| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is modC2 [H]
Identifier: 86747978
GI number: 86747978
Start: 977801
End: 978370
Strand: Direct
Name: modC2 [H]
Synonym: RPB_0852
Alternate gene names: 86747978
Gene position: 977801-978370 (Clockwise)
Preceding gene: 86747975
Following gene: 86747980
Centisome position: 18.34
GC content: 69.3
Gene sequence:
>570_bases ATGACCTTCGATTCCCAATGCGATCTCGCGGCGCTGGTCTACGACCCCGGCGACGATCCCGACGCGCTGCTCCACGGCTT CGCGGCCGATCTCAATGCGCGCGGCACTCGCACCGTCGGCCTGGTGCAGTTCGCGCATCGCGTGGCGGACGTGCCGCAAT TGTCGGCGACGCTGCTGCACAGCGGCGAGCAACTGCCGCTGTATCAGAACCTCGGTTCGCAGGCGTCCGGCTGCCGGCTC GATCCCGGCCAGCTACTGGCGGCCGGCGGCCGCGTCGGCACGGCGATCGGCCAGGGCGCCGACCTCGTCATCATCAACCG CTTCGGCCAGCAGGAGAGCGAAGGCCGCGGGCTGCTGCATCTGATCGTTCAGGCGCTGAGCGCCGACATCCCGCTGGTGA TCGCGGTCCCGAACAAGCGCTTCGACGCCTGGATCCGGTTCGCCGACGGCATGAGCGTGCGGCTGCCCTGCGAGCGCCGG GCGCTGGAGGCGTGGTGGTCCAACCTCTCTCCGCGCGGCAGAGGCAGTGCGCCGAACGCGCACACCACGGTGTGCGAGGT CTACAAATAA
Upstream 100 bases:
>100_bases CATACGTTATATATTTATCTATACGACGACGGGCCGGCGCCGCTGAAGTGCGGCGGACCCTCCTCCGTCCGCGGAGCGCC GGCAAACCGGCGGAGAGAAG
Downstream 100 bases:
>100_bases ATCTCCAGAGCCGGCCGTAGCCGGCCCTGGTCGATGTCGCGATTCGCCAAGTGGTCAGTCTTCGAGCAGACTGCGCAGCA TCCACGCGGTCTTTTCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTFDSQCDLAALVYDPGDDPDALLHGFAADLNARGTRTVGLVQFAHRVADVPQLSATLLHSGEQLPLYQNLGSQASGCRL DPGQLLAAGGRVGTAIGQGADLVIINRFGQQESEGRGLLHLIVQALSADIPLVIAVPNKRFDAWIRFADGMSVRLPCERR ALEAWWSNLSPRGRGSAPNAHTTVCEVYK
Sequences:
>Translated_189_residues MTFDSQCDLAALVYDPGDDPDALLHGFAADLNARGTRTVGLVQFAHRVADVPQLSATLLHSGEQLPLYQNLGSQASGCRL DPGQLLAAGGRVGTAIGQGADLVIINRFGQQESEGRGLLHLIVQALSADIPLVIAVPNKRFDAWIRFADGMSVRLPCERR ALEAWWSNLSPRGRGSAPNAHTTVCEVYK >Mature_188_residues TFDSQCDLAALVYDPGDDPDALLHGFAADLNARGTRTVGLVQFAHRVADVPQLSATLLHSGEQLPLYQNLGSQASGCRLD PGQLLAAGGRVGTAIGQGADLVIINRFGQQESEGRGLLHLIVQALSADIPLVIAVPNKRFDAWIRFADGMSVRLPCERRA LEAWWSNLSPRGRGSAPNAHTTVCEVYK
Specific function: Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015852 - InterPro: IPR003593 - InterPro: IPR018912 - InterPro: IPR008995 - InterPro: IPR011868 - InterPro: IPR005116 [H]
Pfam domain/function: PF00005 ABC_tran; PF10649 DUF2478; PF03459 TOBE [H]
EC number: =3.6.3.29 [H]
Molecular weight: Translated: 20270; Mature: 20139
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDSQCDLAALVYDPGDDPDALLHGFAADLNARGTRTVGLVQFAHRVADVPQLSATLLH CCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH SGEQLPLYQNLGSQASGCRLDPGQLLAAGGRVGTAIGQGADLVIINRFGQQESEGRGLLH CCCCCCHHHHCCCCCCCCCCCHHHEEECCCCEEHHHCCCCCEEEEECCCCCCCCCCHHHH LIVQALSADIPLVIAVPNKRFDAWIRFADGMSVRLPCERRALEAWWSNLSPRGRGSAPNA HHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCC HTTVCEVYK CCCEEEECC >Mature Secondary Structure TFDSQCDLAALVYDPGDDPDALLHGFAADLNARGTRTVGLVQFAHRVADVPQLSATLLH CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH SGEQLPLYQNLGSQASGCRLDPGQLLAAGGRVGTAIGQGADLVIINRFGQQESEGRGLLH CCCCCCHHHHCCCCCCCCCCCHHHEEECCCCEEHHHCCCCCEEEEECCCCCCCCCCHHHH LIVQALSADIPLVIAVPNKRFDAWIRFADGMSVRLPCERRALEAWWSNLSPRGRGSAPNA HHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCC HTTVCEVYK CCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]