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The map label for this gene is hoxN [H]

Identifier: 86747857

GI number: 86747857

Start: 820978

End: 822066

Strand: Direct

Name: hoxN [H]

Synonym: RPB_0731

Alternate gene names: 86747857

Gene position: 820978-822066 (Clockwise)

Preceding gene: 86747856

Following gene: 86747858

Centisome position: 15.4

GC content: 66.48

Gene sequence:

>1089_bases
ATGTCCGAGACCATTGCCCGCGATATTCCTCCTCCCACCACCGCCGTTTCGCCCGCTTCCGATGGATTTCGATTTCGGCT
CGTCGCCCTGCTCGGCGGGCTGGTGATCGCCAACATCGCCGCCTGGGCCTGGGCGCTGACCGCCTTCGCCGGGCAGCCGG
TGCTGATCGGCACCGCGGTCCTCGCCTACAGCCTCGGCCTGCGCCACGCGCTCGACGCCGATCACATCGCGGCGATCGAC
AACGTCACCCGCAAGCTGATGCAGGAGGGCAAGCGGCCGGTCGCGGTCGGCTTCTTCTTCGCGCTCGGCCATTCCACCGT
GGTGCTGGTGGCGTCGCTGGCGATCGCGCTGGCGGCCAATTCGCTGACCGAGCGGTTCTCCGGCTATCGCGAGATCGGCG
GCGTGATCGGCACCTCGGCCTCCGCGCTGTTCCTGTTCGCGATCGCGATCGCGAATCTGGTGGTGCTGAGCGGTGTCTAT
CGCGCGTTCAAGAAAGTTCGTGCCGGCGAAGTGGTTCACGACGCCGACATCGACGCGCTGCTGCAGCAGCGCGGCTGGCT
GGCGCGGCTGTTCCGGCCGCTGTTCCGCTTCGTGTCCAAGAGCTGGCATCTGTATCCGATCGGGCTGTTGTTCGCGCTCG
GCTTCGAGACCGCCAGCGAGATCAGCCTGTTCGGCCTCGCCGCCAACGCCTCGGGGTCGATCTCGCACTGGTCGATCCTG
GTGTTTCCGGCGCTGTTCGCCGCCGGCATGACGCTGGTCGACACGCTCGACGGCGTGCTGATGCTCGGCGCCTATGGCTG
GGCGTATCGCAACCCGGTGCGCAAGCTGTACTACAACATGACCATCACCTCGGTCTCGGTGCTGGTCGCGATCGTGATCG
GCGGCATCGAGACGCTCGGGCTGCTGGGCGGGCGGCTGCATCTCGAAGGCGCGTTCTGGGAGTGGATCTCCGAGCTCAAC
GAGAATCTCGGCGTGCTCGGCTACGGCATCGTCGGCCTGTTCGTCGCGAGCTGGATCGTCTCGACCATCATCTACCGCGC
CAATGGCTATCACCGGCTCGACGAACGCGCGCCCGTCGTGCAGAAATGA

Upstream 100 bases:

>100_bases
AGACCGGCCTGAGCCACGTCATCTTCCAGCGTGCGGTGCGCGCGGCTGGGGCGGTCCGCCGCATGGGTGACAGGAAACTG
CTCACCGTTCGGGGACCCCG

Downstream 100 bases:

>100_bases
CCGCCATATGACGATGCGTCCAAATCCCGCGTCACGCGCGGCGGCGGTCACGGCCGCGCTCATGATCGTGGTCGGCCTGC
TCGCGCTCGGCTCGCTCGGC

Product: high-affinity nickel-transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MSETIARDIPPPTTAVSPASDGFRFRLVALLGGLVIANIAAWAWALTAFAGQPVLIGTAVLAYSLGLRHALDADHIAAID
NVTRKLMQEGKRPVAVGFFFALGHSTVVLVASLAIALAANSLTERFSGYREIGGVIGTSASALFLFAIAIANLVVLSGVY
RAFKKVRAGEVVHDADIDALLQQRGWLARLFRPLFRFVSKSWHLYPIGLLFALGFETASEISLFGLAANASGSISHWSIL
VFPALFAAGMTLVDTLDGVLMLGAYGWAYRNPVRKLYYNMTITSVSVLVAIVIGGIETLGLLGGRLHLEGAFWEWISELN
ENLGVLGYGIVGLFVASWIVSTIIYRANGYHRLDERAPVVQK

Sequences:

>Translated_362_residues
MSETIARDIPPPTTAVSPASDGFRFRLVALLGGLVIANIAAWAWALTAFAGQPVLIGTAVLAYSLGLRHALDADHIAAID
NVTRKLMQEGKRPVAVGFFFALGHSTVVLVASLAIALAANSLTERFSGYREIGGVIGTSASALFLFAIAIANLVVLSGVY
RAFKKVRAGEVVHDADIDALLQQRGWLARLFRPLFRFVSKSWHLYPIGLLFALGFETASEISLFGLAANASGSISHWSIL
VFPALFAAGMTLVDTLDGVLMLGAYGWAYRNPVRKLYYNMTITSVSVLVAIVIGGIETLGLLGGRLHLEGAFWEWISELN
ENLGVLGYGIVGLFVASWIVSTIIYRANGYHRLDERAPVVQK
>Mature_361_residues
SETIARDIPPPTTAVSPASDGFRFRLVALLGGLVIANIAAWAWALTAFAGQPVLIGTAVLAYSLGLRHALDADHIAAIDN
VTRKLMQEGKRPVAVGFFFALGHSTVVLVASLAIALAANSLTERFSGYREIGGVIGTSASALFLFAIAIANLVVLSGVYR
AFKKVRAGEVVHDADIDALLQQRGWLARLFRPLFRFVSKSWHLYPIGLLFALGFETASEISLFGLAANASGSISHWSILV
FPALFAAGMTLVDTLDGVLMLGAYGWAYRNPVRKLYYNMTITSVSVLVAIVIGGIETLGLLGGRLHLEGAFWEWISELNE
NLGVLGYGIVGLFVASWIVSTIIYRANGYHRLDERAPVVQK

Specific function: High-affinity nickel transporter responsible for nickel uptake. Necessary for high levels of activity of hydrogenase and urease [H]

COG id: COG3376

COG function: function code P; High-affinity nickel permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004688
- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 38947; Mature: 38816

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETIARDIPPPTTAVSPASDGFRFRLVALLGGLVIANIAAWAWALTAFAGQPVLIGTAV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAYSLGLRHALDADHIAAIDNVTRKLMQEGKRPVAVGFFFALGHSTVVLVASLAIALAAN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
SLTERFSGYREIGGVIGTSASALFLFAIAIANLVVLSGVYRAFKKVRAGEVVHDADIDAL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LQQRGWLARLFRPLFRFVSKSWHLYPIGLLFALGFETASEISLFGLAANASGSISHWSIL
HHHCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCHHHHEEEEEEECCCCCCHHHHHH
VFPALFAAGMTLVDTLDGVLMLGAYGWAYRNPVRKLYYNMTITSVSVLVAIVIGGIETLG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGGRLHLEGAFWEWISELNENLGVLGYGIVGLFVASWIVSTIIYRANGYHRLDERAPVV
HHCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QK
CC
>Mature Secondary Structure 
SETIARDIPPPTTAVSPASDGFRFRLVALLGGLVIANIAAWAWALTAFAGQPVLIGTAV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAYSLGLRHALDADHIAAIDNVTRKLMQEGKRPVAVGFFFALGHSTVVLVASLAIALAAN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
SLTERFSGYREIGGVIGTSASALFLFAIAIANLVVLSGVYRAFKKVRAGEVVHDADIDAL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LQQRGWLARLFRPLFRFVSKSWHLYPIGLLFALGFETASEISLFGLAANASGSISHWSIL
HHHCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCHHHHEEEEEEECCCCCCHHHHHH
VFPALFAAGMTLVDTLDGVLMLGAYGWAYRNPVRKLYYNMTITSVSVLVAIVIGGIETLG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGGRLHLEGAFWEWISELNENLGVLGYGIVGLFVASWIVSTIIYRANGYHRLDERAPVV
HHCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1847142; 7896709; 12948488; 7934894 [H]