Click here to switch to the map view.

The map label for this gene is 86748373

Identifier: 86748373

GI number: 86748373

Start: 1426693

End: 1427418

Strand: Direct

Name: 86748373

Synonym: RPB_1248

Alternate gene names: NA

Gene position: 1426693-1427418 (Clockwise)

Preceding gene: 86748372

Following gene: 86748374

Centisome position: 26.76

GC content: 69.01

Gene sequence:

>726_bases
GTGAACGATCGATCCGACCAGGGCAAAGTGATGCCTTTCATTCACGATCTCGGCGATGCGATGCGTCGCAATCCGGTGTC
GACCGCGCTGATCGGCATGGGCGTGCTGTGGCTGTTCACCGGCGGCAAGGCCAAAGAGCGTGCCGCGAGTTTGGCGCACA
GCACCGGGCTCGATCGCGTCCCCGACGCCGCATCGGGCGCGATCGATGCCGGACGCGCGGCGATGCACGACGTCAGGGAT
CGGGTCAGCGAAACGGTCGCCGGGGTCGGGGATCGCGCCGCCAGTGCGATGCATAGCGTCCAGGACAGCGGCGCCGCTGC
GCTCGATCGCGCCAGCGAATTCGGAAGGCAGATTCCGGAAACCGGCGCCGAACTGCTCGGCGCGGCGCGCTCGCGCCTGA
CCGAGCTGTTCAACGAGCAGCCGCTGATGCTCGGCGCGCTCGGGGTGGCGATCGGTGCGGGCATCGCAGCCTCGCTGCCG
CGCACAACCGTCGAGGCCGAGCTGTTCGGCGAAACCAGCGACGAGTTCAAGGCGCAGGCGCGCGGCTTCGTCGAACAGGC
CCAGGAGCGAGTCGGCGCGGCCGCGCGGGATGCGGTCGATGCCGCGACCGAGGAAGCGCGCCGCCAGGGGCTGACGCCCG
AGGGCGTGATGTCGGCTGCAGGCGAGATCGGCGAAAAAGCCAGGCGTGTCGCCGATGCGGCCGAAGAAAATCTGCGTCTG
GAATGA

Upstream 100 bases:

>100_bases
TCGGCATCGGCATCAGCCGGCTGTCGCCCGACTCATTGAAGCCGAACATGACGATCGAGCAATTGCAGCGCGACAAGGTC
GCGGCAAAGGAGATGGTGCA

Downstream 100 bases:

>100_bases
GCATGGCGGACATCGACGACAAGGCCCCGAGCGACCGGCCGGACGATGCGATGAAGAGCGGCACCCGTGAGCCCTGGAAG
AAGCCGAACCAGAGTTCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNDRSDQGKVMPFIHDLGDAMRRNPVSTALIGMGVLWLFTGGKAKERAASLAHSTGLDRVPDAASGAIDAGRAAMHDVRD
RVSETVAGVGDRAASAMHSVQDSGAAALDRASEFGRQIPETGAELLGAARSRLTELFNEQPLMLGALGVAIGAGIAASLP
RTTVEAELFGETSDEFKAQARGFVEQAQERVGAAARDAVDAATEEARRQGLTPEGVMSAAGEIGEKARRVADAAEENLRL
E

Sequences:

>Translated_241_residues
MNDRSDQGKVMPFIHDLGDAMRRNPVSTALIGMGVLWLFTGGKAKERAASLAHSTGLDRVPDAASGAIDAGRAAMHDVRD
RVSETVAGVGDRAASAMHSVQDSGAAALDRASEFGRQIPETGAELLGAARSRLTELFNEQPLMLGALGVAIGAGIAASLP
RTTVEAELFGETSDEFKAQARGFVEQAQERVGAAARDAVDAATEEARRQGLTPEGVMSAAGEIGEKARRVADAAEENLRL
E
>Mature_241_residues
MNDRSDQGKVMPFIHDLGDAMRRNPVSTALIGMGVLWLFTGGKAKERAASLAHSTGLDRVPDAASGAIDAGRAAMHDVRD
RVSETVAGVGDRAASAMHSVQDSGAAALDRASEFGRQIPETGAELLGAARSRLTELFNEQPLMLGALGVAIGAGIAASLP
RTTVEAELFGETSDEFKAQARGFVEQAQERVGAAARDAVDAATEEARRQGLTPEGVMSAAGEIGEKARRVADAAEENLRL
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25165; Mature: 25165

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRSDQGKVMPFIHDLGDAMRRNPVSTALIGMGVLWLFTGGKAKERAASLAHSTGLDRV
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
PDAASGAIDAGRAAMHDVRDRVSETVAGVGDRAASAMHSVQDSGAAALDRASEFGRQIPE
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCHH
TGAELLGAARSRLTELFNEQPLMLGALGVAIGAGIAASLPRTTVEAELFGETSDEFKAQA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH
RGFVEQAQERVGAAARDAVDAATEEARRQGLTPEGVMSAAGEIGEKARRVADAAEENLRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
E
C
>Mature Secondary Structure
MNDRSDQGKVMPFIHDLGDAMRRNPVSTALIGMGVLWLFTGGKAKERAASLAHSTGLDRV
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
PDAASGAIDAGRAAMHDVRDRVSETVAGVGDRAASAMHSVQDSGAAALDRASEFGRQIPE
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCHH
TGAELLGAARSRLTELFNEQPLMLGALGVAIGAGIAASLPRTTVEAELFGETSDEFKAQA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH
RGFVEQAQERVGAAARDAVDAATEEARRQGLTPEGVMSAAGEIGEKARRVADAAEENLRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA