| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fliH
Identifier: 86748399
GI number: 86748399
Start: 1461021
End: 1461638
Strand: Direct
Name: fliH
Synonym: RPB_1274
Alternate gene names: NA
Gene position: 1461021-1461638 (Clockwise)
Preceding gene: 86748398
Following gene: 86748400
Centisome position: 27.4
GC content: 68.77
Gene sequence:
>618_bases ATGGCCGCTCCCGCGCAGAAATTCCTGTTCGACAACGATTTCGGGGCGCCCGACAAGGCCCGCGAAAAGGCCGCGGCCGC CGACGAGCTGGCGCGCGAGGTCGCCGCCGCCGAACAGCGCGGCTATCAGACAGGATTCGCCCAGGCCCAGCGCGAGATCC AGGCCGAAGCCGAACGCCGCAGCGCCGCGGCGCTGGAGCAGATCGCCCAGGCGATCCGAAGCATCGCCGACGGCATCGGC GCCGTCGAAACGCGGATGGAAACCGAGGCGGTCGAAGTCGCGGTGGCGGTCGCGCGCAAACTCTGTGGCGAACTGGTCGC CGCCGAGCCGCTGGCGGAAATCACGTCGCTGGTCGGCGAATGCTTCCATCAACTGGTCTCGACGCCGCATCTGGCGGTGC GCATCAGCGACTCGCTCTACGAGGCCGCGCGCGAGCGCATCGAGCTGCTCGCCAAGCAGAGCGGCTTCGCAGGACGGCTG GTGCTGTTGTCGGATCCGGAGATCGCCGGCGGCGACTGCAGAATTGAATGGGCCGACGGCGGCGTGGTGCTGGACCGCGC CGCGATCGAAGCCAAGATCGGTGAATTGGTCGGGCGCTACATGGCGTCGCGCCGCTAA
Upstream 100 bases:
>100_bases ACGAGGCCCAGGCGCTGCTCGTGAATCTCGCCAAGGACCTCGCCGCCAAGGGCGAGATCGTCCTCACCAAGAACCGCGCC GACGACGAACTGGTGTATTG
Downstream 100 bases:
>100_bases CGAGTTCGAGGACTGAACATGGGCGACAATGACGGCCAGGTGCCGCTTCCCGATCTGAACGGCGCCGACGCGCCGCCGCT GGCGGATGTCGGTTACCACG
Product: flagellar assembly protein H
Products: NA
Alternate protein names: Flagellar Export Protein
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MAAPAQKFLFDNDFGAPDKAREKAAAADELAREVAAAEQRGYQTGFAQAQREIQAEAERRSAAALEQIAQAIRSIADGIG AVETRMETEAVEVAVAVARKLCGELVAAEPLAEITSLVGECFHQLVSTPHLAVRISDSLYEAARERIELLAKQSGFAGRL VLLSDPEIAGGDCRIEWADGGVVLDRAAIEAKIGELVGRYMASRR
Sequences:
>Translated_205_residues MAAPAQKFLFDNDFGAPDKAREKAAAADELAREVAAAEQRGYQTGFAQAQREIQAEAERRSAAALEQIAQAIRSIADGIG AVETRMETEAVEVAVAVARKLCGELVAAEPLAEITSLVGECFHQLVSTPHLAVRISDSLYEAARERIELLAKQSGFAGRL VLLSDPEIAGGDCRIEWADGGVVLDRAAIEAKIGELVGRYMASRR >Mature_204_residues AAPAQKFLFDNDFGAPDKAREKAAAADELAREVAAAEQRGYQTGFAQAQREIQAEAERRSAAALEQIAQAIRSIADGIGA VETRMETEAVEVAVAVARKLCGELVAAEPLAEITSLVGECFHQLVSTPHLAVRISDSLYEAARERIELLAKQSGFAGRLV LLSDPEIAGGDCRIEWADGGVVLDRAAIEAKIGELVGRYMASRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21936; Mature: 21805
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPAQKFLFDNDFGAPDKAREKAAAADELAREVAAAEQRGYQTGFAQAQREIQAEAERR CCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SAAALEQIAQAIRSIADGIGAVETRMETEAVEVAVAVARKLCGELVAAEPLAEITSLVGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CFHQLVSTPHLAVRISDSLYEAARERIELLAKQSGFAGRLVLLSDPEIAGGDCRIEWADG HHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCC GVVLDRAAIEAKIGELVGRYMASRR CEEEHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AAPAQKFLFDNDFGAPDKAREKAAAADELAREVAAAEQRGYQTGFAQAQREIQAEAERR CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SAAALEQIAQAIRSIADGIGAVETRMETEAVEVAVAVARKLCGELVAAEPLAEITSLVGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CFHQLVSTPHLAVRISDSLYEAARERIELLAKQSGFAGRLVLLSDPEIAGGDCRIEWADG HHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCC GVVLDRAAIEAKIGELVGRYMASRR CEEEHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA