| Definition | Rhodopseudomonas palustris HaA2, complete genome. |
|---|---|
| Accession | NC_007778 |
| Length | 5,331,656 |
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The map label for this gene is yihV [H]
Identifier: 86747797
GI number: 86747797
Start: 755460
End: 756389
Strand: Direct
Name: yihV [H]
Synonym: RPB_0671
Alternate gene names: 86747797
Gene position: 755460-756389 (Clockwise)
Preceding gene: 86747796
Following gene: 86747799
Centisome position: 14.17
GC content: 68.39
Gene sequence:
>930_bases ATGACGAACACCGCAAAGCCCAAGCCGCGGATTCTCTGCGTCGGCATTCCGGTCCGCGACCTCACCTTCCGGATCGAGGC GGTGCCGGGCCGCGGCAACAAGATCCCCGCCAGTGCTTATGAAGAGATCTGCGGCGGCAATGCGCTCAATGCCGGGATAG GCATCGCGAGGCTCGGCGGCACCGCGACGATGTGCGGCCCGATGGGCGACGCGAGCGAAATCGCGGGGCGCTTCATCTTC GACAAGCTCGGCGAGGAAGGCATCGCGACCACCGGCCTGATCCACATGCCGGGGCTGGTGACGCCGATTTCCGCCGTGAT GGTCGATCCGACCGGCGAGCGCACCATCGTCACCTTCCGTGATCCGCGACTGTGGAACGTCGCGTTGCCGGACGCCGATG CGCTGCTCGAGAACTGCGACGCCATCATGATCGAGAGCCGCTGCGCCGGCTTCGCCACGCCGCTGTGCGCCGAGGCGACC AGGCGCGGGATTCCGGTGGTGGTCGATATCGACAGCGCGATGGCGATGAACGAGGGCCTGCTGACGGCGTCGTCGCATCT GATCTTTTCGGCCGAAGCGCTGCACGCCACCGCCGGCGTCGCCGACGACGAAGCCGCGCTGACCAAGGTGGCGAAGCTGA CGCATGCCTTCGTGGCCGTCACCCGCGGCCCGAAGGGGACGCTGTGGCTCGACGCCGACAAACAATTTCAGCAGACCCCG GCGTTCCCGGTGCACGTCGTCGACACGCTCGGCGCCGGCGACATCTTCCACGGCGGCTTCGCGGTGGCGTTCAGCGAGGG CCAGGACATTCCGAGCGCGCTGCGCTTCGCCTCCGCCGCGGCCGCGCTGAAATGCACCAGGCCCGGCGGCGCCTTCGCCT GCCCGGACCGCGCCGAGGTCGAGGCGTTTCTCGCCGACAAGCGGAAGTAA
Upstream 100 bases:
>100_bases CCGCCGCGATGCTCAATCGCCAGCATCCGGACGGCCTGGTCGGGCCGCACCCGTTCGCGATCGCGCATCATCTGGTCGGC CGCTGGCTGGAGCAGACATC
Downstream 100 bases:
>100_bases TCAGCCGCGGCGCACGCGCGCGCAACGCCGCAGCCGTCTCGTGAGGCGCGGCTTCAGCCCGACGCGACCTCGTCGATTTT GAAGGCGCGCGAGGCGAACA
Product: PfkB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTNTAKPKPRILCVGIPVRDLTFRIEAVPGRGNKIPASAYEEICGGNALNAGIGIARLGGTATMCGPMGDASEIAGRFIF DKLGEEGIATTGLIHMPGLVTPISAVMVDPTGERTIVTFRDPRLWNVALPDADALLENCDAIMIESRCAGFATPLCAEAT RRGIPVVVDIDSAMAMNEGLLTASSHLIFSAEALHATAGVADDEAALTKVAKLTHAFVAVTRGPKGTLWLDADKQFQQTP AFPVHVVDTLGAGDIFHGGFAVAFSEGQDIPSALRFASAAAALKCTRPGGAFACPDRAEVEAFLADKRK
Sequences:
>Translated_309_residues MTNTAKPKPRILCVGIPVRDLTFRIEAVPGRGNKIPASAYEEICGGNALNAGIGIARLGGTATMCGPMGDASEIAGRFIF DKLGEEGIATTGLIHMPGLVTPISAVMVDPTGERTIVTFRDPRLWNVALPDADALLENCDAIMIESRCAGFATPLCAEAT RRGIPVVVDIDSAMAMNEGLLTASSHLIFSAEALHATAGVADDEAALTKVAKLTHAFVAVTRGPKGTLWLDADKQFQQTP AFPVHVVDTLGAGDIFHGGFAVAFSEGQDIPSALRFASAAAALKCTRPGGAFACPDRAEVEAFLADKRK >Mature_308_residues TNTAKPKPRILCVGIPVRDLTFRIEAVPGRGNKIPASAYEEICGGNALNAGIGIARLGGTATMCGPMGDASEIAGRFIFD KLGEEGIATTGLIHMPGLVTPISAVMVDPTGERTIVTFRDPRLWNVALPDADALLENCDAIMIESRCAGFATPLCAEATR RGIPVVVDIDSAMAMNEGLLTASSHLIFSAEALHATAGVADDEAALTKVAKLTHAFVAVTRGPKGTLWLDADKQFQQTPA FPVHVVDTLGAGDIFHGGFAVAFSEGQDIPSALRFASAAAALKCTRPGGAFACPDRAEVEAFLADKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082343, Length=300, Percent_Identity=36.6666666666667, Blast_Score=160, Evalue=9e-41, Organism=Escherichia coli, GI87081971, Length=315, Percent_Identity=27.9365079365079, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1790193, Length=313, Percent_Identity=27.1565495207668, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 32271; Mature: 32140
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTAKPKPRILCVGIPVRDLTFRIEAVPGRGNKIPASAYEEICGGNALNAGIGIARLGG CCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEECCC TATMCGPMGDASEIAGRFIFDKLGEEGIATTGLIHMPGLVTPISAVMVDPTGERTIVTFR CEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEC DPRLWNVALPDADALLENCDAIMIESRCAGFATPLCAEATRRGIPVVVDIDSAMAMNEGL CCEEEEEECCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCHHHHCCCC LTASSHLIFSAEALHATAGVADDEAALTKVAKLTHAFVAVTRGPKGTLWLDADKQFQQTP EEECCCEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEECCCHHHHHCC AFPVHVVDTLGAGDIFHGGFAVAFSEGQDIPSALRFASAAAALKCTRPGGAFACPDRAEV CCEEEEEECCCCCCEECCCEEEEECCCCCCHHHHHHHHHHHEEEEECCCCCEECCCHHHH EAFLADKRK HHHHHCCCC >Mature Secondary Structure TNTAKPKPRILCVGIPVRDLTFRIEAVPGRGNKIPASAYEEICGGNALNAGIGIARLGG CCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEEECCC TATMCGPMGDASEIAGRFIFDKLGEEGIATTGLIHMPGLVTPISAVMVDPTGERTIVTFR CEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEECCCCCEEEEEEC DPRLWNVALPDADALLENCDAIMIESRCAGFATPLCAEATRRGIPVVVDIDSAMAMNEGL CCEEEEEECCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCHHHHCCCC LTASSHLIFSAEALHATAGVADDEAALTKVAKLTHAFVAVTRGPKGTLWLDADKQFQQTP EEECCCEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCCEEECCCHHHHHCC AFPVHVVDTLGAGDIFHGGFAVAFSEGQDIPSALRFASAAAALKCTRPGGAFACPDRAEV CCEEEEEECCCCCCEECCCEEEEECCCCCCHHHHHHHHHHHEEEEECCCCCEECCCHHHH EAFLADKRK HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]