Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is 86747914

Identifier: 86747914

GI number: 86747914

Start: 883066

End: 884331

Strand: Direct

Name: 86747914

Synonym: RPB_0788

Alternate gene names: NA

Gene position: 883066-884331 (Clockwise)

Preceding gene: 86747912

Following gene: 86747915

Centisome position: 16.56

GC content: 63.74

Gene sequence:

>1266_bases
ATGACTGCCGTCGTCTCGTCCGTCGCCGAACAGACCGCAGGAGCGCCGCCGGGAGGCTTGCCGCCGACGGACGCTGCCGC
GCTGTCGTCGCCGCCGCTGCAGCCGGAGCTGCGCAAGCCGGCGCCGAAGCGGGAATTGCGGCTCGATCTGTTCCGCGGCC
TGGCGCTGTGGCTGATCTTCATCGATCATCTGCCGGCCAATGTGCTGACCTGGCTGACGATCCGGAACTACGGCTTTTCC
GACGCCACCGAGATCTTCATCTTCATTTCCGGCTACACCGCCGCTTTCGTCTACGGACGGGCGATGCGCGATCAGGGCGT
GGTGGTGGCGTCGGCGCGGATCATGAAGCGGGTCTGGCAGATCTATGTCGCCCACGTGTTTCTGTTCACGATCTTCCTCG
CCGAGATCTCCTACGTCGCCACCAGCTTCCAGAACCCGCTCTACACCGAGGAAATGGGCATCCTGGATTTCCTCAAACAG
CCCGACGTCACCATCGTGCAGGCGCTGCTGCTGCGGTTTCGCCCGGTCAATATGGACGTGCTGCCGCTGTACATCGTGCT
GATGTTCTTCCTGCCGCCGATCCTGTGGACGATGCGGCGCTCGCCCGATCTGGCGCTGGCGCTGTCGACCGCGCTCTATG
TCGCGACCTGGCAGTTCGACCTGCACCTCACCGCCTATCCGAGCGGCGTCTGGGCGTTCAATCCCTACGCATGGCAGTTG
CTGTTCGTGTTCGGCGCCTGGTGCGCGATGGGCGGCGCGCAGCGGCTGTCGCGGGTGCTGGCGTCGAACATCACGCTGGG
GTTGTCGGTGGCCTATCTGCTGGCGGCGTTCTTCATCGTGCTGACCTGGCACATGCCGCAGCTCTATCACATCCTGCCGA
AATGGCTCGAGCAGTGGATGTACCCGATCGACAAGCCCAATCTCGACGTGCTGCGGTTCGCCCACTTCCTGGCGCTGGCG
GCGATCACCGTGCGGTTTCTGCCCCGCGACTGGCCCGGCCTCAATTCGGTCTGGCTGCGGCCGATGGTGCTGTGCGGCCA
GCATTCGCTGGAAATCTTCTGCCTCGGCATCTTCCTTGCATTCGCGGGCTACTTCATATTGGCCGAGATCTCCGGCGGAG
CGGTGATGCATTTCTTCGTCAGTCTGGCCGGCGTCGTTATCATGTCCGCCTCGGCATGGCTGCTTTCGTGGTACAAGAAC
GCGGTGGCGAAGGGCGGCAATCAGAAAACAAGCCCGGATGCCGACCTCGCAGGGGGGGATGCATGA

Upstream 100 bases:

>100_bases
TTCCGGTTCAAAATCAGGGACGGAGCTCCGGATTCCTGATCCGAGAACATGTGCGCCATGGCGAGGATTCGCCGGTTCGG
AAACCCCGGTTCGAAAACCC

Downstream 100 bases:

>100_bases
GGGCGGGCGGAATGGCCGGCTTGGGATGGATGCTGGGCTTGGCCCTGCTCGGCGCGCTCGCGGCGCCGGCCGGCGCTGCG
GCCGAGACGTCCCCGCAGGG

Product: putative OpgC protein

Products: NA

Alternate protein names: Transmembrane Protein; Acyltransferase Family Protein; Transmembrane Protein OpgC

Number of amino acids: Translated: 421; Mature: 420

Protein sequence:

>421_residues
MTAVVSSVAEQTAGAPPGGLPPTDAAALSSPPLQPELRKPAPKRELRLDLFRGLALWLIFIDHLPANVLTWLTIRNYGFS
DATEIFIFISGYTAAFVYGRAMRDQGVVVASARIMKRVWQIYVAHVFLFTIFLAEISYVATSFQNPLYTEEMGILDFLKQ
PDVTIVQALLLRFRPVNMDVLPLYIVLMFFLPPILWTMRRSPDLALALSTALYVATWQFDLHLTAYPSGVWAFNPYAWQL
LFVFGAWCAMGGAQRLSRVLASNITLGLSVAYLLAAFFIVLTWHMPQLYHILPKWLEQWMYPIDKPNLDVLRFAHFLALA
AITVRFLPRDWPGLNSVWLRPMVLCGQHSLEIFCLGIFLAFAGYFILAEISGGAVMHFFVSLAGVVIMSASAWLLSWYKN
AVAKGGNQKTSPDADLAGGDA

Sequences:

>Translated_421_residues
MTAVVSSVAEQTAGAPPGGLPPTDAAALSSPPLQPELRKPAPKRELRLDLFRGLALWLIFIDHLPANVLTWLTIRNYGFS
DATEIFIFISGYTAAFVYGRAMRDQGVVVASARIMKRVWQIYVAHVFLFTIFLAEISYVATSFQNPLYTEEMGILDFLKQ
PDVTIVQALLLRFRPVNMDVLPLYIVLMFFLPPILWTMRRSPDLALALSTALYVATWQFDLHLTAYPSGVWAFNPYAWQL
LFVFGAWCAMGGAQRLSRVLASNITLGLSVAYLLAAFFIVLTWHMPQLYHILPKWLEQWMYPIDKPNLDVLRFAHFLALA
AITVRFLPRDWPGLNSVWLRPMVLCGQHSLEIFCLGIFLAFAGYFILAEISGGAVMHFFVSLAGVVIMSASAWLLSWYKN
AVAKGGNQKTSPDADLAGGDA
>Mature_420_residues
TAVVSSVAEQTAGAPPGGLPPTDAAALSSPPLQPELRKPAPKRELRLDLFRGLALWLIFIDHLPANVLTWLTIRNYGFSD
ATEIFIFISGYTAAFVYGRAMRDQGVVVASARIMKRVWQIYVAHVFLFTIFLAEISYVATSFQNPLYTEEMGILDFLKQP
DVTIVQALLLRFRPVNMDVLPLYIVLMFFLPPILWTMRRSPDLALALSTALYVATWQFDLHLTAYPSGVWAFNPYAWQLL
FVFGAWCAMGGAQRLSRVLASNITLGLSVAYLLAAFFIVLTWHMPQLYHILPKWLEQWMYPIDKPNLDVLRFAHFLALAA
ITVRFLPRDWPGLNSVWLRPMVLCGQHSLEIFCLGIFLAFAGYFILAEISGGAVMHFFVSLAGVVIMSASAWLLSWYKNA
VAKGGNQKTSPDADLAGGDA

Specific function: Unknown

COG id: COG4645

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47032; Mature: 46901

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVVSSVAEQTAGAPPGGLPPTDAAALSSPPLQPELRKPAPKRELRLDLFRGLALWLIF
CHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHH
IDHLPANVLTWLTIRNYGFSDATEIFIFISGYTAAFVYGRAMRDQGVVVASARIMKRVWQ
HHHCCHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
IYVAHVFLFTIFLAEISYVATSFQNPLYTEEMGILDFLKQPDVTIVQALLLRFRPVNMDV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH
LPLYIVLMFFLPPILWTMRRSPDLALALSTALYVATWQFDLHLTAYPSGVWAFNPYAWQL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEEEEEEEECCCCCEEECHHHHHH
LFVFGAWCAMGGAQRLSRVLASNITLGLSVAYLLAAFFIVLTWHMPQLYHILPKWLEQWM
HHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YPIDKPNLDVLRFAHFLALAAITVRFLPRDWPGLNSVWLRPMVLCGQHSLEIFCLGIFLA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
FAGYFILAEISGGAVMHFFVSLAGVVIMSASAWLLSWYKNAVAKGGNQKTSPDADLAGGD
HHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
A
C
>Mature Secondary Structure 
TAVVSSVAEQTAGAPPGGLPPTDAAALSSPPLQPELRKPAPKRELRLDLFRGLALWLIF
HHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHH
IDHLPANVLTWLTIRNYGFSDATEIFIFISGYTAAFVYGRAMRDQGVVVASARIMKRVWQ
HHHCCHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
IYVAHVFLFTIFLAEISYVATSFQNPLYTEEMGILDFLKQPDVTIVQALLLRFRPVNMDV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCH
LPLYIVLMFFLPPILWTMRRSPDLALALSTALYVATWQFDLHLTAYPSGVWAFNPYAWQL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEEEEEEEECCCCCEEECHHHHHH
LFVFGAWCAMGGAQRLSRVLASNITLGLSVAYLLAAFFIVLTWHMPQLYHILPKWLEQWM
HHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YPIDKPNLDVLRFAHFLALAAITVRFLPRDWPGLNSVWLRPMVLCGQHSLEIFCLGIFLA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
FAGYFILAEISGGAVMHFFVSLAGVVIMSASAWLLSWYKNAVAKGGNQKTSPDADLAGGD
HHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA