Click here to switch to the map view.

The map label for this gene is ycbL [C]

Identifier: 86748288

GI number: 86748288

Start: 1332753

End: 1333685

Strand: Direct

Name: ycbL [C]

Synonym: RPB_1163

Alternate gene names: 86748288

Gene position: 1332753-1333685 (Clockwise)

Preceding gene: 86748287

Following gene: 86748291

Centisome position: 25.0

GC content: 68.49

Gene sequence:

>933_bases
ATGAACGACGCCAGCGCTGCCTCCGACGACGTCCCGTTCAATCGCGACTTCCCGCTGCAGGCCGGCGTGGTCGAGGAGGT
TCGCCCCGGGCTGCGCCGCGTGCTCTGCAACAACCCGTCGCCGTTCACCTTCACCGGCACGGTCAGCTACATCATCGGCA
CCGGCAAGGTCGCGATCGTCGATCCCGGCCCGGACAGCGAGGCCCACGCGCAGGCGCTGATCGACGCAGTGAAGGGCGAG
ACCGTCACCCACATTCTCGTCACCCACACGCATAAGGACCATTCGCCCGGCACGCCGCGGCTGAAGGCCCTGACCGGCGC
CACCGTCTATGCCGAAGGCCCGCACCGCGCCTCGCGGCCGTATTTCGAGAGCGAGACGGTGTCGACCGAATCCGGCGCCG
ACCGCGCGTTCCGGCCCGACGTGACGATCCGCGACGGCGACGTGATCGAGGGCGACGGCTGGGCGGTGGAAGCGGTGGCG
ACGCCCGGCCACACCGCCAACCACATGGCGTTCGCCTGGAAGGAGCGCGACGCGATCTTCGTCGGCGATCACATCATGGG
CTGGTCGACCTCGATCGTGGCGCCGCCCGATGGCTCGATGGTCGACTACATGGAGTCGCTCGACCGGCTGATGGCGCGCG
ACGAGCAACTGTATCTGTCGGGGCATGGCGCCGAGATCCTCGAGGGCCCGCGCTATTCGCGCTTCCTCAAGCGCCACCGC
CAGGCCCGCGAAGCCTCGATCCTGCATCGCCTCGCCAAGGGCGAGACCGACATCCCGACCATGGTCCGCGCCATCTATAT
CGGCATCGACCCGCGCCTGATCGGCGCCGCCGGCTATTCGGTGCTGGCGCATCTCGAAGATTTGGTGATCCGCGGCGTCG
TCACCACCGACGGCGATCCGCTGATCGGCGGGCGCTATCGGCTGGCGAAGTAA

Upstream 100 bases:

>100_bases
GCGGCGCATCACTTCGCTTCGCTCGTGCTGCACCGCGCCCGGGACACGCTGGTCGGATGGGTGACAACAGATAACAAACA
ACAACATCACCGGAAACGCC

Downstream 100 bases:

>100_bases
TAGAACTTGGCCTGCACGGCGGCGGTTTGTCATGGACTGCCGTGCAGCCGGCGCACGCCACCTCTCCCGCTTGCGGGAGA
GGTCGGATCGCGCAGCGATC

Product: Beta-lactamase-like

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Hydrolase; Beta-Lactamase-Like; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase Glyoxylase; Beta-Lactamase-Like Protein; Beta-Lactamase Family Protein; Beta-Lactamase; Hydroxyacylglutathione Hydrolase; Metallo-Beta-Lactamase Domain Protein; Hydrolase Protein; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Family Hydrolase; Glyoxalase II Family Zn-Dependent Hydrolase; Zinc-Dependent Hydrolase; Metallo-Beta-Lactamase; Hydrolase/Glyoxylase; Nudix Hydrolase; NUDIX HydrolaseBeta-Lactamase-Like; Beta-Lactamase Class B; Glyoxalase II Family Protein; Beta-Lactamase-Like Hydrolase

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNDASAASDDVPFNRDFPLQAGVVEEVRPGLRRVLCNNPSPFTFTGTVSYIIGTGKVAIVDPGPDSEAHAQALIDAVKGE
TVTHILVTHTHKDHSPGTPRLKALTGATVYAEGPHRASRPYFESETVSTESGADRAFRPDVTIRDGDVIEGDGWAVEAVA
TPGHTANHMAFAWKERDAIFVGDHIMGWSTSIVAPPDGSMVDYMESLDRLMARDEQLYLSGHGAEILEGPRYSRFLKRHR
QAREASILHRLAKGETDIPTMVRAIYIGIDPRLIGAAGYSVLAHLEDLVIRGVVTTDGDPLIGGRYRLAK

Sequences:

>Translated_310_residues
MNDASAASDDVPFNRDFPLQAGVVEEVRPGLRRVLCNNPSPFTFTGTVSYIIGTGKVAIVDPGPDSEAHAQALIDAVKGE
TVTHILVTHTHKDHSPGTPRLKALTGATVYAEGPHRASRPYFESETVSTESGADRAFRPDVTIRDGDVIEGDGWAVEAVA
TPGHTANHMAFAWKERDAIFVGDHIMGWSTSIVAPPDGSMVDYMESLDRLMARDEQLYLSGHGAEILEGPRYSRFLKRHR
QAREASILHRLAKGETDIPTMVRAIYIGIDPRLIGAAGYSVLAHLEDLVIRGVVTTDGDPLIGGRYRLAK
>Mature_310_residues
MNDASAASDDVPFNRDFPLQAGVVEEVRPGLRRVLCNNPSPFTFTGTVSYIIGTGKVAIVDPGPDSEAHAQALIDAVKGE
TVTHILVTHTHKDHSPGTPRLKALTGATVYAEGPHRASRPYFESETVSTESGADRAFRPDVTIRDGDVIEGDGWAVEAVA
TPGHTANHMAFAWKERDAIFVGDHIMGWSTSIVAPPDGSMVDYMESLDRLMARDEQLYLSGHGAEILEGPRYSRFLKRHR
QAREASILHRLAKGETDIPTMVRAIYIGIDPRLIGAAGYSVLAHLEDLVIRGVVTTDGDPLIGGRYRLAK

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7705793, Length=232, Percent_Identity=32.3275862068966, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17537503, Length=242, Percent_Identity=29.7520661157025, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI193205216, Length=242, Percent_Identity=29.7520661157025, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI20129357, Length=268, Percent_Identity=28.3582089552239, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33658; Mature: 33658

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDASAASDDVPFNRDFPLQAGVVEEVRPGLRRVLCNNPSPFTFTGTVSYIIGTGKVAIV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEE
DPGPDSEAHAQALIDAVKGETVTHILVTHTHKDHSPGTPRLKALTGATVYAEGPHRASRP
CCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCC
YFESETVSTESGADRAFRPDVTIRDGDVIEGDGWAVEAVATPGHTANHMAFAWKERDAIF
CCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCEEEEEEECCCCCCCCEEEEEECCCEEE
VGDHIMGWSTSIVAPPDGSMVDYMESLDRLMARDEQLYLSGHGAEILEGPRYSRFLKRHR
ECCEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHH
QAREASILHRLAKGETDIPTMVRAIYIGIDPRLIGAAGYSVLAHLEDLVIRGVVTTDGDP
HHHHHHHHHHHHCCCCCHHHEEEEEEECCCCEEEHHHHHHHHHHHHHHHHEEEEECCCCC
LIGGRYRLAK
CCCCCEECCC
>Mature Secondary Structure
MNDASAASDDVPFNRDFPLQAGVVEEVRPGLRRVLCNNPSPFTFTGTVSYIIGTGKVAIV
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEE
DPGPDSEAHAQALIDAVKGETVTHILVTHTHKDHSPGTPRLKALTGATVYAEGPHRASRP
CCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCC
YFESETVSTESGADRAFRPDVTIRDGDVIEGDGWAVEAVATPGHTANHMAFAWKERDAIF
CCCCCCCCCCCCCCCCCCCCEEECCCCEEECCCEEEEEEECCCCCCCCEEEEEECCCEEE
VGDHIMGWSTSIVAPPDGSMVDYMESLDRLMARDEQLYLSGHGAEILEGPRYSRFLKRHR
ECCEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHH
QAREASILHRLAKGETDIPTMVRAIYIGIDPRLIGAAGYSVLAHLEDLVIRGVVTTDGDP
HHHHHHHHHHHHCCCCCHHHEEEEEEECCCCEEEHHHHHHHHHHHHHHHHEEEEECCCCC
LIGGRYRLAK
CCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA