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The map label for this gene is yhiR [H]

Identifier: 86748305

GI number: 86748305

Start: 1353424

End: 1354281

Strand: Reverse

Name: yhiR [H]

Synonym: RPB_1180

Alternate gene names: 86748305

Gene position: 1354281-1353424 (Counterclockwise)

Preceding gene: 86748307

Following gene: 86748304

Centisome position: 25.4

GC content: 65.27

Gene sequence:

>858_bases
ATGAATTATCGCCACGCCTTTCACGCCGGCAATTTCGCCGATGTCATCAAGCACATCGTGCTGGCCCGGATCCTCACTTA
TCTGCAGGAGAAGCCGGCGCCGTTTCGGGTGGTCGACAGCCATGCCGGCGCCGGGCTCTACGACCTCACCAGCGACGAGG
CCCGCCGCGGCGGCGAATGGGTCACCGGGATCGCCCGGGTGATGCAGGCGCGGTTCAGCGACGAGGCCGGCGAACTGATC
AGGCCCTATCTCGACATCATCCGCGCCTTCAACCCGCAACGCGACCTGACCGCCTATCCCGGATCGCCGCTGATCGCCCG
CGCCCTGCTGCGCCCGCAGGACAGTATGGTCGCCAGCGAATTGGAGCCGCTGGCGCGCAAACAGCTGATCAATGCGCTGC
GCCGCGACACCCAGGCGCGGGTGGTCGATCTCGACGGCTGGCAGGCGCTGACCGCGTTCGTGCCGCCGAAAGAACGCCGC
GGCCTGGTGCTGATCGATCCGTCCTTCGAAAAGAAGGACGAATTCGAGCGATTGGCGCAGGGTTTCAGCACCGCTTACGG
GAAATGGCCGACGGGCATCTATCAGTTGTGGTATCCGGTGAAGAACCGACGCGCCACCGACGCGCTGGCCGACCGCGTTG
CAACCGTTGCCGCAGCCGGCGGCGACGGCAAGTGTCTGCGGCTGGAATTCAGCGTCGCACCGCAACAGCCGGACGGCGCG
CTGACCTCGACCGGACTGCTGGTGGTGAATCCGCCATGGACGCTGGTGTCGGATTTGAGAGTCATCCTTCCTGAGCTGGA
AAGACCTCTCGGCCAAGGGGGCGTCAGCCGTTATCGGCTCGAGCTACCTAAGCCCTGA

Upstream 100 bases:

>100_bases
GGCACGTCCCCCGTAGTCTTACGGACGCGGCGTAACGGCATCCCGGGATGCAGCCCACGACGCCATGGCGGGTCGGGGCG
CCGACTGCTAGGAAAGGCCG

Downstream 100 bases:

>100_bases
CGACTCACGCGCTGATTGGCGCGAAAAGTCGCATTTGGGGCGTAGTCAATCCGCGCAAATCCGTACTATGCTGAGTCATT
GGACTGGCTTTACGTTCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MNYRHAFHAGNFADVIKHIVLARILTYLQEKPAPFRVVDSHAGAGLYDLTSDEARRGGEWVTGIARVMQARFSDEAGELI
RPYLDIIRAFNPQRDLTAYPGSPLIARALLRPQDSMVASELEPLARKQLINALRRDTQARVVDLDGWQALTAFVPPKERR
GLVLIDPSFEKKDEFERLAQGFSTAYGKWPTGIYQLWYPVKNRRATDALADRVATVAAAGGDGKCLRLEFSVAPQQPDGA
LTSTGLLVVNPPWTLVSDLRVILPELERPLGQGGVSRYRLELPKP

Sequences:

>Translated_285_residues
MNYRHAFHAGNFADVIKHIVLARILTYLQEKPAPFRVVDSHAGAGLYDLTSDEARRGGEWVTGIARVMQARFSDEAGELI
RPYLDIIRAFNPQRDLTAYPGSPLIARALLRPQDSMVASELEPLARKQLINALRRDTQARVVDLDGWQALTAFVPPKERR
GLVLIDPSFEKKDEFERLAQGFSTAYGKWPTGIYQLWYPVKNRRATDALADRVATVAAAGGDGKCLRLEFSVAPQQPDGA
LTSTGLLVVNPPWTLVSDLRVILPELERPLGQGGVSRYRLELPKP
>Mature_285_residues
MNYRHAFHAGNFADVIKHIVLARILTYLQEKPAPFRVVDSHAGAGLYDLTSDEARRGGEWVTGIARVMQARFSDEAGELI
RPYLDIIRAFNPQRDLTAYPGSPLIARALLRPQDSMVASELEPLARKQLINALRRDTQARVVDLDGWQALTAFVPPKERR
GLVLIDPSFEKKDEFERLAQGFSTAYGKWPTGIYQLWYPVKNRRATDALADRVATVAAAGGDGKCLRLEFSVAPQQPDGA
LTSTGLLVVNPPWTLVSDLRVILPELERPLGQGGVSRYRLELPKP

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=275, Percent_Identity=42.1818181818182, Blast_Score=222, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 31724; Mature: 31724

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYRHAFHAGNFADVIKHIVLARILTYLQEKPAPFRVVDSHAGAGLYDLTSDEARRGGEW
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCHHHHHCCHH
VTGIARVMQARFSDEAGELIRPYLDIIRAFNPQRDLTAYPGSPLIARALLRPQDSMVASE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
LEPLARKQLINALRRDTQARVVDLDGWQALTAFVPPKERRGLVLIDPSFEKKDEFERLAQ
HHHHHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCHHHCCEEEECCCCCCHHHHHHHHH
GFSTAYGKWPTGIYQLWYPVKNRRATDALADRVATVAAAGGDGKCLRLEFSVAPQQPDGA
HHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC
LTSTGLLVVNPPWTLVSDLRVILPELERPLGQGGVSRYRLELPKP
EECCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
>Mature Secondary Structure
MNYRHAFHAGNFADVIKHIVLARILTYLQEKPAPFRVVDSHAGAGLYDLTSDEARRGGEW
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCHHHHHCCHH
VTGIARVMQARFSDEAGELIRPYLDIIRAFNPQRDLTAYPGSPLIARALLRPQDSMVASE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHH
LEPLARKQLINALRRDTQARVVDLDGWQALTAFVPPKERRGLVLIDPSFEKKDEFERLAQ
HHHHHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCHHHCCEEEECCCCCCHHHHHHHHH
GFSTAYGKWPTGIYQLWYPVKNRRATDALADRVATVAAAGGDGKCLRLEFSVAPQQPDGA
HHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC
LTSTGLLVVNPPWTLVSDLRVILPELERPLGQGGVSRYRLELPKP
EECCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]