| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is bluB [H]
Identifier: 86747869
GI number: 86747869
Start: 835478
End: 836149
Strand: Direct
Name: bluB [H]
Synonym: RPB_0743
Alternate gene names: 86747869
Gene position: 835478-836149 (Clockwise)
Preceding gene: 86747868
Following gene: 86747870
Centisome position: 15.67
GC content: 68.75
Gene sequence:
>672_bases ATGTCCGACGCGAAGGCGACCGTTGCCGCCGCCCCCAAGCCGCCGGTGTTCGACCCGGCGTTCCAGCAGAAATTCGCCGA ACTGATCGCGTGGCGTCGCGATGTGCGGCGCTTCCGTCCCGACCGAGTCGATCCGGCGCTGATCGAGCATCTGCTCGACC TCGCCCAGCTCGCGCCGTCGGTCGGCAACAGCCAGCCGTGGCGTTTCGTCAGCGTCGACAGTCCGGCGATGCGGACCAAG GTGCGGAACAACTTCCTGCGCTGCAACGAGACCGCCGCCGGCGCGTATCAGGGCGAGCGCGCCGCGCTGTATGCCCGGCT CAAGCTCGAAGGCATCGACGTCGCGCCGCGGCAGTTCGCGCTGTTCTGCGATCGCGCCACCGAGCAGGGCCAGGGCGTCG GTCGCCAGACCATGCCGGAGGCGCTGGACTACTCCGTCGTGGCGATGATCGAGACGTTCTGGCTGGCGGCGCGGGCGCTC GGCCTCGGTGTCGGCTGGGTGTCGATCCTCGATCCGCAGACGGTCACCGTCGATCTCGACGTGCCGCCGGATTGGAAGTT CATCGGCTATCTCTGCGTCGGCTGGCCGGTCGAGGAACACGTCGATCCGGAACTGGTACGACACAATTGGCAGGACCGCA CCCGCGCCGGCCGCGAGGTCCTGCAGCGCTGA
Upstream 100 bases:
>100_bases CCGCATCGCGGCTGCTGACCGACGTCGCCGATCTGTCCGACGTGCTGGCGGGCAAACTGTGAGCGCTCTCGAACACAAGG TGGATGCCAAGGTGGATGCC
Downstream 100 bases:
>100_bases GCACGGGCCCTGTGCGCAAGCGTACCAGCGCGCGGCGCGCGGTTCGGCGTATTTGCGGAGTATTAAGCAAAGCTATCCAG CAAGGCGGCCCGCCGTGCCG
Product: Cob(II)yrinic acid a,c-diamide reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MSDAKATVAAAPKPPVFDPAFQQKFAELIAWRRDVRRFRPDRVDPALIEHLLDLAQLAPSVGNSQPWRFVSVDSPAMRTK VRNNFLRCNETAAGAYQGERAALYARLKLEGIDVAPRQFALFCDRATEQGQGVGRQTMPEALDYSVVAMIETFWLAARAL GLGVGWVSILDPQTVTVDLDVPPDWKFIGYLCVGWPVEEHVDPELVRHNWQDRTRAGREVLQR
Sequences:
>Translated_223_residues MSDAKATVAAAPKPPVFDPAFQQKFAELIAWRRDVRRFRPDRVDPALIEHLLDLAQLAPSVGNSQPWRFVSVDSPAMRTK VRNNFLRCNETAAGAYQGERAALYARLKLEGIDVAPRQFALFCDRATEQGQGVGRQTMPEALDYSVVAMIETFWLAARAL GLGVGWVSILDPQTVTVDLDVPPDWKFIGYLCVGWPVEEHVDPELVRHNWQDRTRAGREVLQR >Mature_222_residues SDAKATVAAAPKPPVFDPAFQQKFAELIAWRRDVRRFRPDRVDPALIEHLLDLAQLAPSVGNSQPWRFVSVDSPAMRTKV RNNFLRCNETAAGAYQGERAALYARLKLEGIDVAPRQFALFCDRATEQGQGVGRQTMPEALDYSVVAMIETFWLAARALG LGVGWVSILDPQTVTVDLDVPPDWKFIGYLCVGWPVEEHVDPELVRHNWQDRTRAGREVLQR
Specific function: Maybe catalyzes the reduction of Co(2+) to Co(+) in cob(II)yrinic acid A,C-diamide to allow adenosylation to procede [H]
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012825 - InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: =1.16.8.1 [H]
Molecular weight: Translated: 25097; Mature: 24966
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAKATVAAAPKPPVFDPAFQQKFAELIAWRRDVRRFRPDRVDPALIEHLLDLAQLAPS CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC VGNSQPWRFVSVDSPAMRTKVRNNFLRCNETAAGAYQGERAALYARLKLEGIDVAPRQFA CCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEEEECCCCCCHHHHH LFCDRATEQGQGVGRQTMPEALDYSVVAMIETFWLAARALGLGVGWVSILDPQTVTVDLD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEEEC VPPDWKFIGYLCVGWPVEEHVDPELVRHNWQDRTRAGREVLQR CCCCCCEEEEEEECCCHHHCCCHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure SDAKATVAAAPKPPVFDPAFQQKFAELIAWRRDVRRFRPDRVDPALIEHLLDLAQLAPS CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC VGNSQPWRFVSVDSPAMRTKVRNNFLRCNETAAGAYQGERAALYARLKLEGIDVAPRQFA CCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEEEECCCCCCHHHHH LFCDRATEQGQGVGRQTMPEALDYSVVAMIETFWLAARALGLGVGWVSILDPQTVTVDLD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEEEEC VPPDWKFIGYLCVGWPVEEHVDPELVRHNWQDRTRAGREVLQR CCCCCCEEEEEEECCCHHHCCCHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7635831; 9256491 [H]