIVAVAMGVVTATFGGIIRDLLGGEIPVILRREIYVTAALVGAA
AFVLLTMVGAPREISTGIGFALGLAVRAAALQRGWSLPRYRPRPGRGDN
>Mature_209_residues
MFETVTTILDWIGVVAFTVSGALVASRKQMDIVGFALLGTATGIGGGTLRDVLLGLPVFWVHEPAYLATCVAVSAVVFFT
AHIPHSRYKALLWLDAIGLALFAVTGAETAALAGANGIVAVAMGVVTATFGGIIRDLLGGEIPVILRREIYVTAALVGAA
AFVLLTMVGAPREISTGIGFALGLAVRAAALQRGWSLPRYRPRPGRGDN

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=198, Percent_Identity=39.8989898989899, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI87082304, Length=171, Percent_Identity=36.2573099415205, Blast_Score=104, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21702; Mature: 21702

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFETVTTILDWIGVVAFTVSGALVASRKQMDIVGFALLGTATGIGGGTLRDVLLGLPVFW
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHE
VHEPAYLATCVAVSAVVFFTAHIPHSRYKALLWLDAIGLALFAVTGAETAALAGANGIVA
EECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHH
VAMGVVTATFGGIIRDLLGGEIPVILRREIYVTAALVGAAAFVLLTMVGAPREISTGIGF
HHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ALGLAVRAAALQRGWSLPRYRPRPGRGDN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFETVTTILDWIGVVAFTVSGALVASRKQMDIVGFALLGTATGIGGGTLRDVLLGLPVFW
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHE
VHEPAYLATCVAVSAVVFFTAHIPHSRYKALLWLDAIGLALFAVTGAETAALAGANGIVA
EECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHH
VAMGVVTATFGGIIRDLLGGEIPVILRREIYVTAALVGAAAFVLLTMVGAPREISTGIGF
HHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ALGLAVRAAALQRGWSLPRYRPRPGRGDN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA