| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is fabI1 [H]
Identifier: 86748336
GI number: 86748336
Start: 1384102
End: 1384920
Strand: Direct
Name: fabI1 [H]
Synonym: RPB_1211
Alternate gene names: 86748336
Gene position: 1384102-1384920 (Clockwise)
Preceding gene: 86748332
Following gene: 86748337
Centisome position: 25.96
GC content: 64.22
Gene sequence:
>819_bases ATGGTGACCGGTTCGGGTCTGATGCAAGGCAAGCGTGGGGTGATTCTGGGCGTGGCCAACAACCGCTCGATCGCCTGGGG CATCGCCAAGGCCTGCCGCGCCCATGGCGCGGAGATCGCGCTGACCTGGCAGGGCGACGCGCTGAAGAAGCGGGTGATGC CGCTGGCGGCCGAACTCGACGGCATTTTGGTCGGGCATTGCGACGTCACCGATCCGGCCACCATCGATGCGGTGTTCGAC GAACTGAAGGCGAAATGGGGCAAGATCGACTTCGTCGTCCATGCCATCGCGTTCTCCGACAAGGACCAGCTCGACGGCCG TTATGTCGAGACCACCGCCGACAACTTCTCCAAGACGATGCTGATCTCGTGCTATTCGCTGACCGCGATCGCGCAGCGCG CCGAGAAGCTGATGCCGGACGGCGGCTCGATCCTGACGCTGACCTATTACGGCGCCGAGAAGTGGATGCCGCATTACAAC GTGATGGGCGTCGCCAAGGCCGCGCTCGAAGCCAGCGTGCGTTACCTCGCGGCCGATCTCGGCGAGAAGAACATCCGCGT CAACGCGATCTCGGCCGGCCCGATCAAGACGCTGGCGGCGTCGGGCATCGGCGACTTCCGCTACATCCTGAAATGGAACG AATACAATTCGCCGATGCGGCGCACGGTGACGATCGAGGAGGTCGGCGACAGCGCGCTGTATTTCCTGTCCGGCCTGTCG CGCGGCGTCACCGGCGAAATCCACCACGTCGATTCCGGCTACCACGTCGTCGGCATGAAGCGCCCCGACGCGCCGGACAT TTCGCTGGCGAAGGACTGA
Upstream 100 bases:
>100_bases GAATGCGCCAAAACGGCTGAATTTGCTGCGAAAATGGGGGCTGTACCCGGCCCGGCCGCTGGTGTAGGTCCAGAGCCCAA TCAAGGCGATAGGATACGAC
Downstream 100 bases:
>100_bases GCGCGGCGACCATCTCCGAGCCATCATCCTGAGGTGCTCGCCCGCAAGGGCGAGCCTCGAAGGATGCGGACACGCGCACA GCCGGTGCCTTGCGGCCCAT
Product: enoyl-(acyl carrier protein) reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase 1 [H]
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MVTGSGLMQGKRGVILGVANNRSIAWGIAKACRAHGAEIALTWQGDALKKRVMPLAAELDGILVGHCDVTDPATIDAVFD ELKAKWGKIDFVVHAIAFSDKDQLDGRYVETTADNFSKTMLISCYSLTAIAQRAEKLMPDGGSILTLTYYGAEKWMPHYN VMGVAKAALEASVRYLAADLGEKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNSPMRRTVTIEEVGDSALYFLSGLS RGVTGEIHHVDSGYHVVGMKRPDAPDISLAKD
Sequences:
>Translated_272_residues MVTGSGLMQGKRGVILGVANNRSIAWGIAKACRAHGAEIALTWQGDALKKRVMPLAAELDGILVGHCDVTDPATIDAVFD ELKAKWGKIDFVVHAIAFSDKDQLDGRYVETTADNFSKTMLISCYSLTAIAQRAEKLMPDGGSILTLTYYGAEKWMPHYN VMGVAKAALEASVRYLAADLGEKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNSPMRRTVTIEEVGDSALYFLSGLS RGVTGEIHHVDSGYHVVGMKRPDAPDISLAKD >Mature_272_residues MVTGSGLMQGKRGVILGVANNRSIAWGIAKACRAHGAEIALTWQGDALKKRVMPLAAELDGILVGHCDVTDPATIDAVFD ELKAKWGKIDFVVHAIAFSDKDQLDGRYVETTADNFSKTMLISCYSLTAIAQRAEKLMPDGGSILTLTYYGAEKWMPHYN VMGVAKAALEASVRYLAADLGEKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNSPMRRTVTIEEVGDSALYFLSGLS RGVTGEIHHVDSGYHVVGMKRPDAPDISLAKD
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=257, Percent_Identity=50.5836575875486, Blast_Score=254, Evalue=4e-69, Organism=Escherichia coli, GI1789378, Length=263, Percent_Identity=28.1368821292776, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI2367365, Length=253, Percent_Identity=28.8537549407115, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787905, Length=190, Percent_Identity=29.4736842105263, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787335, Length=252, Percent_Identity=25, Blast_Score=61, Evalue=7e-11,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 29435; Mature: 29435
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTGSGLMQGKRGVILGVANNRSIAWGIAKACRAHGAEIALTWQGDALKKRVMPLAAELD CCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCC GILVGHCDVTDPATIDAVFDELKAKWGKIDFVVHAIAFSDKDQLDGRYVETTADNFSKTM CEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCEE LISCYSLTAIAQRAEKLMPDGGSILTLTYYGAEKWMPHYNVMGVAKAALEASVRYLAADL EEHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHC GEKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNSPMRRTVTIEEVGDSALYFLSGLS CCCCEEEEEEECCCHHHHHHCCCCCEEEEEEECCCCCCCCEEEEHHHCCCHHHHHHHHCC RGVTGEIHHVDSGYHVVGMKRPDAPDISLAKD CCCCCEEEEECCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MVTGSGLMQGKRGVILGVANNRSIAWGIAKACRAHGAEIALTWQGDALKKRVMPLAAELD CCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCC GILVGHCDVTDPATIDAVFDELKAKWGKIDFVVHAIAFSDKDQLDGRYVETTADNFSKTM CEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCEE LISCYSLTAIAQRAEKLMPDGGSILTLTYYGAEKWMPHYNVMGVAKAALEASVRYLAADL EEHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHC GEKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNSPMRRTVTIEEVGDSALYFLSGLS CCCCEEEEEEECCCHHHHHHCCCCCEEEEEEECCCCCCCCEEEEHHHCCCHHHHHHHHCC RGVTGEIHHVDSGYHVVGMKRPDAPDISLAKD CCCCCEEEEECCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]