| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is phoU [H]
Identifier: 86747906
GI number: 86747906
Start: 873749
End: 874465
Strand: Direct
Name: phoU [H]
Synonym: RPB_0780
Alternate gene names: 86747906
Gene position: 873749-874465 (Clockwise)
Preceding gene: 86747905
Following gene: 86747907
Centisome position: 16.39
GC content: 65.69
Gene sequence:
>717_bases ATGGGCTTCGAGCACACCACCAAGGCGTTCGACGGCGACCTGCAGGAGCTGACCCGGATGGTCGCCGAGATGGGCGGCCT GGCCGAGCGCCAGATCGTCGATTCGGTCGACGCGCTGGTCCGGCGCGACGTCGCACTCGGCGCCCGCGTCGTCGCGGCCG ATTCCGAGATCGACCAGATGCAGCGCGTCATCGAGGAGCGCGCCGTGCTGACGATCGCGCGGCGGCAGCCGATGGCGGTC GACCTGCGCGAGATCGTCGGCGCGATGCGCGTCGCCACTGATCTCGAGCGGATCGGCGACCTGTCGAAGAACATCGCCAA GCGGGTCAACGCGATCGACAGCGACTTCCACCCGCTGAAGCTGATCCGCGGCCTCGAGCACATGACCGACCTGGTGCAGT CGCAGGTCAAGTCGGTGCTGGACGCCTACACCGCGCACGACCTGCCGGCCGCGATGGTGGTGTGGAACGGCGACGAGGAA GTCGACGCGATCTGCACCTCGCTGTTCCGCGAGCTCTTGACCTACATGATGGAAGATCCGCGCAACATCTCGTTCTGCAT CCACCTGATGTTCTGCGCCAAGAACATCGAGCGGATCGGCGATCACGCCACCAACATCGCCGAGACGGTGTTCTACATGG TCGAGGGCGAGCAGCTTCTCGAAAAGCGCCCGAAGGGCGACATGACGACTTTCGCCAACGCGACGCCGGGCAACTGA
Upstream 100 bases:
>100_bases GGTCCGACCGACAAGATCTTCACCTCGCCGAACGACCGGCGCACCCAGGACTACATCACCGGCCGGTTCGGCTGACGCGC CAGGCGCGAGGAGAATGAAT
Downstream 100 bases:
>100_bases CGCGCAGGACGGCGGGATGCGGAGCGCATCCCGGATACGCTCGACTGAAGACGAGGACGACACATGGGTGCGCGCATTCT GGTGGTTGAAGACGAGGAAG
Product: phosphate uptake regulator, PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MGFEHTTKAFDGDLQELTRMVAEMGGLAERQIVDSVDALVRRDVALGARVVAADSEIDQMQRVIEERAVLTIARRQPMAV DLREIVGAMRVATDLERIGDLSKNIAKRVNAIDSDFHPLKLIRGLEHMTDLVQSQVKSVLDAYTAHDLPAAMVVWNGDEE VDAICTSLFRELLTYMMEDPRNISFCIHLMFCAKNIERIGDHATNIAETVFYMVEGEQLLEKRPKGDMTTFANATPGN
Sequences:
>Translated_238_residues MGFEHTTKAFDGDLQELTRMVAEMGGLAERQIVDSVDALVRRDVALGARVVAADSEIDQMQRVIEERAVLTIARRQPMAV DLREIVGAMRVATDLERIGDLSKNIAKRVNAIDSDFHPLKLIRGLEHMTDLVQSQVKSVLDAYTAHDLPAAMVVWNGDEE VDAICTSLFRELLTYMMEDPRNISFCIHLMFCAKNIERIGDHATNIAETVFYMVEGEQLLEKRPKGDMTTFANATPGN >Mature_237_residues GFEHTTKAFDGDLQELTRMVAEMGGLAERQIVDSVDALVRRDVALGARVVAADSEIDQMQRVIEERAVLTIARRQPMAVD LREIVGAMRVATDLERIGDLSKNIAKRVNAIDSDFHPLKLIRGLEHMTDLVQSQVKSVLDAYTAHDLPAAMVVWNGDEEV DAICTSLFRELLTYMMEDPRNISFCIHLMFCAKNIERIGDHATNIAETVFYMVEGEQLLEKRPKGDMTTFANATPGN
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=214, Percent_Identity=35.5140186915888, Blast_Score=140, Evalue=9e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26608; Mature: 26477
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFEHTTKAFDGDLQELTRMVAEMGGLAERQIVDSVDALVRRDVALGARVVAADSEIDQM CCCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHH QRVIEERAVLTIARRQPMAVDLREIVGAMRVATDLERIGDLSKNIAKRVNAIDSDFHPLK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LIRGLEHMTDLVQSQVKSVLDAYTAHDLPAAMVVWNGDEEVDAICTSLFRELLTYMMEDP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCC RNISFCIHLMFCAKNIERIGDHATNIAETVFYMVEGEQLLEKRPKGDMTTFANATPGN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEECCCCCCC >Mature Secondary Structure GFEHTTKAFDGDLQELTRMVAEMGGLAERQIVDSVDALVRRDVALGARVVAADSEIDQM CCCCHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHH QRVIEERAVLTIARRQPMAVDLREIVGAMRVATDLERIGDLSKNIAKRVNAIDSDFHPLK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LIRGLEHMTDLVQSQVKSVLDAYTAHDLPAAMVVWNGDEEVDAICTSLFRELLTYMMEDP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCC RNISFCIHLMFCAKNIERIGDHATNIAETVFYMVEGEQLLEKRPKGDMTTFANATPGN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]