Click here to switch to the map view.

The map label for this gene is 86748371

Identifier: 86748371

GI number: 86748371

Start: 1425715

End: 1426320

Strand: Direct

Name: 86748371

Synonym: RPB_1246

Alternate gene names: NA

Gene position: 1425715-1426320 (Clockwise)

Preceding gene: 86748370

Following gene: 86748372

Centisome position: 26.74

GC content: 67.49

Gene sequence:

>606_bases
ATGGCTGAACAGATCGAGAAGACAGGGAACGGCGCCGGCGGAACGCGGTCGCAGCCGTTGAAGTCGGTGAAGAAGGAAGC
CGAAACGATGGCGGGTCAGGCGGCGAATGCGGGTCGCGACATCAAGGACCGGGTGGTCGGCCTCGCTGAAGAGACGGTCG
ACGCCGCGCGCGCCAAGGCAGACGATCTGGCCGGCGCCGCCCGCGAGTTCGCCTCGGAAGCCGGCGAGACGATCAAGCAA
CGCGCCAACGCGCAACGCGAGGCCGGCGCCGACTACATCGGCGGCATCGCCGACGCGATCCGGCGCGCGTCGCACGAGTT
CGACAACGACGTCCCGATCGCCGGCGTCTACATGCGCAAGGCGGCCAACAAGGTGGAGGAGATCTCCGACACCGTGCAGC
GCGGCGATATCTCGGATCTGGTCAAGGGCGTGCAGGATTTCGCCCGCCGCCAGCCGACCGCGTTTCTCGGCCTCGCGGTG
CTGGCCGGCTTCGGCGCGGTGCGCTTCCTGAAGAGTTCGTCGTCGTCCGCGGAGCCGTCCTATCGCACGGCGTCGCACGA
CGGTGGTGGAGACGACAACCGGGGATATCGCGATGACTCCAAATAA

Upstream 100 bases:

>100_bases
CGATCTCGGCGATCGCGCCCGCAAGGTCGCCGAAGCAGCGGTCTCGACATTCGAGTCGCCGTCGCAGAACAAGCATTGAG
ACACAGGGACGGAGATCATC

Downstream 100 bases:

>100_bases
TCGGTCGATTCCCGAGCTGTTCGGCGATGCGTTCAATCAGTTCGCCAAGCTGATCAGCAACGAGTTCGATCTCGCCCGCG
CCGAGATGGCCGACAAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAEQIEKTGNGAGGTRSQPLKSVKKEAETMAGQAANAGRDIKDRVVGLAEETVDAARAKADDLAGAAREFASEAGETIKQ
RANAQREAGADYIGGIADAIRRASHEFDNDVPIAGVYMRKAANKVEEISDTVQRGDISDLVKGVQDFARRQPTAFLGLAV
LAGFGAVRFLKSSSSSAEPSYRTASHDGGGDDNRGYRDDSK

Sequences:

>Translated_201_residues
MAEQIEKTGNGAGGTRSQPLKSVKKEAETMAGQAANAGRDIKDRVVGLAEETVDAARAKADDLAGAAREFASEAGETIKQ
RANAQREAGADYIGGIADAIRRASHEFDNDVPIAGVYMRKAANKVEEISDTVQRGDISDLVKGVQDFARRQPTAFLGLAV
LAGFGAVRFLKSSSSSAEPSYRTASHDGGGDDNRGYRDDSK
>Mature_200_residues
AEQIEKTGNGAGGTRSQPLKSVKKEAETMAGQAANAGRDIKDRVVGLAEETVDAARAKADDLAGAAREFASEAGETIKQR
ANAQREAGADYIGGIADAIRRASHEFDNDVPIAGVYMRKAANKVEEISDTVQRGDISDLVKGVQDFARRQPTAFLGLAVL
AGFGAVRFLKSSSSSAEPSYRTASHDGGGDDNRGYRDDSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21205; Mature: 21074

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQIEKTGNGAGGTRSQPLKSVKKEAETMAGQAANAGRDIKDRVVGLAEETVDAARAKA
CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DDLAGAAREFASEAGETIKQRANAQREAGADYIGGIADAIRRASHEFDNDVPIAGVYMRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AANKVEEISDTVQRGDISDLVKGVQDFARRQPTAFLGLAVLAGFGAVRFLKSSSSSAEPS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YRTASHDGGGDDNRGYRDDSK
CCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEQIEKTGNGAGGTRSQPLKSVKKEAETMAGQAANAGRDIKDRVVGLAEETVDAARAKA
CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DDLAGAAREFASEAGETIKQRANAQREAGADYIGGIADAIRRASHEFDNDVPIAGVYMRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AANKVEEISDTVQRGDISDLVKGVQDFARRQPTAFLGLAVLAGFGAVRFLKSSSSSAEPS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YRTASHDGGGDDNRGYRDDSK
CCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA