| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yheT [H]
Identifier: 86747875
GI number: 86747875
Start: 838580
End: 839605
Strand: Direct
Name: yheT [H]
Synonym: RPB_0749
Alternate gene names: 86747875
Gene position: 838580-839605 (Clockwise)
Preceding gene: 86747870
Following gene: 86747877
Centisome position: 15.73
GC content: 72.22
Gene sequence:
>1026_bases ATGCGCCATTATCGCGCGCCGTGGTGGCTGCCCGGCGGCCATCTGCAAACGATCTGGCCGGCGCTGGCCGCGCGGCCGCG GCCGGCCGAGGCGCTGCGGCTCGACCGCGAACGCTGGCGCGCGCCGGACGGTGATTTCATCGACGTCGATCATCTGCCGG GCGGCGCCGGCGCGCCGTGGCTGGTGCTGTTTCACGGCCTCGAAGGCTCGTCGTCGAGCCGCTACGCGATCGCCTTCGCG CAGGCGGCCCAGGCGCGCGGCTGGCGCTTCAGCATTCCGCATTTCCGCGGCTGCTCGGGCGAGATCAATCTGGCGCCGCG CTCCTATCACTCCGGCGATTTCGAGGAGATCGGCTGGATGCTGGGCCAGATCCGCGCGCGCGCCGACGCGCCGGTGTTCG CCGCCGGCGTGTCGCTCGGCGGCAACGCGCTGCTGCGCTGGACCGAGGAAGCCGGCGAGGGCGCGGCGCAAACCGTGCGC GCGGTGGCGGCGGTGTCGGCGCCGCTCGATCTGATCGCGGCGGGGGAAGCGATCGATCGGGGGCTGAACCGGCAGATCTA CACCCGCAACTTCCTGCGCACCATGAAGCCGCGCGCGCTGGCGAAATGGGCGCAGCATCCCGGCCTGTTCGACCGCGACA GGCTTGAAGCCGCCACCACGCTGCGCGCCTTCGACGACGCCTTCACGGCGCCGCTGCACGGCTTTGCCGACGTCGACGAT TACTGGACGCGGGCCTCGGCGCGGCCGCATCTGCACCGGATCCGCGTGCCGGCGCTGGTGCTGAATGCGCGCAACGATCC GTTCGTGCCGGGCGCCTCGCTGCCGGCGGCGCATCAGGTCGGCGACCATGTCACGCTGTGGCAGCCCGACGACGGCGGCC ATGTCGGCTTCGCCGCGGCGCCGTTCCCGGGGCATGTGCACACGATGCCGGAGGCGGTGTGCGACTGGCTCGGCGCGCTC GGCGAACCGCCGCCGGATCGCTCGCTTCAGAGCGTTTTCGAGCGAAGTGGATACCGGTTCGCGTGA
Upstream 100 bases:
>100_bases GTCCGATCCGGATTCGGCACGAAGGTATTGACGCTTCCCCGCCGGTGGCGGCAGGCTACCGGGGCGGTGTGCCCGCCCCG TGTCTCGAACGCTGACTCTC
Downstream 100 bases:
>100_bases AGAAAACGCGTCAAATCGAGAATCCAGAGCTCCGGTTCTGATTTTATCGGAACCGGGCTCTAGAACGGAATGCGCGCGAT GCCGCCGAGGTCGGACGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MRHYRAPWWLPGGHLQTIWPALAARPRPAEALRLDRERWRAPDGDFIDVDHLPGGAGAPWLVLFHGLEGSSSSRYAIAFA QAAQARGWRFSIPHFRGCSGEINLAPRSYHSGDFEEIGWMLGQIRARADAPVFAAGVSLGGNALLRWTEEAGEGAAQTVR AVAAVSAPLDLIAAGEAIDRGLNRQIYTRNFLRTMKPRALAKWAQHPGLFDRDRLEAATTLRAFDDAFTAPLHGFADVDD YWTRASARPHLHRIRVPALVLNARNDPFVPGASLPAAHQVGDHVTLWQPDDGGHVGFAAAPFPGHVHTMPEAVCDWLGAL GEPPPDRSLQSVFERSGYRFA
Sequences:
>Translated_341_residues MRHYRAPWWLPGGHLQTIWPALAARPRPAEALRLDRERWRAPDGDFIDVDHLPGGAGAPWLVLFHGLEGSSSSRYAIAFA QAAQARGWRFSIPHFRGCSGEINLAPRSYHSGDFEEIGWMLGQIRARADAPVFAAGVSLGGNALLRWTEEAGEGAAQTVR AVAAVSAPLDLIAAGEAIDRGLNRQIYTRNFLRTMKPRALAKWAQHPGLFDRDRLEAATTLRAFDDAFTAPLHGFADVDD YWTRASARPHLHRIRVPALVLNARNDPFVPGASLPAAHQVGDHVTLWQPDDGGHVGFAAAPFPGHVHTMPEAVCDWLGAL GEPPPDRSLQSVFERSGYRFA >Mature_341_residues MRHYRAPWWLPGGHLQTIWPALAARPRPAEALRLDRERWRAPDGDFIDVDHLPGGAGAPWLVLFHGLEGSSSSRYAIAFA QAAQARGWRFSIPHFRGCSGEINLAPRSYHSGDFEEIGWMLGQIRARADAPVFAAGVSLGGNALLRWTEEAGEGAAQTVR AVAAVSAPLDLIAAGEAIDRGLNRQIYTRNFLRTMKPRALAKWAQHPGLFDRDRLEAATTLRAFDDAFTAPLHGFADVDD YWTRASARPHLHRIRVPALVLNARNDPFVPGASLPAAHQVGDHVTLWQPDDGGHVGFAAAPFPGHVHTMPEAVCDWLGAL GEPPPDRSLQSVFERSGYRFA
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=334, Percent_Identity=26.3473053892216, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI194578891, Length=305, Percent_Identity=27.2131147540984, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI23397659, Length=279, Percent_Identity=25.8064516129032, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI23397661, Length=279, Percent_Identity=25.8064516129032, Blast_Score=92, Evalue=7e-19, Organism=Escherichia coli, GI1789752, Length=315, Percent_Identity=38.7301587301587, Blast_Score=184, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17566110, Length=309, Percent_Identity=28.8025889967638, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71985405, Length=314, Percent_Identity=27.3885350318471, Blast_Score=114, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6323866, Length=271, Percent_Identity=25.4612546125461, Blast_Score=93, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6319655, Length=306, Percent_Identity=23.8562091503268, Blast_Score=73, Evalue=5e-14, Organism=Drosophila melanogaster, GI24652003, Length=301, Percent_Identity=27.2425249169435, Blast_Score=107, Evalue=9e-24, Organism=Drosophila melanogaster, GI281398151, Length=301, Percent_Identity=27.2425249169435, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24581365, Length=316, Percent_Identity=23.1012658227848, Blast_Score=76, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 37380; Mature: 37380
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHYRAPWWLPGGHLQTIWPALAARPRPAEALRLDRERWRAPDGDFIDVDHLPGGAGAPW CCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC LVLFHGLEGSSSSRYAIAFAQAAQARGWRFSIPHFRGCSGEINLAPRSYHSGDFEEIGWM EEEEECCCCCCCCCEEEEEEHHHHCCCCEECCCCCCCCCCEEECCCCCCCCCCHHHHHHH LGQIRARADAPVFAAGVSLGGNALLRWTEEAGEGAAQTVRAVAAVSAPLDLIAAGEAIDR HHHHHHHCCCCEEEECCCCCCCEEEEECHHHCCCHHHHHHHHHHHHCCHHHHHCCHHHHH GLNRQIYTRNFLRTMKPRALAKWAQHPGLFDRDRLEAATTLRAFDDAFTAPLHGFADVDD CCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH YWTRASARPHLHRIRVPALVLNARNDPFVPGASLPAAHQVGDHVTLWQPDDGGHVGFAAA HHHHCCCCCCHHHEECCEEEEECCCCCCCCCCCCCHHHHCCCEEEEECCCCCCEEEEECC PFPGHVHTMPEAVCDWLGALGEPPPDRSLQSVFERSGYRFA CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure MRHYRAPWWLPGGHLQTIWPALAARPRPAEALRLDRERWRAPDGDFIDVDHLPGGAGAPW CCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC LVLFHGLEGSSSSRYAIAFAQAAQARGWRFSIPHFRGCSGEINLAPRSYHSGDFEEIGWM EEEEECCCCCCCCCEEEEEEHHHHCCCCEECCCCCCCCCCEEECCCCCCCCCCHHHHHHH LGQIRARADAPVFAAGVSLGGNALLRWTEEAGEGAAQTVRAVAAVSAPLDLIAAGEAIDR HHHHHHHCCCCEEEECCCCCCCEEEEECHHHCCCHHHHHHHHHHHHCCHHHHHCCHHHHH GLNRQIYTRNFLRTMKPRALAKWAQHPGLFDRDRLEAATTLRAFDDAFTAPLHGFADVDD CCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH YWTRASARPHLHRIRVPALVLNARNDPFVPGASLPAAHQVGDHVTLWQPDDGGHVGFAAA HHHHCCCCCCHHHEECCEEEEECCCCCCCCCCCCCHHHHCCCEEEEECCCCCCEEEEECC PFPGHVHTMPEAVCDWLGALGEPPPDRSLQSVFERSGYRFA CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]