| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is 86747975
Identifier: 86747975
GI number: 86747975
Start: 968497
End: 969090
Strand: Direct
Name: 86747975
Synonym: RPB_0849
Alternate gene names: NA
Gene position: 968497-969090 (Clockwise)
Preceding gene: 86747971
Following gene: 86747978
Centisome position: 18.17
GC content: 64.31
Gene sequence:
>594_bases ATGCCCACGCCCCTCGACGATCTGATGGCCAGACTGCGCGCGGTCGAGGCCGAGATCGAGGTCGAGCTGACCAGGCGCCG CGAGGCGCTGCGCTGGCATCTGGACAACCAGCGGATCGTGTTCGAGCAGGGCGTCGAGCGATTGCACGGCGCGATCAAGA TCCGGCTGTCGCGCTACATCCGCGACGCCAATCCGTGGATCGTGCTCACCGCGCCGGTGATCTACGCGCTGATCGTGCCG TTCGTGATCCTCGATGTCAGCGTGATGGCCTTTCAGGCGATCTGCTTTCCGATCTACAAGATCCCGAAAGTGCGCCGCCG CGACTATCTGGTGTTCGACCGCCACCACCTCGCTTATCTGAACCTCTTGGAAAAGATCAACTGCGCCTACTGCTCCTACG GCAACGGCGTGATCTCCTTCGCCCGCGAGGTCGCGGCGCGGACCGAGCTGTATTGGTGCCCGATCAAGCACGCCCGCCGC GTATTAGGCCCGCACCCGCACTATCAGGGCTTCGCCGATTTCGGCGACGCCGAAGCCTATCGGGCCAAGATCGTCGGGAT GCAGGGCGGGGTGAAGGTCGAGGACGGCGGGTAG
Upstream 100 bases:
>100_bases GCGGGCGGCGGTGATTTTTGCGGTGCGCGGGAAATCCGGTTGCGCGGGCTGCTGTTCCATGCGCCGGTGGCGCTCGCCGA CCCACCCGAAAGGACTCCCG
Downstream 100 bases:
>100_bases ACCTGCGCCGGGAGCCGGGGCTACTGATCGCTCAACCTCGTCATGGCCGGCGACGAACGCGGGCACGGCGAGTCGGATCA GCCGGCTTGTTCTTTGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPTPLDDLMARLRAVEAEIEVELTRRREALRWHLDNQRIVFEQGVERLHGAIKIRLSRYIRDANPWIVLTAPVIYALIVP FVILDVSVMAFQAICFPIYKIPKVRRRDYLVFDRHHLAYLNLLEKINCAYCSYGNGVISFAREVAARTELYWCPIKHARR VLGPHPHYQGFADFGDAEAYRAKIVGMQGGVKVEDGG
Sequences:
>Translated_197_residues MPTPLDDLMARLRAVEAEIEVELTRRREALRWHLDNQRIVFEQGVERLHGAIKIRLSRYIRDANPWIVLTAPVIYALIVP FVILDVSVMAFQAICFPIYKIPKVRRRDYLVFDRHHLAYLNLLEKINCAYCSYGNGVISFAREVAARTELYWCPIKHARR VLGPHPHYQGFADFGDAEAYRAKIVGMQGGVKVEDGG >Mature_196_residues PTPLDDLMARLRAVEAEIEVELTRRREALRWHLDNQRIVFEQGVERLHGAIKIRLSRYIRDANPWIVLTAPVIYALIVPF VILDVSVMAFQAICFPIYKIPKVRRRDYLVFDRHHLAYLNLLEKINCAYCSYGNGVISFAREVAARTELYWCPIKHARRV LGPHPHYQGFADFGDAEAYRAKIVGMQGGVKVEDGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22678; Mature: 22547
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPLDDLMARLRAVEAEIEVELTRRREALRWHLDNQRIVFEQGVERLHGAIKIRLSRYI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHH RDANPWIVLTAPVIYALIVPFVILDVSVMAFQAICFPIYKIPKVRRRDYLVFDRHHLAYL HCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHH NLLEKINCAYCSYGNGVISFAREVAARTELYWCPIKHARRVLGPHPHYQGFADFGDAEAY HHHHHHCHHHCCCCCHHHHHHHHHHHHHHEEECCHHHHHHHCCCCCCCCCCCCCCCCHHH RAKIVGMQGGVKVEDGG HHEEEECCCCEEECCCC >Mature Secondary Structure PTPLDDLMARLRAVEAEIEVELTRRREALRWHLDNQRIVFEQGVERLHGAIKIRLSRYI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEHHHHHHHHHHHHHHHHHHHHH RDANPWIVLTAPVIYALIVPFVILDVSVMAFQAICFPIYKIPKVRRRDYLVFDRHHLAYL HCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHH NLLEKINCAYCSYGNGVISFAREVAARTELYWCPIKHARRVLGPHPHYQGFADFGDAEAY HHHHHHCHHHCCCCCHHHHHHHHHHHHHHEEECCHHHHHHHCCCCCCCCCCCCCCCCHHH RAKIVGMQGGVKVEDGG HHEEEECCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA