Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

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The map label for this gene is yaeT [H]

Identifier: 86747877

GI number: 86747877

Start: 840299

End: 842821

Strand: Direct

Name: yaeT [H]

Synonym: RPB_0751

Alternate gene names: 86747877

Gene position: 840299-842821 (Clockwise)

Preceding gene: 86747875

Following gene: 86747881

Centisome position: 15.76

GC content: 62.5

Gene sequence:

>2523_bases
ATGATACGTCGGTGGGGCACGACAATTGCCAAGTTACTCTTCGCGGCGACGCTGCTGGCGTCGGACGTGACTTCGATGGC
GGGCGTGGCTGCCGCGCAGGTCGCATCCAGCGCCTCCGCGAGCATCGTCGTCGAGGGTAATCGTCGTGTCGAGGCCGACA
CCATCCGCTCCTATTTCAAGCCGGGCCCCGACGGCCGTCTCGACCCGTCGGCGCTCGACGACGGGCTGAAGGGCCTGATC
GCGACCGGCCTGTTTCAGGACGTCAAGATCAACGGCGCCGGAGGCCGTCTGGTGGTGGCCGTGGTCGAGAATCCGGTGAT
CGGTCGGGTCGTGTTCGAGGGCAACAAGAAGATCAAGGACGAACAGCTTTCAGCCGAGCTGCAGTCCAGGCCGCGCGGCG
CGTTGTCGCGAGCGGTGGTGCAGTCGGACACGCTGCGGATCGCCGAGATCTATCGACGTTCGGGTCGCTACGACGTTCGC
GTCACGCCGGAAGTGATCGACCGGCCGAACGGTCGCGTCGACCTGGTGTTTCGCGTCGAAGAGGGCGCGAAGACCGGCGT
CAAGTCGATCGAGTTCGTCGGCAACGTCGCGTTTTCGGCGTCGCGGCTGAGGGACGTGATCCGGACCCGGGAAACCAACT
TCCTGAGCTTTCTCGCCAGTAACGACATCTACGATCCGGATCGGGTGGAAGCCGATCGCGACCTGATTCGGCGGTTCTAT
CTCAAGAACGGCTTCGCGGACGCGCAGGTGGTGGCCGCGCTGACCGAATTCGATCCCGACAAGAAGGGCTTCCTCATCAC
CTTCAAGATCGAGGAAGGGCAGCAGTACCGGATCGGGTCGGTCGATTTCCGCGCCAATATCCCGGGCTTCGACCCGAACT
GGCTGCGCAGCTATTCCCGCGTCAAGGCCGGGGCGCTCTACAACGTCGAACTGCTGGAAAAATCCGTCGAGGAAATGCAG
ATCGAGGCCTCGCGCCGCGGATTTTCCTTCGCGGTGGTGAAGCCCAGCGGCGACCGCAACTTCGACTCGCACACCGTGTC
GGTCACTTTCAACGCCGATGAGGGCGCGCGCATCTACATCGAGCGGATCGAGATCCGCGGCAATACGCGGACGCGCGACT
ACGTGCTCCGGCGCGAGTTCGATGTCGCCGAAGGCGACGCCTACAACCGCGCGCTGGTGGACCGCGCCGAGCGGCGCCTG
AAGAACCTGGATTTCTTCAAGTCGGTGAAGATCGTCACGGAGCCGGGGTCGTCGACCGACCGCGTCATCCTCGCCGTCGA
GGTCGAGGAAAAGTCGACCGGCGATTTCTCGGTCTCGGGCGGCTATTCGACCAGCGACGGCGCACTGGGCGAGGTGTCGG
TCTCCGAACGCAACCTGATGGGGCGCGGTCTGTTTGGGAAGGTGTCGGTGTCCTACGGGCAGTATTCGCGGGGCGCGTCG
CTGTCGATCGTCGAGCCGTATCTGTTCGACTACCGGCTCGCGCTGGGGCTGGACCTCTACTACAAGCAGCAACTTCAGAA
CAGCTACACCAGCTACGATATGACGACGCTGGGGTTCTCGCCCCGTCTCGGCATCGCGTTGCGCGAGGATTTGTCGCTGC
AGTTGCGATACTCGCTGTATCAACAAAAGGTGACGCTGTCGGACGCCTACAACAATTGCAACAACAACGCCGCGAACACC
TCCCTCTCTTACAATCCGACCCCGGCCTACATCAAGGAAGTGCTGGGGGGCGTCGACCCGACCAATGCGAGCGGTTCATC
GTATTACGGCTACGGCTGCTACGCCGACGGCGAAACCAGCCTGCCGGTCCGCAAGGAGCTGGCCGACGGCGCCAAAATCA
CTTCGTCGATCGGCTACACGCTCAATTACAATACGCTGGACAATACCAAGAATCCGACCGACGGGCTTCTTCTCGACTTG
CGCCAGGACTTCGCCGGCGTCGGCGGCGACGTGACCTACTTGAAGACCGTGGGCGACGCGAAATACTACACGCCGCTGGT
CGCCGAAATCGTCGGCCTGATCCACCTGCAAGGCGGCGTGCTCAGCAAGCTCGGCAACAACGAGATCAGGATGCTGGATC
ATTTCCAGATGGGCGCGAACCTGGTGCGCGGCTTTGCGACGAACGGCATCGGACCGCGCGACATCAGTTACTGGAGCATG
AGTGAATCGGGCGATTCGCTGGGCGGCACGAAATATTGGGGCGCGTCGTTCGAATTGCAGATGCCGTTCTGGTTCCTTCC
CAAAGAGGTCGGGTTGAAGGGCGCGGTGTACGCCGACGCGGGATCGTTGTGGGGCTATCAGGGCCCGACCTCGTGGGCCG
CGACCGGCGAAGTGAATTCGTCCGCCTGCCCGCATTGCGGACTGCAATATGACGACAGCAAGATCGTCCGCAGCTCGGTC
GGTGTCGGATTGATCTGGGCGTCGCCGTTCGGCCCGTTGAGGTTCGACTACGCCATCCCACTGTCGAAAGGCAAATACGA
CACCGTGCAGGAGTTCAAATTCGGCGGCGGAACGTCGTTCTAA

Upstream 100 bases:

>100_bases
ATATGATTCTCAATTCTCAGCAACGATTGCGAAATCCGGAGGCCATACCGCCGCCACGCCGATCGCATCATCAGAACACT
GGTAGATCACGAGGTCGGGA

Downstream 100 bases:

>100_bases
GAGCGCGTCATCGAATGACTGAAGCAACGCGGCATTCTCGCGTGCGGAGTCGTCATCCTGAGAGCCTGCCCCGGACTTGA
TCCGGGGTGCGAGCGCAGCG

Product: surface antigen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 840; Mature: 840

Protein sequence:

>840_residues
MIRRWGTTIAKLLFAATLLASDVTSMAGVAAAQVASSASASIVVEGNRRVEADTIRSYFKPGPDGRLDPSALDDGLKGLI
ATGLFQDVKINGAGGRLVVAVVENPVIGRVVFEGNKKIKDEQLSAELQSRPRGALSRAVVQSDTLRIAEIYRRSGRYDVR
VTPEVIDRPNGRVDLVFRVEEGAKTGVKSIEFVGNVAFSASRLRDVIRTRETNFLSFLASNDIYDPDRVEADRDLIRRFY
LKNGFADAQVVAALTEFDPDKKGFLITFKIEEGQQYRIGSVDFRANIPGFDPNWLRSYSRVKAGALYNVELLEKSVEEMQ
IEASRRGFSFAVVKPSGDRNFDSHTVSVTFNADEGARIYIERIEIRGNTRTRDYVLRREFDVAEGDAYNRALVDRAERRL
KNLDFFKSVKIVTEPGSSTDRVILAVEVEEKSTGDFSVSGGYSTSDGALGEVSVSERNLMGRGLFGKVSVSYGQYSRGAS
LSIVEPYLFDYRLALGLDLYYKQQLQNSYTSYDMTTLGFSPRLGIALREDLSLQLRYSLYQQKVTLSDAYNNCNNNAANT
SLSYNPTPAYIKEVLGGVDPTNASGSSYYGYGCYADGETSLPVRKELADGAKITSSIGYTLNYNTLDNTKNPTDGLLLDL
RQDFAGVGGDVTYLKTVGDAKYYTPLVAEIVGLIHLQGGVLSKLGNNEIRMLDHFQMGANLVRGFATNGIGPRDISYWSM
SESGDSLGGTKYWGASFELQMPFWFLPKEVGLKGAVYADAGSLWGYQGPTSWAATGEVNSSACPHCGLQYDDSKIVRSSV
GVGLIWASPFGPLRFDYAIPLSKGKYDTVQEFKFGGGTSF

Sequences:

>Translated_840_residues
MIRRWGTTIAKLLFAATLLASDVTSMAGVAAAQVASSASASIVVEGNRRVEADTIRSYFKPGPDGRLDPSALDDGLKGLI
ATGLFQDVKINGAGGRLVVAVVENPVIGRVVFEGNKKIKDEQLSAELQSRPRGALSRAVVQSDTLRIAEIYRRSGRYDVR
VTPEVIDRPNGRVDLVFRVEEGAKTGVKSIEFVGNVAFSASRLRDVIRTRETNFLSFLASNDIYDPDRVEADRDLIRRFY
LKNGFADAQVVAALTEFDPDKKGFLITFKIEEGQQYRIGSVDFRANIPGFDPNWLRSYSRVKAGALYNVELLEKSVEEMQ
IEASRRGFSFAVVKPSGDRNFDSHTVSVTFNADEGARIYIERIEIRGNTRTRDYVLRREFDVAEGDAYNRALVDRAERRL
KNLDFFKSVKIVTEPGSSTDRVILAVEVEEKSTGDFSVSGGYSTSDGALGEVSVSERNLMGRGLFGKVSVSYGQYSRGAS
LSIVEPYLFDYRLALGLDLYYKQQLQNSYTSYDMTTLGFSPRLGIALREDLSLQLRYSLYQQKVTLSDAYNNCNNNAANT
SLSYNPTPAYIKEVLGGVDPTNASGSSYYGYGCYADGETSLPVRKELADGAKITSSIGYTLNYNTLDNTKNPTDGLLLDL
RQDFAGVGGDVTYLKTVGDAKYYTPLVAEIVGLIHLQGGVLSKLGNNEIRMLDHFQMGANLVRGFATNGIGPRDISYWSM
SESGDSLGGTKYWGASFELQMPFWFLPKEVGLKGAVYADAGSLWGYQGPTSWAATGEVNSSACPHCGLQYDDSKIVRSSV
GVGLIWASPFGPLRFDYAIPLSKGKYDTVQEFKFGGGTSF
>Mature_840_residues
MIRRWGTTIAKLLFAATLLASDVTSMAGVAAAQVASSASASIVVEGNRRVEADTIRSYFKPGPDGRLDPSALDDGLKGLI
ATGLFQDVKINGAGGRLVVAVVENPVIGRVVFEGNKKIKDEQLSAELQSRPRGALSRAVVQSDTLRIAEIYRRSGRYDVR
VTPEVIDRPNGRVDLVFRVEEGAKTGVKSIEFVGNVAFSASRLRDVIRTRETNFLSFLASNDIYDPDRVEADRDLIRRFY
LKNGFADAQVVAALTEFDPDKKGFLITFKIEEGQQYRIGSVDFRANIPGFDPNWLRSYSRVKAGALYNVELLEKSVEEMQ
IEASRRGFSFAVVKPSGDRNFDSHTVSVTFNADEGARIYIERIEIRGNTRTRDYVLRREFDVAEGDAYNRALVDRAERRL
KNLDFFKSVKIVTEPGSSTDRVILAVEVEEKSTGDFSVSGGYSTSDGALGEVSVSERNLMGRGLFGKVSVSYGQYSRGAS
LSIVEPYLFDYRLALGLDLYYKQQLQNSYTSYDMTTLGFSPRLGIALREDLSLQLRYSLYQQKVTLSDAYNNCNNNAANT
SLSYNPTPAYIKEVLGGVDPTNASGSSYYGYGCYADGETSLPVRKELADGAKITSSIGYTLNYNTLDNTKNPTDGLLLDL
RQDFAGVGGDVTYLKTVGDAKYYTPLVAEIVGLIHLQGGVLSKLGNNEIRMLDHFQMGANLVRGFATNGIGPRDISYWSM
SESGDSLGGTKYWGASFELQMPFWFLPKEVGLKGAVYADAGSLWGYQGPTSWAATGEVNSSACPHCGLQYDDSKIVRSSV
GVGLIWASPFGPLRFDYAIPLSKGKYDTVQEFKFGGGTSF

Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Homo sapiens, GI225543166, Length=516, Percent_Identity=21.3178294573643, Blast_Score=74, Evalue=8e-13,
Organism=Escherichia coli, GI1786374, Length=801, Percent_Identity=27.9650436953808, Blast_Score=271, Evalue=1e-73,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 92229; Mature: 92229

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS00539 PYROKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRWGTTIAKLLFAATLLASDVTSMAGVAAAQVASSASASIVVEGNRRVEADTIRSYFK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEECHHHHHHHCC
PGPDGRLDPSALDDGLKGLIATGLFQDVKINGAGGRLVVAVVENPVIGRVVFEGNKKIKD
CCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEECCCEEEEEEECCCCCCCH
EQLSAELQSRPRGALSRAVVQSDTLRIAEIYRRSGRYDVRVTPEVIDRPNGRVDLVFRVE
HHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECHHHHCCCCCCEEEEEEEC
EGAKTGVKSIEFVGNVAFSASRLRDVIRTRETNFLSFLASNDIYDPDRVEADRDLIRRFY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHHHHHHHHHHH
LKNGFADAQVVAALTEFDPDKKGFLITFKIEEGQQYRIGSVDFRANIPGFDPNWLRSYSR
HHCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECEEEEECCCCCCCHHHHHHHHH
VKAGALYNVELLEKSVEEMQIEASRRGFSFAVVKPSGDRNFDSHTVSVTFNADEGARIYI
HHCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEE
ERIEIRGNTRTRDYVLRREFDVAEGDAYNRALVDRAERRLKNLDFFKSVKIVTEPGSSTD
EEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCC
RVILAVEVEEKSTGDFSVSGGYSTSDGALGEVSVSERNLMGRGLFGKVSVSYGQYSRGAS
EEEEEEEECCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCC
LSIVEPYLFDYRLALGLDLYYKQQLQNSYTSYDMTTLGFSPRLGIALREDLSLQLRYSLY
EEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCEEEEEHHH
QQKVTLSDAYNNCNNNAANTSLSYNPTPAYIKEVLGGVDPTNASGSSYYGYGCYADGETS
HHHEEHHHHHCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCC
LPVRKELADGAKITSSIGYTLNYNTLDNTKNPTDGLLLDLRQDFAGVGGDVTYLKTVGDA
CCHHHHHCCCCHHHHCCCEEEEECCCCCCCCCCCCEEEEEHHHHCCCCCCEEEEEECCCC
KYYTPLVAEIVGLIHLQGGVLSKLGNNEIRMLDHFQMGANLVRGFATNGIGPRDISYWSM
HHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEC
SESGDSLGGTKYWGASFELQMPFWFLPKEVGLKGAVYADAGSLWGYQGPTSWAATGEVNS
CCCCCCCCCCEECCCEEEEECCCEECCHHHCCCEEEEECCCCCCCCCCCCCCEECCCCCC
SACPHCGLQYDDSKIVRSSVGVGLIWASPFGPLRFDYAIPLSKGKYDTVQEFKFGGGTSF
CCCCCCCCEECCHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MIRRWGTTIAKLLFAATLLASDVTSMAGVAAAQVASSASASIVVEGNRRVEADTIRSYFK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEECHHHHHHHCC
PGPDGRLDPSALDDGLKGLIATGLFQDVKINGAGGRLVVAVVENPVIGRVVFEGNKKIKD
CCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEECCCEEEEEEECCCCCCCH
EQLSAELQSRPRGALSRAVVQSDTLRIAEIYRRSGRYDVRVTPEVIDRPNGRVDLVFRVE
HHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECHHHHCCCCCCEEEEEEEC
EGAKTGVKSIEFVGNVAFSASRLRDVIRTRETNFLSFLASNDIYDPDRVEADRDLIRRFY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCHHHHHHHHHHHHHH
LKNGFADAQVVAALTEFDPDKKGFLITFKIEEGQQYRIGSVDFRANIPGFDPNWLRSYSR
HHCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEECEEEEECCCCCCCHHHHHHHHH
VKAGALYNVELLEKSVEEMQIEASRRGFSFAVVKPSGDRNFDSHTVSVTFNADEGARIYI
HHCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEE
ERIEIRGNTRTRDYVLRREFDVAEGDAYNRALVDRAERRLKNLDFFKSVKIVTEPGSSTD
EEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCC
RVILAVEVEEKSTGDFSVSGGYSTSDGALGEVSVSERNLMGRGLFGKVSVSYGQYSRGAS
EEEEEEEECCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCC
LSIVEPYLFDYRLALGLDLYYKQQLQNSYTSYDMTTLGFSPRLGIALREDLSLQLRYSLY
EEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCEEEEEHHH
QQKVTLSDAYNNCNNNAANTSLSYNPTPAYIKEVLGGVDPTNASGSSYYGYGCYADGETS
HHHEEHHHHHCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCC
LPVRKELADGAKITSSIGYTLNYNTLDNTKNPTDGLLLDLRQDFAGVGGDVTYLKTVGDA
CCHHHHHCCCCHHHHCCCEEEEECCCCCCCCCCCCEEEEEHHHHCCCCCCEEEEEECCCC
KYYTPLVAEIVGLIHLQGGVLSKLGNNEIRMLDHFQMGANLVRGFATNGIGPRDISYWSM
HHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEC
SESGDSLGGTKYWGASFELQMPFWFLPKEVGLKGAVYADAGSLWGYQGPTSWAATGEVNS
CCCCCCCCCCEECCCEEEEECCCEECCHHHCCCEEEEECCCCCCCCCCCCCCEECCCCCC
SACPHCGLQYDDSKIVRSSVGVGLIWASPFGPLRFDYAIPLSKGKYDTVQEFKFGGGTSF
CCCCCCCCEECCHHHHHHHCCEEEEEECCCCCEEEEEEEECCCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA