| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is hsaA [H]
Identifier: 86747822
GI number: 86747822
Start: 782939
End: 784159
Strand: Direct
Name: hsaA [H]
Synonym: RPB_0696
Alternate gene names: 86747822
Gene position: 782939-784159 (Clockwise)
Preceding gene: 86747821
Following gene: 86747823
Centisome position: 14.68
GC content: 65.52
Gene sequence:
>1221_bases ATGAACCACATGAATGTGTCCAAGGGCGAATCCTGGAGCGGGTCGCGCGCGTCCGACTTCGACTACAGGGCCGCGGCTCG CGCGATCCTGCCACGCCTGGCCGCGACGTCGGACAGCAGCGAGCGCCTGCGCAGGCTGGACGACGATGCCGCCGCGGCAC TCCGCGGATCGGGCCTGGCCCGCGTTCTGACGCCGAAGAAATTCGGCGGCTTCGAGCTCTCCCCAAGCGCCCACATCTGG ACCTGTGCGGAACTCGCCCAGGGCTGTTCGGCCGCAAGCTGGGTGTTGATGGTTTGTGTGGCCCACGACTACATCGTCGG ACGGTTCTCGGAAGAGTGCCAGAAGGAAGTCTATGACGGCGACGCCGACAACCTGCTCGCCGGCGCCCTGGCTCCGCAGG GCACGATCGAACGCACCGCCGGCGGTTGGCGTCTCAATGGGCGTTGGCAATTCGGCAGCGGCTGCGACCATTCTCCCTGG TTCATTCTCGGCACCAAGGTGGTCAATCCGGACTCGGGCGGCTATCTCAACTACCATGTGATGGTGCCGCGGGCGGACAT CGAGATCGACGATACGTGGTACACGCTCGGCATGCGCGGAACAGGATCGAAAGATCTCGTCGCACGCGATGTGCTCGTGC CCGACTATCGGGCGATGCCGACCTATCCGACCTTCATGGGGTCGACCCCGCATACGAACAGTCCCGTCTATCGCTTGCCC GTCTATGCCGGTCTTTCGTCGATGCTGTCGGGCACCGTGCTCGGGATGGCGGAGCGCGGCTTGAAGCACTTCATCGAGCG GACCTCCGCCCGCAGGACCGCCCATGGCGTATCGAAGGCGGAGAACGCCAACATGCAACAACGAGTGGCGGAGTCGACGG CCGAAGTCGCCGCCGCCCGGCGGCTGCTGGAAAACATCTGCGAGCGCTTCGATCAGGCGATGGTTGCCGACCAGGGGCCG ATGTCCGCCAGCGACCGCGTCCAGTTCCGGTGGGACGCGGCCTATGTCGTCGAACTGAGCCGACGGGCGATCGATCGGGT GTTCGCCGCTTCCGGCGCACACGGAGTCTACGAGGGCAGCCCGGTGTATCGCGCCTACCGCGATATCAACACGGCCTGCC ATCACGCGGTGATCGACTTCGACACGGTCTCTGGATTACGCGGGCAGATCGCCCTGCTCGGCGACATCGGCGAGAACCCC CGTTCGGTGCCTCTCGCCTAG
Upstream 100 bases:
>100_bases GAGGGCGTGGCGACGGCTGCGCTTGAAGATCGCAAAAGCAGTCGGGCGACACGACGACGGCGACCGAATTTGTCTCGAAA GATCATAGAGGAGTACTCGA
Downstream 100 bases:
>100_bases CGGCTTCCAAGCCGCCCTGGTCCGGATGGAGCATGGCACGACGGCGGGGAAACGCGGCCCCGCGCGGACTTGCTCTATCC GGCCTCTCGCAGATCGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: 3-hydroxy-9,10-seconandrost-1,3,5(10)-triene-9,17-dione 4-hydroxylase [H]
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MNHMNVSKGESWSGSRASDFDYRAAARAILPRLAATSDSSERLRRLDDDAAAALRGSGLARVLTPKKFGGFELSPSAHIW TCAELAQGCSAASWVLMVCVAHDYIVGRFSEECQKEVYDGDADNLLAGALAPQGTIERTAGGWRLNGRWQFGSGCDHSPW FILGTKVVNPDSGGYLNYHVMVPRADIEIDDTWYTLGMRGTGSKDLVARDVLVPDYRAMPTYPTFMGSTPHTNSPVYRLP VYAGLSSMLSGTVLGMAERGLKHFIERTSARRTAHGVSKAENANMQQRVAESTAEVAAARRLLENICERFDQAMVADQGP MSASDRVQFRWDAAYVVELSRRAIDRVFAASGAHGVYEGSPVYRAYRDINTACHHAVIDFDTVSGLRGQIALLGDIGENP RSVPLA
Sequences:
>Translated_406_residues MNHMNVSKGESWSGSRASDFDYRAAARAILPRLAATSDSSERLRRLDDDAAAALRGSGLARVLTPKKFGGFELSPSAHIW TCAELAQGCSAASWVLMVCVAHDYIVGRFSEECQKEVYDGDADNLLAGALAPQGTIERTAGGWRLNGRWQFGSGCDHSPW FILGTKVVNPDSGGYLNYHVMVPRADIEIDDTWYTLGMRGTGSKDLVARDVLVPDYRAMPTYPTFMGSTPHTNSPVYRLP VYAGLSSMLSGTVLGMAERGLKHFIERTSARRTAHGVSKAENANMQQRVAESTAEVAAARRLLENICERFDQAMVADQGP MSASDRVQFRWDAAYVVELSRRAIDRVFAASGAHGVYEGSPVYRAYRDINTACHHAVIDFDTVSGLRGQIALLGDIGENP RSVPLA >Mature_406_residues MNHMNVSKGESWSGSRASDFDYRAAARAILPRLAATSDSSERLRRLDDDAAAALRGSGLARVLTPKKFGGFELSPSAHIW TCAELAQGCSAASWVLMVCVAHDYIVGRFSEECQKEVYDGDADNLLAGALAPQGTIERTAGGWRLNGRWQFGSGCDHSPW FILGTKVVNPDSGGYLNYHVMVPRADIEIDDTWYTLGMRGTGSKDLVARDVLVPDYRAMPTYPTFMGSTPHTNSPVYRLP VYAGLSSMLSGTVLGMAERGLKHFIERTSARRTAHGVSKAENANMQQRVAESTAEVAAARRLLENICERFDQAMVADQGP MSASDRVQFRWDAAYVVELSRRAIDRVFAASGAHGVYEGSPVYRAYRDINTACHHAVIDFDTVSGLRGQIALLGDIGENP RSVPLA
Specific function: Catalyzes the o-hydroxylation of 3-hydroxy-9,10- seconandrost-1,3,5(10)-triene-9,17-dione (3-HSA) to 3,4-dihydroxy- 9,10-seconandrost-1,3,5(10)-triene-9,17-dione (3,4-DHSA) in the catabolism of cholesterol [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FADH(2)-utilizing monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013107 - InterPro: IPR006092 - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR013786 - InterPro: IPR009100 [H]
Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02771 Acyl-CoA_dh_N [H]
EC number: NA
Molecular weight: Translated: 44257; Mature: 44257
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHMNVSKGESWSGSRASDFDYRAAARAILPRLAATSDSSERLRRLDDDAAAALRGSGLA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCE RVLTPKKFGGFELSPSAHIWTCAELAQGCSAASWVLMVCVAHDYIVGRFSEECQKEVYDG EEECCCCCCCEEECCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DADNLLAGALAPQGTIERTAGGWRLNGRWQFGSGCDHSPWFILGTKVVNPDSGGYLNYHV CHHHHHHHHCCCCCCCCCCCCCEEECCEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEE MVPRADIEIDDTWYTLGMRGTGSKDLVARDVLVPDYRAMPTYPTFMGSTPHTNSPVYRLP EEECCCEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCEEEEH VYAGLSSMLSGTVLGMAERGLKHFIERTSARRTAHGVSKAENANMQQRVAESTAEVAAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHH RLLENICERFDQAMVADQGPMSASDRVQFRWDAAYVVELSRRAIDRVFAASGAHGVYEGS HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCC PVYRAYRDINTACHHAVIDFDTVSGLRGQIALLGDIGENPRSVPLA HHHHHHHHHHHHHHHHEEEHHHHCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure MNHMNVSKGESWSGSRASDFDYRAAARAILPRLAATSDSSERLRRLDDDAAAALRGSGLA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCE RVLTPKKFGGFELSPSAHIWTCAELAQGCSAASWVLMVCVAHDYIVGRFSEECQKEVYDG EEECCCCCCCEEECCCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DADNLLAGALAPQGTIERTAGGWRLNGRWQFGSGCDHSPWFILGTKVVNPDSGGYLNYHV CHHHHHHHHCCCCCCCCCCCCCEEECCEEECCCCCCCCCEEEEEEEEECCCCCCEEEEEE MVPRADIEIDDTWYTLGMRGTGSKDLVARDVLVPDYRAMPTYPTFMGSTPHTNSPVYRLP EEECCCEEECCCEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCEEEEH VYAGLSSMLSGTVLGMAERGLKHFIERTSARRTAHGVSKAENANMQQRVAESTAEVAAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHH RLLENICERFDQAMVADQGPMSASDRVQFRWDAAYVVELSRRAIDRVFAASGAHGVYEGS HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCC PVYRAYRDINTACHHAVIDFDTVSGLRGQIALLGDIGENPRSVPLA HHHHHHHHHHHHHHHHEEEHHHHCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA