Click here to switch to the map view.

The map label for this gene is ybhN [C]

Identifier: 86747900

GI number: 86747900

Start: 867243

End: 868277

Strand: Direct

Name: ybhN [C]

Synonym: RPB_0774

Alternate gene names: 86747900

Gene position: 867243-868277 (Clockwise)

Preceding gene: 86747899

Following gene: 86747901

Centisome position: 16.27

GC content: 65.6

Gene sequence:

>1035_bases
ATGATGGCCGCAATCGGCAGGGCGATCGCGTTTCTGCGCGAGAAGCAAATCCTGCGCAAGCTGGGAGTTGCGATCAGCAT
CGCGGTCATCGCCGCGGCTTGCTACGTTCTCTTTCACCAGCTCCGCGGCATCGACGTCGACGACGTCCTCGCCGCGATGC
AGAAGATCGCGCCGAGTTCGATCGTGATGGCCGGGCTGTTCGTCGCCGCGGGCTACTTCACCCTGACGTTCTACGACCTG
TTCGCGCTGCGGACCATCGGCCGCAACGACGTCCCCTATCGCACCGCCGCGCTCGCTGCCTTCACCAGCTATTCGATCGG
CCACAATGTCGGCGCCAGCGTGTTCACCGGTGGCGCGGTGCGCTACCGGATCTATTCGGCCTGGAGCCTCGACGGCATCG
ACGTCGCCAAGATCTGCTTTCTCGCCGGCCTGACCTTCTGGCTCGGCAACGCCGCCGTGCTCGGCATGGGCATCGGCTAT
CATCCGGAAGCGGCGTCCTCGATCAATCAGCTGCCGCCGTGGCTCAATCGCGTGCTGGCGCTGGCGATCCTGTGCGGGCT
GGCGGCCTATGTGCTGTGGGTATCGGTCAAGCGGCGCCGCGTCGGCCGCGGCAGCTGGACCGTCGATCTCCCCGGCGGGC
CGCTGACGATGCTGCAGATCGGCATCGGCATCGTCGATCTCGGCTTCTGCGCGCTGGCGATGTATGTGCTGGTGCCGGAG
GAGCCCAATCTCGGTTTCGTGGTCGTGGCGGTGATCTTCGTCTCCGCCACGCTGCTCGGCTTCGCCAGCCATTCGCCGGG
CGGGCTCGGCGTGTTCGATGCCGCGATGCTGGTCGGCCTGTGGCAGATGAACAAGGAAGAGCTGCTGGCCGGCATGCTGC
TGTTCCGGATGCTTTACTACATCGTGCCGTTCGTGCTCTCGGTGATCATTCTCGCGGTCCGCGAGATCGTCATCGGCACG
CGCCTCAAACGGATGGATCGGCTCGCCGCCGCGCTCGATCCGAAGCCGATCCGACAGGATCCCACCCCAGGCTGA

Upstream 100 bases:

>100_bases
CCGGAAGCAAGCTGCCAGAGCCTCCTGGCCACGGACCGGTAACGGTTGCCGTGGTATCGGTCACGACGTCCCAGGCGGCG
GAGAGGGATTCGAGGTCTAG

Downstream 100 bases:

>100_bases
CCATGATCGCGCCGGCATCCGACGAACAAGCCCGCCATGGCGGACCGCCGGTCCCGGCCGCGGACAAGACCACCGTGGCC
GCGGCGACGCCCTGGGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MMAAIGRAIAFLREKQILRKLGVAISIAVIAAACYVLFHQLRGIDVDDVLAAMQKIAPSSIVMAGLFVAAGYFTLTFYDL
FALRTIGRNDVPYRTAALAAFTSYSIGHNVGASVFTGGAVRYRIYSAWSLDGIDVAKICFLAGLTFWLGNAAVLGMGIGY
HPEAASSINQLPPWLNRVLALAILCGLAAYVLWVSVKRRRVGRGSWTVDLPGGPLTMLQIGIGIVDLGFCALAMYVLVPE
EPNLGFVVVAVIFVSATLLGFASHSPGGLGVFDAAMLVGLWQMNKEELLAGMLLFRMLYYIVPFVLSVIILAVREIVIGT
RLKRMDRLAAALDPKPIRQDPTPG

Sequences:

>Translated_344_residues
MMAAIGRAIAFLREKQILRKLGVAISIAVIAAACYVLFHQLRGIDVDDVLAAMQKIAPSSIVMAGLFVAAGYFTLTFYDL
FALRTIGRNDVPYRTAALAAFTSYSIGHNVGASVFTGGAVRYRIYSAWSLDGIDVAKICFLAGLTFWLGNAAVLGMGIGY
HPEAASSINQLPPWLNRVLALAILCGLAAYVLWVSVKRRRVGRGSWTVDLPGGPLTMLQIGIGIVDLGFCALAMYVLVPE
EPNLGFVVVAVIFVSATLLGFASHSPGGLGVFDAAMLVGLWQMNKEELLAGMLLFRMLYYIVPFVLSVIILAVREIVIGT
RLKRMDRLAAALDPKPIRQDPTPG
>Mature_344_residues
MMAAIGRAIAFLREKQILRKLGVAISIAVIAAACYVLFHQLRGIDVDDVLAAMQKIAPSSIVMAGLFVAAGYFTLTFYDL
FALRTIGRNDVPYRTAALAAFTSYSIGHNVGASVFTGGAVRYRIYSAWSLDGIDVAKICFLAGLTFWLGNAAVLGMGIGY
HPEAASSINQLPPWLNRVLALAILCGLAAYVLWVSVKRRRVGRGSWTVDLPGGPLTMLQIGIGIVDLGFCALAMYVLVPE
EPNLGFVVVAVIFVSATLLGFASHSPGGLGVFDAAMLVGLWQMNKEELLAGMLLFRMLYYIVPFVLSVIILAVREIVIGT
RLKRMDRLAAALDPKPIRQDPTPG

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybhN [H]

Homologues:

Organism=Escherichia coli, GI1787006, Length=272, Percent_Identity=27.2058823529412, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 37039; Mature: 37039

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAAIGRAIAFLREKQILRKLGVAISIAVIAAACYVLFHQLRGIDVDDVLAAMQKIAPSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHH
IVMAGLFVAAGYFTLTFYDLFALRTIGRNDVPYRTAALAAFTSYSIGHNVGASVFTGGAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCEE
RYRIYSAWSLDGIDVAKICFLAGLTFWLGNAAVLGMGIGYHPEAASSINQLPPWLNRVLA
EEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHCCCHHHHHHHH
LAILCGLAAYVLWVSVKRRRVGRGSWTVDLPGGPLTMLQIGIGIVDLGFCALAMYVLVPE
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
EPNLGFVVVAVIFVSATLLGFASHSPGGLGVFDAAMLVGLWQMNKEELLAGMLLFRMLYY
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IVPFVLSVIILAVREIVIGTRLKRMDRLAAALDPKPIRQDPTPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MMAAIGRAIAFLREKQILRKLGVAISIAVIAAACYVLFHQLRGIDVDDVLAAMQKIAPSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHH
IVMAGLFVAAGYFTLTFYDLFALRTIGRNDVPYRTAALAAFTSYSIGHNVGASVFTGGAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCEE
RYRIYSAWSLDGIDVAKICFLAGLTFWLGNAAVLGMGIGYHPEAASSINQLPPWLNRVLA
EEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHCCCHHHHHHHH
LAILCGLAAYVLWVSVKRRRVGRGSWTVDLPGGPLTMLQIGIGIVDLGFCALAMYVLVPE
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
EPNLGFVVVAVIFVSATLLGFASHSPGGLGVFDAAMLVGLWQMNKEELLAGMLLFRMLYY
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IVPFVLSVIILAVREIVIGTRLKRMDRLAAALDPKPIRQDPTPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]