Definition Rhodopseudomonas palustris HaA2, complete genome.
Accession NC_007778
Length 5,331,656

Click here to switch to the map view.

The map label for this gene is yihV [H]

Identifier: 86747797

GI number: 86747797

Start: 755460

End: 756389

Strand: Direct

Name: yihV [H]

Synonym: RPB_0671

Alternate gene names: 86747797

Gene position: 755460-756389 (Clockwise)

Preceding gene: 86747796

Following gene: 86747799

Centisome position: 14.17

GC content: 68.39

Gene sequence:

>930_bases
ATGACGAACACCGCAAAGCCCAAGCCGCGGATTCTCTGCGTCGGCATTCCGGTCCGCGACCTCACCTTCCGGATCGAGGC
GGTGCCGGGCCGCGGCAACAAGATCCCCGCCAGTGCTTATGAAGAGATCTGCGGCGGCAATGCGCTCAATGCCGGGATAG
GCATCGCGAGGCTCGGCGGCACCGCGACGATGTGCGGCCCGATGGGCGACGCGAGCGAAATCGCGGGGCGCTTCATCTTC
GACAAGCTCGGCGAGGAAGGCATCGCGACCACCGGCCTGATCCACATGCCGGGGCTGGTGACGCCGATTTCCGCCGTGAT
GGTCGATCCGACCGGCGAGCGCACCATCGTCACCTTCCGTGATCCGCGACTGTGGAACGTCGCGTTGCCGGACGCCGATG
CGCTGCTCGAGAACTGCGACGCCATCATGATCGAGAGCCGCTGCGCCGGCTTCGCCACGCCGCTGTGCGCCGAGGCGACC
AGGCGCGGGATTCCGGTGGTGGTCGATATCGACAGCGCGATGGCGATGAACGAGGGCCTGCTGACGGCGTCGTCGCATCT
GATCTTTTCGGCCGAAGCGCTGCACGCCACCGCCGGCGTCGCCGACGACGAAGCCGCGCTGACCAAGGTGGCGAAGCTGA
CGCATGCCTTCGTGGCCGTCACCCGCGGCCCGAAGGGGACGCTGTGGCTCGACGCCGACAAACAATTTCAGCAGACCCCG
GCGTTCCCGGTGCACGTCGTCGACACGCTCGGCGCCGGCGACATCTTCCACGGCGGCTTCGCGGTGGCGTTCAGCGAGGG
CCAGGACATTCCGAGCGCGCTGCGCTTCGCCTCCGCCGCGGCCGCGCTGAAATGCACCAGGCCCGGCGGCGCCTTCGCCT
GCCCGGACCGCGCCGAGGTCGAGGCGTTTCTCGCCGACAAGCGGAAGTAA

Upstream 100 bases:

>100_bases
CCGCCGCGATGCTCAATCGCCAGCATCCGGACGGCCTGGTCGGGCCGCACCCGTTCGCGATCGCGCATCATCTGGTCGGC
CGCTGGCTGGAGCAGACATC

Downstream 100 bases:

>100_bases
TCAGCCGCGGCGCACGCGCGCGCAACGCCGCAGCCGTCTCGTGAGGCGCGGCTTCAGCCCGACGCGACCTCGTCGATTTT
GAAGGCGCGCGAGGCGAACA

Product: PfkB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTNTAKPKPRILCVGIPVRDLTFRIEAVPGRGNKIPASAYEEICGGNALNAGIGIARLGGTATMCGPMGDASEIAGRFIF
DKLGEEGIATTGLIHMPGLVTPISAVMVDPTGERTIVTFRDPRLWNVALPDADALLENCDAIMIESRCAGFATPLCAEAT
RRGIPVVVDIDSAMAMNEGLLTASSHLIFSAEALHATAGVADDEAALTKVAKLTHAFVAVTRGPKGTLWLDADKQFQQTP
AFPVHVVDTLGAGDIFHGGFAVAFSEGQDIPSALRFASAAAALKCTRPGGAFACPDRAEVEAFLADKRK

Sequences:

>Translated_309_residues
MTNTAKPKPRILCVGIPVRDLTFRIEAVPGRGNKIPASAYEEICGGNALNAGIGIARLGGTATMCGPMGDASEIAGRFIF
DKLGEEGIATTGLIHMPGLVTPISAVMVDPTGERTIVTFRDPRLWNVALPDADALLENCDAIMIESRCAGFATPLCAEAT
RRGIPVVVDIDSAMAMNEGLLTASSHLIFSAEALHATAGVADDEAALTKVAKLTHAFVAVTRGPKGTLWLDADKQFQQTP
AFPVHVVDTLGAGDIFHGGFAVAFSEGQDIPSALRFASAAAALKCTRPGGAFACPDRAEVEAFLADKRK
>Mature_308_residues
TNTAKPKPRILCVGIPVRDLTFRIEAVPGRGNKIPASAYEEICGGNALNAGIGIARLGGTATMCGPMGDASEIAGRFIFD
KLGEEGIATTGLIHMPGLVTPISAVMVDPTGERTIVTFRDPRLWNVALPDADALLENCDAIMIESRCAGFATPLCAEATR
RGIPVVVDIDSAMAMNEGLLTASSHLIFSAEALHATAGVADDEAALTKVAKLTHAFVAVTRGPKGTLWLDADKQFQQTPA
FPVHVVDTLGAGDIFHGGFAVAFSEGQDIPSALRFASAAAALKCTRPGGAFACPDRAEVEAFLADKRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87082343, Length=300, Percent_Identity=36.6666666666667, Blast_Score=160, Evalue=9e-41,
Organism=Escherichia coli, GI87081971, Length=315, Percent_Identity=27.9365079365079, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1790193, Length=313, Percent_Identity=27.1565495207668, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 32271; Mature: 32140

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTAKPKPRILCVGIPVRDLTFRIEAVPGRGNKIPASAYEEICGGNALNAGIGIARLGG
CCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEECCC
TATMCGPMGDASEIAGRFIFDKLGEEGIATTGLIHMPGLVTPISAVMVDPTGERTIVTFR
CEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEC
DPRLWNVALPDADALLENCDAIMIESRCAGFATPLCAEATRRGIPVVVDIDSAMAMNEGL
CCEEEEEECCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCHHHHCCCC
LTASSHLIFSAEALHATAGVADDEAALTKVAKLTHAFVAVTRGPKGTLWLDADKQFQQTP
EEECCCEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEECCCHHHHHCC
AFPVHVVDTLGAGDIFHGGFAVAFSEGQDIPSALRFASAAAALKCTRPGGAFACPDRAEV
CCEEEEEECCCCCCEECCCEEEEECCCCCCHHHHHHHHHHHEEEEECCCCCEECCCHHHH
EAFLADKRK
HHHHHCCCC
>Mature Secondary Structure 
TNTAKPKPRILCVGIPVRDLTFRIEAVPGRGNKIPASAYEEICGGNALNAGIGIARLGG
CCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEECCC
TATMCGPMGDASEIAGRFIFDKLGEEGIATTGLIHMPGLVTPISAVMVDPTGERTIVTFR
CEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEC
DPRLWNVALPDADALLENCDAIMIESRCAGFATPLCAEATRRGIPVVVDIDSAMAMNEGL
CCEEEEEECCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCHHHHCCCC
LTASSHLIFSAEALHATAGVADDEAALTKVAKLTHAFVAVTRGPKGTLWLDADKQFQQTP
EEECCCEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEECCCHHHHHCC
AFPVHVVDTLGAGDIFHGGFAVAFSEGQDIPSALRFASAAAALKCTRPGGAFACPDRAEV
CCEEEEEECCCCCCEECCCEEEEECCCCCCHHHHHHHHHHHEEEEECCCCCEECCCHHHH
EAFLADKRK
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]